RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SCP2P22307 547 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 KCNV1Q6PIU1 500 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 TCEANC2Q96MN5 208 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 GOLPH3LQ9H4A5 285 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 GOLGA8FQ08AF8 430 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 GOLGA8DPQ0D2H9 430 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.34■□□□□ 0.05
IFT88-202ENST00000351808 CEP120Q8N960 986 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 RNF217Q8TC41 542 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 STK26Q9P289 416 aa15.34■□□□□ 0.05
IFT88-202ENST00000351808 GOLIM4O00461 696 aa15.33■□□□□ 0.04
IFT88-202ENST00000351808 EIF3JO75822 258 aaKnown RBP15.33■□□□□ 0.04
IFT88-202ENST00000351808 EIF5P55010 431 aaKnown RBP15.33■□□□□ 0.04
IFT88-202ENST00000351808 PSME1Q06323 249 aa15.33■□□□□ 0.04
IFT88-202ENST00000351808 NAT10Q9H0A0 1025 aaKnown RBP15.33■□□□□ 0.04
IFT88-202ENST00000351808 HSP90AB3PQ58FF7 597 aa15.33■□□□□ 0.04
IFT88-202ENST00000351808 LRCH2Q5VUJ6 765 aa15.33■□□□□ 0.04
IFT88-202ENST00000351808 SGSM3Q96HU1 749 aa15.33■□□□□ 0.04
IFT88-202ENST00000351808 C14orf93Q9H972 538 aaKnown RBP15.33■□□□□ 0.04
IFT88-202ENST00000351808 ZC3H13Q5T200 1668 aaKnown RBP15.32■□□□□ 0.04
IFT88-202ENST00000351808 CDK12Q9NYV4 1490 aaPredicted RBP15.32■□□□□ 0.04
IFT88-202ENST00000351808 KINO60870 393 aaKnown RBP15.32■□□□□ 0.04
IFT88-202ENST00000351808 STK3Q13188 491 aa15.32■□□□□ 0.04
IFT88-202ENST00000351808 DHX58Q96C10 678 aa15.32■□□□□ 0.04
IFT88-202ENST00000351808 HSP90B2PQ58FF3 399 aa15.32■□□□□ 0.04
IFT88-202ENST00000351808 G2E3Q7L622 706 aa15.32■□□□□ 0.04
IFT88-202ENST00000351808 FAM204AQ9H8W3 233 aa15.32■□□□□ 0.04
IFT88-202ENST00000351808 ABCB6Q9NP58 842 aa15.32■□□□□ 0.04
IFT88-202ENST00000351808 VWDEQ8N2E2 1590 aa15.32■□□□□ 0.04
IFT88-202ENST00000351808 EXOC5O00471 708 aa15.31■□□□□ 0.04
IFT88-202ENST00000351808 RAB11FIP3O75154 756 aa15.31■□□□□ 0.04
IFT88-202ENST00000351808 TMED8Q6PL24 325 aaPredicted RBP15.31■□□□□ 0.04
IFT88-202ENST00000351808 FTOQ9C0B1 505 aaKnown RBP eCLIP15.31■□□□□ 0.04
IFT88-202ENST00000351808 L1RE1Q9UN81 338 aa15.31■□□□□ 0.04
IFT88-202ENST00000351808 NRXN1Q9ULB1 1477 aa15.31■□□□□ 0.04
IFT88-202ENST00000351808 CCDC73Q6ZRK6 1079 aa15.31■□□□□ 0.04
IFT88-202ENST00000351808 CLIC6Q96NY7 704 aa15.31■□□□□ 0.04
IFT88-202ENST00000351808 RAI14Q9P0K7 980 aa15.31■□□□□ 0.04
IFT88-202ENST00000351808 RIMS2Q9UQ26 1411 aa15.31■□□□□ 0.04
IFT88-202ENST00000351808 PTPN21Q16825 1174 aa15.3■□□□□ 0.04
IFT88-202ENST00000351808 PUS7Q96PZ0 661 aaKnown RBP15.3■□□□□ 0.04
IFT88-202ENST00000351808 PNKPQ96T60 521 aa15.3■□□□□ 0.04
IFT88-202ENST00000351808 JPH2Q9BR39 696 aaPredicted RBP15.3■□□□□ 0.04
IFT88-202ENST00000351808 TM6SF1Q9BZW5 370 aa15.3■□□□□ 0.04
IFT88-202ENST00000351808 ANKZF1Q9H8Y5 726 aa15.3■□□□□ 0.04
IFT88-202ENST00000351808 ZSCAN12O43309 604 aa15.3■□□□□ 0.04
IFT88-202ENST00000351808 ATP8B2P98198 1209 aa15.3■□□□□ 0.04
IFT88-202ENST00000351808 RESTQ13127 1097 aa15.3■□□□□ 0.04
IFT88-202ENST00000351808 DPCR1Q3MIW9 517 aa15.3■□□□□ 0.04
IFT88-202ENST00000351808 PI4K2BQ8TCG2 481 aa15.3■□□□□ 0.04
IFT88-202ENST00000351808 HNRNPLLQ8WVV9 542 aaKnown RBP15.3■□□□□ 0.04
IFT88-202ENST00000351808 TERF2IPQ9NYB0 399 aa15.3■□□□□ 0.04
IFT88-202ENST00000351808 PPP2R2CQ9Y2T4 447 aa15.3■□□□□ 0.04
IFT88-202ENST00000351808 FAM71BQ8TC56 605 aa15.3■□□□□ 0.04
IFT88-202ENST00000351808 PUF60Q9UHX1 559 aaKnown RBP15.3■□□□□ 0.04
IFT88-202ENST00000351808 TULP4Q9NRJ4 1543 aa15.29■□□□□ 0.04
IFT88-202ENST00000351808 PPP1R12AO14974 1030 aaPredicted RBP15.29■□□□□ 0.04
IFT88-202ENST00000351808 ERC1Q8IUD2 1116 aa15.29■□□□□ 0.04
IFT88-202ENST00000351808 CNTROBQ8N137 903 aa15.29■□□□□ 0.04
IFT88-202ENST00000351808 CFAP45Q9UL16 551 aa15.29■□□□□ 0.04
IFT88-202ENST00000351808 AOX1Q06278 1338 aa15.29■□□□□ 0.04
IFT88-202ENST00000351808 GIGYF1O75420 1035 aaPredicted RBP15.29■□□□□ 0.04
IFT88-202ENST00000351808 LMOD1P29536 600 aaPredicted RBP15.29■□□□□ 0.04
IFT88-202ENST00000351808 USP8P40818 1118 aa15.29■□□□□ 0.04
IFT88-202ENST00000351808 CHMP4BP1P59074 171 aa15.29■□□□□ 0.04
IFT88-202ENST00000351808 JAK2O60674 1132 aa15.28■□□□□ 0.04
IFT88-202ENST00000351808 CCT4P50991 539 aaKnown RBP15.28■□□□□ 0.04
IFT88-202ENST00000351808 CASP8Q14790 479 aa15.28■□□□□ 0.04
IFT88-202ENST00000351808 GBP6Q6ZN66 633 aa15.28■□□□□ 0.04
IFT88-202ENST00000351808 BRF1Q92994 677 aa15.28■□□□□ 0.04
IFT88-202ENST00000351808 DHX8Q14562 1220 aaKnown RBP15.28■□□□□ 0.04
IFT88-202ENST00000351808 CPLX2Q6PUV4 134 aaKnown RBP15.28■□□□□ 0.04
IFT88-202ENST00000351808 GIMAP7Q8NHV1 300 aa15.28■□□□□ 0.04
IFT88-202ENST00000351808 KIFC2Q96AC6 838 aa15.28■□□□□ 0.04
IFT88-202ENST00000351808 SDF4Q9BRK5 362 aa15.28■□□□□ 0.04
IFT88-202ENST00000351808 ADGRL3Q9HAR2 1447 aa15.28■□□□□ 0.04
IFT88-202ENST00000351808 IRF6O14896 467 aa15.27■□□□□ 0.04
IFT88-202ENST00000351808 ERLIN1O75477 346 aa15.27■□□□□ 0.04
IFT88-202ENST00000351808 FANCCQ00597 558 aa15.27■□□□□ 0.04
IFT88-202ENST00000351808 ENGASEQ8NFI3 743 aa15.27■□□□□ 0.04
IFT88-202ENST00000351808 FAM107BQ9H098 131 aa15.27■□□□□ 0.04
IFT88-202ENST00000351808 H3BQV1 296 aa15.27■□□□□ 0.03
IFT88-202ENST00000351808 BIN1O00499 593 aa15.27■□□□□ 0.03
IFT88-202ENST00000351808 ATP1A3P13637 1013 aa15.27■□□□□ 0.03
IFT88-202ENST00000351808 ZKSCAN1P17029 563 aaPredicted RBP15.27■□□□□ 0.03
IFT88-202ENST00000351808 TRDNQ13061 729 aa15.27■□□□□ 0.03
IFT88-202ENST00000351808 MAP9Q49MG5 647 aa15.27■□□□□ 0.03
IFT88-202ENST00000351808 IFFO2Q5TF58 517 aa15.27■□□□□ 0.03
IFT88-202ENST00000351808 FSIP1Q8NA03 581 aa15.27■□□□□ 0.03
IFT88-202ENST00000351808 CCDC12Q8WUD4 166 aaPredicted RBP15.27■□□□□ 0.03
IFT88-202ENST00000351808 WDHD1O75717 1129 aaPredicted RBP15.26■□□□□ 0.03
IFT88-202ENST00000351808 USP5P45974 858 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 CCT5P48643 541 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 FAM160A1Q05DH4 1040 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 GRIPAP1Q4V328 841 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 FAM169AQ9Y6X4 670 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 SETBP1Q9Y6X0 1596 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 FOSBP53539 338 aa15.26■□□□□ 0.03
IFT88-202ENST00000351808 MAP2K1Q02750 393 aaPredicted RBP15.26■□□□□ 0.03
IFT88-202ENST00000351808 DPF2Q92785 391 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms