RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 RASSF4Q9H2L5 321 aa12.82□□□□□ -0.36
SND1-201ENST00000354725 REC8O95072 547 aa12.82□□□□□ -0.36
SND1-201ENST00000354725 CCT4P50991 539 aaKnown RBP12.82□□□□□ -0.36
SND1-201ENST00000354725 MCM10Q7L590 875 aa12.82□□□□□ -0.36
SND1-201ENST00000354725 ZGPATQ8N5A5 531 aaKnown RBP12.82□□□□□ -0.36
SND1-201ENST00000354725 GOLGA6L22H0YM25 854 aa12.81□□□□□ -0.36
SND1-201ENST00000354725 HTATSF1O43719 755 aaKnown RBP12.81□□□□□ -0.36
SND1-201ENST00000354725 OTUD6BQ8N6M0 293 aa12.81□□□□□ -0.36
SND1-201ENST00000354725 RAPGEF4Q8WZA2 1011 aa12.81□□□□□ -0.36
SND1-201ENST00000354725 INTS4Q96HW7 963 aaKnown RBP12.81□□□□□ -0.36
SND1-201ENST00000354725 MAP3K5Q99683 1374 aa12.81□□□□□ -0.36
SND1-201ENST00000354725 FOXD4L1Q9NU39 408 aa12.81□□□□□ -0.36
SND1-201ENST00000354725 ST18O60284 1047 aa12.8□□□□□ -0.36
SND1-201ENST00000354725 HNRNPH2P55795 449 aaKnown RBP12.8□□□□□ -0.36
SND1-201ENST00000354725 AKAP4Q5JQC9 854 aa12.8□□□□□ -0.36
SND1-201ENST00000354725 DDX41Q9UJV9 622 aaKnown RBP12.8□□□□□ -0.36
SND1-201ENST00000354725 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
SND1-201ENST00000354725 DDX49Q9Y6V7 483 aaKnown RBP12.8□□□□□ -0.36
SND1-201ENST00000354725 G2E3Q7L622 706 aa12.8□□□□□ -0.36
SND1-201ENST00000354725 RBSNQ9H1K0 784 aa12.8□□□□□ -0.36
SND1-201ENST00000354725 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
SND1-201ENST00000354725 MORC2Q9Y6X9 1032 aaPredicted RBP12.8□□□□□ -0.36
SND1-201ENST00000354725 FAM182BQ5T319 152 aa12.79□□□□□ -0.36
SND1-201ENST00000354725 BABAM1Q9NWV8 329 aa12.79□□□□□ -0.36
SND1-201ENST00000354725 NBPF9Q3BBW0 867 aa12.79□□□□□ -0.36
SND1-201ENST00000354725 PLEKHO1Q53GL0 409 aaPredicted RBP12.79□□□□□ -0.36
SND1-201ENST00000354725 DNAJC21Q5F1R6 531 aaKnown RBP12.79□□□□□ -0.36
SND1-201ENST00000354725 ESYT1Q9BSJ8 1104 aa12.79□□□□□ -0.36
SND1-201ENST00000354725 CASZ1Q86V15 1759 aa12.79□□□□□ -0.36
SND1-201ENST00000354725 TPD52L2O43399 206 aaKnown RBP12.79□□□□□ -0.36
SND1-201ENST00000354725 FAM196AQ6ZSG2 479 aa12.79□□□□□ -0.36
SND1-201ENST00000354725 TSHZ1Q6ZSZ6 1077 aa12.79□□□□□ -0.36
SND1-201ENST00000354725 UPF1Q92900 1129 aaKnown RBP eCLIP12.79□□□□□ -0.362e-7■■■■□ 25.6
SND1-201ENST00000354725 MCM2P49736 904 aa12.78□□□□□ -0.36
SND1-201ENST00000354725 MCTP1Q6DN14 999 aa12.78□□□□□ -0.36
SND1-201ENST00000354725 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
SND1-201ENST00000354725 TOMM22Q9NS69 142 aa12.78□□□□□ -0.36
SND1-201ENST00000354725 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
SND1-201ENST00000354725 RHBDL3P58872 404 aa12.78□□□□□ -0.36
SND1-201ENST00000354725 IFNL2Q8IZJ0 200 aa12.78□□□□□ -0.36
SND1-201ENST00000354725 TMEM63CQ9P1W3 806 aa12.78□□□□□ -0.36
SND1-201ENST00000354725 UBR3Q6ZT12 1888 aa12.78□□□□□ -0.36
SND1-201ENST00000354725 SCP2P22307 547 aa12.78□□□□□ -0.36
SND1-201ENST00000354725 PAX3P23760 479 aa12.78□□□□□ -0.36
SND1-201ENST00000354725 TDO2P48775 406 aa12.78□□□□□ -0.36
SND1-201ENST00000354725 LRSAM1Q6UWE0 723 aa12.78□□□□□ -0.36
SND1-201ENST00000354725 KIF1CO43896 1103 aaKnown RBP12.77□□□□□ -0.36
SND1-201ENST00000354725 HMMRO75330 724 aa12.77□□□□□ -0.36
SND1-201ENST00000354725 TMX3Q96JJ7 454 aa12.77□□□□□ -0.36
SND1-201ENST00000354725 PPME1Q9Y570 386 aa12.77□□□□□ -0.36
SND1-201ENST00000354725 RPAP1Q9BWH6 1393 aaPredicted RBP12.77□□□□□ -0.37
SND1-201ENST00000354725 KCNQ2O43526 872 aa12.77□□□□□ -0.37
SND1-201ENST00000354725 PRIM1P49642 420 aaKnown RBP12.77□□□□□ -0.37
SND1-201ENST00000354725 TMEM87AQ8NBN3 555 aa12.77□□□□□ -0.37
SND1-201ENST00000354725 LGR6Q9HBX8 967 aa12.77□□□□□ -0.37
SND1-201ENST00000354725 HEG1Q9ULI3 1381 aa12.77□□□□□ -0.37
SND1-201ENST00000354725 ERVV-2B6SEH9 535 aa12.76□□□□□ -0.37
SND1-201ENST00000354725 ATP8B2P98198 1209 aa12.76□□□□□ -0.37
SND1-201ENST00000354725 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
SND1-201ENST00000354725 FBXW7Q969H0 707 aa12.76□□□□□ -0.37
SND1-201ENST00000354725 DCAF5Q96JK2 942 aa12.76□□□□□ -0.37
SND1-201ENST00000354725 NSFL1CQ9UNZ2 370 aaKnown RBP12.76□□□□□ -0.37
SND1-201ENST00000354725 RNMTO43148 476 aaKnown RBP12.76□□□□□ -0.37
SND1-201ENST00000354725 CHMLP26374 656 aa12.76□□□□□ -0.37
SND1-201ENST00000354725 IRF5Q13568 498 aa12.76□□□□□ -0.37
SND1-201ENST00000354725 GORABQ5T7V8 394 aa12.76□□□□□ -0.37
SND1-201ENST00000354725 C4BP0C0L5 1744 aa12.76□□□□□ -0.37
SND1-201ENST00000354725 USP42Q9H9J4 1324 aaKnown RBP12.76□□□□□ -0.37
SND1-201ENST00000354725 CCDC189A1A4V9 331 aa12.75□□□□□ -0.37
SND1-201ENST00000354725 GNAI2P04899 355 aa12.75□□□□□ -0.37
SND1-201ENST00000354725 GYS2P54840 703 aa12.75□□□□□ -0.37
SND1-201ENST00000354725 POLA2Q14181 598 aa12.75□□□□□ -0.37
SND1-201ENST00000354725 CAVIN1Q6NZI2 390 aaKnown RBP12.75□□□□□ -0.37
SND1-201ENST00000354725 VTI1AQ96AJ9 217 aa12.75□□□□□ -0.37
SND1-201ENST00000354725 PALD1Q9ULE6 856 aa12.75□□□□□ -0.37
SND1-201ENST00000354725 MYH14Q7Z406 1995 aaKnown RBP12.75□□□□□ -0.37
SND1-201ENST00000354725 NOLC1Q14978 699 aaKnown RBP eCLIP12.75□□□□□ -0.378e-19■■□□□ 14.4
SND1-201ENST00000354725 ZNF530Q6P9A1 599 aaPredicted RBP12.75□□□□□ -0.37
SND1-201ENST00000354725 ZNF662Q6ZS27 426 aa12.75□□□□□ -0.37
SND1-201ENST00000354725 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.75□□□□□ -0.372e-8■■□□□ 11.7
SND1-201ENST00000354725 CTIFO43310 598 aaKnown RBP12.75□□□□□ -0.37
SND1-201ENST00000354725 CASQ1P31415 396 aa12.75□□□□□ -0.37
SND1-201ENST00000354725 PIBF1Q8WXW3 757 aa12.75□□□□□ -0.37
SND1-201ENST00000354725 SUFUQ9UMX1 484 aa12.75□□□□□ -0.37
SND1-201ENST00000354725 C4AP0C0L4 1744 aa12.75□□□□□ -0.37
SND1-201ENST00000354725 RAD50Q92878 1312 aa12.75□□□□□ -0.37
SND1-201ENST00000354725 PNMA6EA0A0J9YXQ4 647 aa12.74□□□□□ -0.37
SND1-201ENST00000354725 PROM2Q8N271 834 aa12.74□□□□□ -0.37
SND1-201ENST00000354725 SRCIN1Q9C0H9 1055 aa12.74□□□□□ -0.37
SND1-201ENST00000354725 GNAT3A8MTJ3 354 aa12.74□□□□□ -0.37
SND1-201ENST00000354725 MX1P20591 662 aa12.74□□□□□ -0.37
SND1-201ENST00000354725 KRT222Q8N1A0 295 aa12.74□□□□□ -0.37
SND1-201ENST00000354725 DDX54Q8TDD1 881 aaKnown RBP12.74□□□□□ -0.37
SND1-201ENST00000354725 SSH3Q8TE77 659 aa12.74□□□□□ -0.37
SND1-201ENST00000354725 PIGBQ92521 554 aa12.74□□□□□ -0.37
SND1-201ENST00000354725 CAMKK2Q96RR4 588 aa12.74□□□□□ -0.37
SND1-201ENST00000354725 MED4Q9NPJ6 270 aa12.74□□□□□ -0.37
SND1-201ENST00000354725 CCDC125Q86Z20 511 aa12.74□□□□□ -0.37
SND1-201ENST00000354725 IL25Q9H293 177 aa12.74□□□□□ -0.37
SND1-201ENST00000354725 CXorf56Q9H5V9 222 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms