RNA–Protein interactions for RNA: ENST00000354532.7

ARHGEF1-203, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-203ENST00000354532 ZNF397Q8NF99 534 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF1-203ENST00000354532 FTOQ9C0B1 505 aaKnown RBP eCLIP15.36■□□□□ 0.05
ARHGEF1-203ENST00000354532 ZNF446Q9NWS9 450 aa15.36■□□□□ 0.05
ARHGEF1-203ENST00000354532 DCCP43146 1447 aa15.36■□□□□ 0.05
ARHGEF1-203ENST00000354532 BRF1Q92994 677 aa15.36■□□□□ 0.05
ARHGEF1-203ENST00000354532 GTF3C6Q969F1 213 aa15.36■□□□□ 0.05
ARHGEF1-203ENST00000354532 ST7Q9NRC1 585 aa15.36■□□□□ 0.05
ARHGEF1-203ENST00000354532 SNW1Q13573 536 aaKnown RBP15.35■□□□□ 0.05
ARHGEF1-203ENST00000354532 TSGA10IPQ3SY00 556 aa15.35■□□□□ 0.05
ARHGEF1-203ENST00000354532 TRMT1Q9NXH9 659 aaKnown RBP15.35■□□□□ 0.05
ARHGEF1-203ENST00000354532 TNS3Q68CZ2 1445 aa15.35■□□□□ 0.05
ARHGEF1-203ENST00000354532 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF1-203ENST00000354532 PTPN14Q15678 1187 aa15.35■□□□□ 0.05
ARHGEF1-203ENST00000354532 ELF2Q15723 593 aa15.35■□□□□ 0.05
ARHGEF1-203ENST00000354532 CWF19L2Q2TBE0 894 aaKnown RBP15.35■□□□□ 0.05
ARHGEF1-203ENST00000354532 TOM1L2Q6ZVM7 507 aa15.35■□□□□ 0.05
ARHGEF1-203ENST00000354532 GPATCH3Q96I76 525 aa15.35■□□□□ 0.05
ARHGEF1-203ENST00000354532 CCDC69A6NI79 296 aa15.34■□□□□ 0.05
ARHGEF1-203ENST00000354532 BOLA2Q9H3K6 86 aa15.34■□□□□ 0.05
ARHGEF1-203ENST00000354532 RGPD2P0DJD1 1756 aa15.34■□□□□ 0.05
ARHGEF1-203ENST00000354532 BTBD11A6QL63 1104 aa15.34■□□□□ 0.05
ARHGEF1-203ENST00000354532 ZBTB22O15209 634 aa15.34■□□□□ 0.05
ARHGEF1-203ENST00000354532 CEBPZQ03701 1054 aaKnown RBP15.34■□□□□ 0.05
ARHGEF1-203ENST00000354532 PROSER3Q2NL68 480 aa15.34■□□□□ 0.05
ARHGEF1-203ENST00000354532 CCAR2Q8N163 923 aaKnown RBP15.34■□□□□ 0.05
ARHGEF1-203ENST00000354532 KRT222Q8N1A0 295 aa15.34■□□□□ 0.05
ARHGEF1-203ENST00000354532 MAP3K2Q9Y2U5 619 aa15.34■□□□□ 0.05
ARHGEF1-203ENST00000354532 CAVIN2O95810 425 aa15.34■□□□□ 0.05
ARHGEF1-203ENST00000354532 PIP4K2BP78356 416 aa15.34■□□□□ 0.05
ARHGEF1-203ENST00000354532 EDC3Q96F86 508 aaKnown RBP15.34■□□□□ 0.05
ARHGEF1-203ENST00000354532 TAF5LO75529 589 aa15.33■□□□□ 0.04
ARHGEF1-203ENST00000354532 CHGBP05060 677 aa15.33■□□□□ 0.04
ARHGEF1-203ENST00000354532 NBPF11Q86T75 865 aa15.33■□□□□ 0.04
ARHGEF1-203ENST00000354532 AKAP4Q5JQC9 854 aa15.33■□□□□ 0.04
ARHGEF1-203ENST00000354532 USPL1Q5W0Q7 1092 aa15.33■□□□□ 0.04
ARHGEF1-203ENST00000354532 FILIP1Q7Z7B0 1213 aa15.33■□□□□ 0.04
ARHGEF1-203ENST00000354532 ERC1Q8IUD2 1116 aa15.33■□□□□ 0.04
ARHGEF1-203ENST00000354532 LRRN4CLQ8ND94 238 aa15.33■□□□□ 0.04
ARHGEF1-203ENST00000354532 KCND1Q9NSA2 647 aa15.33■□□□□ 0.04
ARHGEF1-203ENST00000354532 TMEM51Q9NW97 253 aa15.33■□□□□ 0.04
ARHGEF1-203ENST00000354532 GOLGA6L19H0YKK7 550 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 HIP1O00291 1037 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 HOXB7P09629 217 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 EVA1CP58658 441 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 RNF20Q5VTR2 975 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 TAF3Q5VWG9 929 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 ERCC4Q92889 916 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 NEMFO60524 1076 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 TATP17735 454 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 SLC39A6Q13433 755 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 AMOTQ4VCS5 1084 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 ENGASEQ8NFI3 743 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 ERO1AQ96HE7 468 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 SUCLG2Q96I99 432 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 FSD1Q9BTV5 496 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 C9orf78Q9NZ63 289 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 STX1AQ16623 288 aa15.32■□□□□ 0.04
ARHGEF1-203ENST00000354532 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF1-203ENST00000354532 SCRN1Q12765 414 aa15.31■□□□□ 0.04
ARHGEF1-203ENST00000354532 CCAR1Q8IX12 1150 aaKnown RBP15.31■□□□□ 0.04
ARHGEF1-203ENST00000354532 KLHDC4Q8TBB5 520 aa15.31■□□□□ 0.04
ARHGEF1-203ENST00000354532 BICC1Q9H694 974 aaKnown RBP15.31■□□□□ 0.04
ARHGEF1-203ENST00000354532 RCOR1Q9UKL0 485 aa15.31■□□□□ 0.04
ARHGEF1-203ENST00000354532 TRPM3Q9HCF6 1732 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF1-203ENST00000354532 SLFNL1Q499Z3 407 aa15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 Q6ZUG5 572 aa15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 KIF1AQ12756 1690 aa15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 PRAMEF22A3QJZ6 481 aa15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 RNMTO43148 476 aaKnown RBP15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 ALDH1L1O75891 902 aa15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 E4F1Q66K89 784 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 SMARCC2Q8TAQ2 1214 aa15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 ZSCAN16Q9H4T2 348 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 HMG20BQ9P0W2 317 aa15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 SOS2Q07890 1332 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 PXDNQ92626 1479 aa15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 LAMA4Q16363 1823 aa15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 SYTL4Q96C24 671 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 CFAP45Q9UL16 551 aa15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 RGPD5Q99666 1765 aa15.3■□□□□ 0.04
ARHGEF1-203ENST00000354532 SLU7O95391 586 aaKnown RBP15.29■□□□□ 0.04
ARHGEF1-203ENST00000354532 CTDNEP1O95476 244 aa15.29■□□□□ 0.04
ARHGEF1-203ENST00000354532 FGD1P98174 961 aa15.29■□□□□ 0.04
ARHGEF1-203ENST00000354532 NFATC2IPQ8NCF5 419 aa15.29■□□□□ 0.04
ARHGEF1-203ENST00000354532 NEK1Q96PY6 1258 aa15.29■□□□□ 0.04
ARHGEF1-203ENST00000354532 LRRC2Q9BYS8 371 aa15.29■□□□□ 0.04
ARHGEF1-203ENST00000354532 SLIT3O75094 1523 aa15.29■□□□□ 0.04
ARHGEF1-203ENST00000354532 XIRP1Q702N8 1843 aaKnown RBP15.29■□□□□ 0.04
ARHGEF1-203ENST00000354532 ILDR1Q86SU0 546 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF1-203ENST00000354532 USP28Q96RU2 1077 aa15.29■□□□□ 0.04
ARHGEF1-203ENST00000354532 SIL1Q9H173 461 aa15.29■□□□□ 0.04
ARHGEF1-203ENST00000354532 USP54Q70EL1 1684 aa15.28■□□□□ 0.04
ARHGEF1-203ENST00000354532 H3BQV1 296 aa15.28■□□□□ 0.04
ARHGEF1-203ENST00000354532 NPHP1O15259 732 aa15.28■□□□□ 0.04
ARHGEF1-203ENST00000354532 H2AFXP16104 143 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF1-203ENST00000354532 CCDC93Q567U6 631 aa15.28■□□□□ 0.04
ARHGEF1-203ENST00000354532 IFFO2Q5TF58 517 aa15.28■□□□□ 0.04
ARHGEF1-203ENST00000354532 KSR2Q6VAB6 950 aa15.28■□□□□ 0.04
ARHGEF1-203ENST00000354532 L2HGDHQ9H9P8 463 aa15.28■□□□□ 0.04
ARHGEF1-203ENST00000354532 DBF4Q9UBU7 674 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms