RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 NARFQ9UHQ1 456 aa22.27■■□□□ 1.16
TRIM41-202ENST00000351937 RTL9Q8NET4 1388 aa22.27■■□□□ 1.16
TRIM41-202ENST00000351937 ATP2B3Q16720 1220 aa22.27■■□□□ 1.16
TRIM41-202ENST00000351937 VGLL2Q8N8G2 317 aa22.27■■□□□ 1.16
TRIM41-202ENST00000351937 LY75O60449 1722 aa22.27■■□□□ 1.15
TRIM41-202ENST00000351937 MROH5Q6ZUA9 1318 aa22.26■■□□□ 1.15
TRIM41-202ENST00000351937 GOLIM4O00461 696 aa22.26■■□□□ 1.15
TRIM41-202ENST00000351937 GSE1Q14687 1217 aa22.26■■□□□ 1.15
TRIM41-202ENST00000351937 TTC39AQ5SRH9 613 aa22.26■■□□□ 1.15
TRIM41-202ENST00000351937 ABCC12Q96J65 1359 aa22.26■■□□□ 1.15
TRIM41-202ENST00000351937 LRP5O75197 1615 aa22.26■■□□□ 1.15
TRIM41-202ENST00000351937 GNPATO15228 680 aa22.25■■□□□ 1.15
TRIM41-202ENST00000351937 PDE8BO95263 885 aa22.25■■□□□ 1.15
TRIM41-202ENST00000351937 ADORA1P30542 326 aa22.25■■□□□ 1.15
TRIM41-202ENST00000351937 NECTIN1Q15223 517 aa22.25■■□□□ 1.15
TRIM41-202ENST00000351937 DDX60Q8IY21 1712 aaKnown RBP22.25■■□□□ 1.15
TRIM41-202ENST00000351937 SPEF2Q9C093 1822 aa22.25■■□□□ 1.15
TRIM41-202ENST00000351937 RASEFQ8IZ41 740 aa22.25■■□□□ 1.15
TRIM41-202ENST00000351937 RTCBQ9Y3I0 505 aaKnown RBP22.25■■□□□ 1.15
TRIM41-202ENST00000351937 SCN7AQ01118 1682 aa22.25■■□□□ 1.15
TRIM41-202ENST00000351937 LAMB2P55268 1798 aa22.25■■□□□ 1.15
TRIM41-202ENST00000351937 BCL2L12Q9HB09 334 aa22.24■■□□□ 1.15
TRIM41-202ENST00000351937 FOXD4L1Q9NU39 408 aa22.24■■□□□ 1.15
TRIM41-202ENST00000351937 RBM8AQ9Y5S9 174 aaKnown RBP22.24■■□□□ 1.15
TRIM41-202ENST00000351937 MCMDC2Q4G0Z9 681 aa22.23■■□□□ 1.15
TRIM41-202ENST00000351937 PRPF40BQ6NWY9 871 aaKnown RBP22.23■■□□□ 1.15
TRIM41-202ENST00000351937 UPF3BQ9BZI7 483 aaKnown RBP22.23■■□□□ 1.15
TRIM41-202ENST00000351937 ZPR1O75312 459 aa22.23■■□□□ 1.15
TRIM41-202ENST00000351937 ZKSCAN1P17029 563 aaPredicted RBP22.23■■□□□ 1.15
TRIM41-202ENST00000351937 USPL1Q5W0Q7 1092 aa22.23■■□□□ 1.15
TRIM41-202ENST00000351937 ZNF589Q86UQ0 364 aaPredicted RBP22.23■■□□□ 1.15
TRIM41-202ENST00000351937 ZNF512BQ96KM6 892 aaPredicted RBP22.23■■□□□ 1.15
TRIM41-202ENST00000351937 MPHOSPH8Q99549 860 aa22.23■■□□□ 1.15
TRIM41-202ENST00000351937 TAF5LO75529 589 aa22.22■■□□□ 1.15
TRIM41-202ENST00000351937 KCNJ4P48050 445 aa22.22■■□□□ 1.15
TRIM41-202ENST00000351937 TM6SF1Q9BZW5 370 aa22.22■■□□□ 1.15
TRIM41-202ENST00000351937 CWC22Q9HCG8 908 aaKnown RBP22.22■■□□□ 1.15
TRIM41-202ENST00000351937 PUM3Q15397 648 aaKnown RBP22.21■■□□□ 1.15
TRIM41-202ENST00000351937 LRRFIP1Q32MZ4 808 aaKnown RBP22.21■■□□□ 1.15
TRIM41-202ENST00000351937 TBC1D9BQ66K14 1250 aa22.21■■□□□ 1.15
TRIM41-202ENST00000351937 FAM196AQ6ZSG2 479 aa22.21■■□□□ 1.15
TRIM41-202ENST00000351937 SEC31BQ9NQW1 1179 aa22.21■■□□□ 1.15
TRIM41-202ENST00000351937 HELLSQ9NRZ9 838 aa22.21■■□□□ 1.15
TRIM41-202ENST00000351937 TAF1LQ8IZX4 1826 aa22.21■■□□□ 1.15
TRIM41-202ENST00000351937 ERFEQ4G0M1 354 aa22.21■■□□□ 1.15
TRIM41-202ENST00000351937 RNF20Q5VTR2 975 aa22.21■■□□□ 1.15
TRIM41-202ENST00000351937 CREB3L3Q68CJ9 461 aa22.21■■□□□ 1.15
TRIM41-202ENST00000351937 TMX3Q96JJ7 454 aa22.21■■□□□ 1.15
TRIM41-202ENST00000351937 IGHMBP2P38935 993 aaKnown RBP22.2■■□□□ 1.14
TRIM41-202ENST00000351937 FKBP4Q02790 459 aaKnown RBP eCLIP22.2■■□□□ 1.14
TRIM41-202ENST00000351937 SMIM5Q71RC9 77 aa22.2■■□□□ 1.14
TRIM41-202ENST00000351937 LPIN2Q92539 896 aa22.2■■□□□ 1.14
TRIM41-202ENST00000351937 NYXQ9GZU5 481 aa22.2■■□□□ 1.14
TRIM41-202ENST00000351937 SLC10A5Q5PT55 438 aa22.2■■□□□ 1.14
TRIM41-202ENST00000351937 ARHGEF1Q92888 912 aaKnown RBP22.2■■□□□ 1.14
TRIM41-202ENST00000351937 FGFR2P21802 821 aa22.19■■□□□ 1.14
TRIM41-202ENST00000351937 SSFA2P28290 1259 aa22.19■■□□□ 1.14
TRIM41-202ENST00000351937 SF3B3Q15393 1217 aaKnown RBP22.19■■□□□ 1.14
TRIM41-202ENST00000351937 KRT27Q7Z3Y8 459 aa22.19■■□□□ 1.14
TRIM41-202ENST00000351937 SETDB2Q96T68 719 aa22.19■■□□□ 1.14
TRIM41-202ENST00000351937 SRP68Q9UHB9 627 aaKnown RBP22.19■■□□□ 1.14
TRIM41-202ENST00000351937 RAB3GAP1Q15042 981 aa22.19■■□□□ 1.14
TRIM41-202ENST00000351937 C4BP0C0L5 1744 aa22.18■■□□□ 1.14
TRIM41-202ENST00000351937 RNF113AO15541 343 aaKnown RBP22.18■■□□□ 1.14
TRIM41-202ENST00000351937 ZMYM1Q5SVZ6 1142 aa22.18■■□□□ 1.14
TRIM41-202ENST00000351937 BICDL1Q6ZP65 573 aa22.18■■□□□ 1.14
TRIM41-202ENST00000351937 TTC14Q96N46 770 aa22.18■■□□□ 1.14
TRIM41-202ENST00000351937 HMG20BQ9P0W2 317 aa22.18■■□□□ 1.14
TRIM41-202ENST00000351937 SLC27A2O14975 620 aa22.18■■□□□ 1.14
TRIM41-202ENST00000351937 CUL4AQ13619 759 aa22.18■■□□□ 1.14
TRIM41-202ENST00000351937 CDC5LQ99459 802 aaKnown RBP22.18■■□□□ 1.14
TRIM41-202ENST00000351937 CASTP20810 708 aaKnown RBP22.17■■□□□ 1.14
TRIM41-202ENST00000351937 GTF2E1P29083 439 aaPredicted RBP22.17■■□□□ 1.14
TRIM41-202ENST00000351937 SEC62Q99442 399 aaKnown RBP22.17■■□□□ 1.14
TRIM41-202ENST00000351937 ZSWIM6Q9HCJ5 1215 aa22.17■■□□□ 1.14
TRIM41-202ENST00000351937 CHGBP05060 677 aa22.17■■□□□ 1.14
TRIM41-202ENST00000351937 ZFYP08048 801 aaPredicted RBP22.17■■□□□ 1.14
TRIM41-202ENST00000351937 SCARF1Q14162 830 aa22.17■■□□□ 1.14
TRIM41-202ENST00000351937 TRAPPC3LQ5T215 181 aa22.17■■□□□ 1.14
TRIM41-202ENST00000351937 TSGA10IPQ3SY00 556 aa22.16■■□□□ 1.14
TRIM41-202ENST00000351937 JAKMIP1Q96N16 626 aaKnown RBP22.16■■□□□ 1.14
TRIM41-202ENST00000351937 AMIGO3Q86WK7 504 aa22.16■■□□□ 1.14
TRIM41-202ENST00000351937 INTS4Q96HW7 963 aaKnown RBP22.16■■□□□ 1.14
TRIM41-202ENST00000351937 U3KPZ7 1027 aaPredicted RBP22.16■■□□□ 1.14
TRIM41-202ENST00000351937 UQCRFS1P1P0C7P4 283 aa22.15■■□□□ 1.14
TRIM41-202ENST00000351937 SLC5A1P13866 664 aa22.15■■□□□ 1.14
TRIM41-202ENST00000351937 PSMA5P28066 241 aa22.15■■□□□ 1.14
TRIM41-202ENST00000351937 RFC4P35249 363 aa22.15■■□□□ 1.14
TRIM41-202ENST00000351937 ZAP70P43403 619 aa22.15■■□□□ 1.14
TRIM41-202ENST00000351937 ADCK5Q3MIX3 580 aa22.15■■□□□ 1.14
TRIM41-202ENST00000351937 HELBQ8NG08 1087 aaPredicted RBP22.15■■□□□ 1.14
TRIM41-202ENST00000351937 LRRC4BQ9NT99 713 aa22.15■■□□□ 1.14
TRIM41-202ENST00000351937 CYP46A1Q9Y6A2 500 aa22.15■■□□□ 1.14
TRIM41-202ENST00000351937 VPS53Q5VIR6 699 aa22.15■■□□□ 1.14
TRIM41-202ENST00000351937 CCDC102BQ68D86 513 aa22.15■■□□□ 1.14
TRIM41-202ENST00000351937 CCDC129Q6ZRS4 1044 aa22.15■■□□□ 1.14
TRIM41-202ENST00000351937 ADRA2BP18089 450 aa22.14■■□□□ 1.14
TRIM41-202ENST00000351937 ARID4AP29374 1257 aaPredicted RBP22.14■■□□□ 1.14
TRIM41-202ENST00000351937 MCAMP43121 646 aa22.14■■□□□ 1.14
TRIM41-202ENST00000351937 SLC27A3Q5K4L6 730 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 246.9 ms