RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 PTMAP06454 111 aaKnown RBP25.42■■□□□ 1.66
PTPN18-202ENST00000347849 CSF1RP07333 972 aa25.42■■□□□ 1.66
PTPN18-202ENST00000347849 IL6STP40189 918 aaPredicted RBP25.42■■□□□ 1.66
PTPN18-202ENST00000347849 NECTIN1Q15223 517 aa25.42■■□□□ 1.66
PTPN18-202ENST00000347849 BARGINQ6ZT62 677 aa25.42■■□□□ 1.66
PTPN18-202ENST00000347849 HAUS7Q99871 368 aa25.42■■□□□ 1.66
PTPN18-202ENST00000347849 SEC62Q99442 399 aaKnown RBP25.42■■□□□ 1.66
PTPN18-202ENST00000347849 RBM8AQ9Y5S9 174 aaKnown RBP25.42■■□□□ 1.66
PTPN18-202ENST00000347849 TAF6LQ9Y6J9 622 aa25.42■■□□□ 1.66
PTPN18-202ENST00000347849 LOC102724428A0A0B4J2F2 783 aa25.41■■□□□ 1.66
PTPN18-202ENST00000347849 A0A1B0GUL7 405 aa25.41■■□□□ 1.66
PTPN18-202ENST00000347849 GADD45BO75293 160 aaPredicted RBP25.41■■□□□ 1.66
PTPN18-202ENST00000347849 SIK1P57059 783 aa25.41■■□□□ 1.66
PTPN18-202ENST00000347849 TTC14Q96N46 770 aa25.41■■□□□ 1.66
PTPN18-202ENST00000347849 MAP4K1Q92918 833 aa25.41■■□□□ 1.66
PTPN18-202ENST00000347849 PLA2G12BQ9BX93 195 aa25.41■■□□□ 1.66
PTPN18-202ENST00000347849 SNRKQ9NRH2 765 aa25.41■■□□□ 1.66
PTPN18-202ENST00000347849 HIP1O00291 1037 aa25.4■■□□□ 1.66
PTPN18-202ENST00000347849 CRKLP46109 303 aaKnown RBP25.4■■□□□ 1.66
PTPN18-202ENST00000347849 EIF5P55010 431 aaKnown RBP25.4■■□□□ 1.66
PTPN18-202ENST00000347849 SYAP1Q96A49 352 aaPredicted RBP25.4■■□□□ 1.66
PTPN18-202ENST00000347849 GREM2Q9H772 168 aa25.4■■□□□ 1.66
PTPN18-202ENST00000347849 MED23Q9ULK4 1368 aa25.4■■□□□ 1.66
PTPN18-202ENST00000347849 CIAO1O76071 339 aa25.4■■□□□ 1.66
PTPN18-202ENST00000347849 TTLL11Q8NHH1 800 aa25.4■■□□□ 1.66
PTPN18-202ENST00000347849 CASTP20810 708 aaKnown RBP25.39■■□□□ 1.66
PTPN18-202ENST00000347849 PTF1AQ7RTS3 328 aa25.39■■□□□ 1.66
PTPN18-202ENST00000347849 NGLY1Q96IV0 654 aa25.39■■□□□ 1.66
PTPN18-202ENST00000347849 TRMT112Q9UI30 125 aaKnown RBP25.39■■□□□ 1.66
PTPN18-202ENST00000347849 ZNF609O15014 1411 aa25.39■■□□□ 1.65
PTPN18-202ENST00000347849 AK2P54819 239 aa25.39■■□□□ 1.65
PTPN18-202ENST00000347849 CCDC129Q6ZRS4 1044 aa25.39■■□□□ 1.65
PTPN18-202ENST00000347849 GPR108Q9NPR9 543 aa25.39■■□□□ 1.65
PTPN18-202ENST00000347849 ADORA1P30542 326 aa25.38■■□□□ 1.65
PTPN18-202ENST00000347849 KCNQ4P56696 695 aa25.38■■□□□ 1.65
PTPN18-202ENST00000347849 CREB3L3Q68CJ9 461 aa25.38■■□□□ 1.65
PTPN18-202ENST00000347849 USP48Q86UV5 1035 aa25.38■■□□□ 1.65
PTPN18-202ENST00000347849 GOLIM4O00461 696 aa25.38■■□□□ 1.65
PTPN18-202ENST00000347849 IRS4O14654 1257 aaPredicted RBP25.38■■□□□ 1.65
PTPN18-202ENST00000347849 KCNB2Q92953 911 aa25.38■■□□□ 1.65
PTPN18-202ENST00000347849 JAKMIP1Q96N16 626 aaKnown RBP25.38■■□□□ 1.65
PTPN18-202ENST00000347849 CCDC87Q9NVE4 849 aa25.38■■□□□ 1.65
PTPN18-202ENST00000347849 BCL9LQ86UU0 1499 aa25.37■■□□□ 1.65
PTPN18-202ENST00000347849 DTNBO60941 627 aa25.37■■□□□ 1.65
PTPN18-202ENST00000347849 IFIT5Q13325 482 aaKnown RBP25.37■■□□□ 1.65
PTPN18-202ENST00000347849 CEP126Q9P2H0 1117 aa25.37■■□□□ 1.65
PTPN18-202ENST00000347849 FAM177BA6PVY3 158 aa25.37■■□□□ 1.65
PTPN18-202ENST00000347849 TPRNQ4KMQ1 711 aa25.37■■□□□ 1.65
PTPN18-202ENST00000347849 HSP90AB3PQ58FF7 597 aa25.37■■□□□ 1.65
PTPN18-202ENST00000347849 RUFY3Q7L099 469 aa25.37■■□□□ 1.65
PTPN18-202ENST00000347849 MPNDQ8N594 471 aa25.37■■□□□ 1.65
PTPN18-202ENST00000347849 CDHR2Q9BYE9 1310 aa25.37■■□□□ 1.65
PTPN18-202ENST00000347849 ERVV-1B6SEH8 477 aa25.36■■□□□ 1.65
PTPN18-202ENST00000347849 ITGA6P23229 1130 aa25.36■■□□□ 1.65
PTPN18-202ENST00000347849 ZNF34Q8IZ26 560 aa25.36■■□□□ 1.65
PTPN18-202ENST00000347849 PALLDQ8WX93 1383 aa25.36■■□□□ 1.65
PTPN18-202ENST00000347849 KCNJ4P48050 445 aa25.36■■□□□ 1.65
PTPN18-202ENST00000347849 NWD2Q9ULI1 1742 aa25.35■■□□□ 1.65
PTPN18-202ENST00000347849 SLC27A2O14975 620 aa25.35■■□□□ 1.65
PTPN18-202ENST00000347849 TAF5LO75529 589 aa25.35■■□□□ 1.65
PTPN18-202ENST00000347849 CTSWP56202 376 aa25.35■■□□□ 1.65
PTPN18-202ENST00000347849 TAF7LQ5H9L4 462 aa25.35■■□□□ 1.65
PTPN18-202ENST00000347849 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.35■■□□□ 1.659e-9■□□□□ 8
PTPN18-202ENST00000347849 MAP7D2Q96T17 732 aa25.35■■□□□ 1.65
PTPN18-202ENST00000347849 NUP98P52948 1817 aa25.34■■□□□ 1.65
PTPN18-202ENST00000347849 KBTBD3Q8NAB2 608 aa25.34■■□□□ 1.65
PTPN18-202ENST00000347849 WDR33Q9C0J8 1336 aaKnown RBP25.34■■□□□ 1.65
PTPN18-202ENST00000347849 LARGE1O95461 756 aa25.34■■□□□ 1.65
PTPN18-202ENST00000347849 SUSD4Q5VX71 490 aa25.34■■□□□ 1.65
PTPN18-202ENST00000347849 SASS6Q6UVJ0 657 aa25.34■■□□□ 1.65
PTPN18-202ENST00000347849 PAG1Q9NWQ8 432 aa25.34■■□□□ 1.65
PTPN18-202ENST00000347849 PHF14O94880 888 aa25.33■■□□□ 1.65
PTPN18-202ENST00000347849 DYNC1I1O14576 645 aa25.32■■□□□ 1.64
PTPN18-202ENST00000347849 SMIM5Q71RC9 77 aa25.32■■□□□ 1.64
PTPN18-202ENST00000347849 XAGE2Q96GT9 111 aa25.32■■□□□ 1.64
PTPN18-202ENST00000347849 ZSWIM6Q9HCJ5 1215 aa25.32■■□□□ 1.64
PTPN18-202ENST00000347849 RIPOR2Q9Y4F9 1068 aa25.32■■□□□ 1.64
PTPN18-202ENST00000347849 IFIT1P09914 478 aaKnown RBP25.32■■□□□ 1.64
PTPN18-202ENST00000347849 MYH14Q7Z406 1995 aaKnown RBP25.31■■□□□ 1.64
PTPN18-202ENST00000347849 HCLS1P14317 486 aaPredicted RBP25.31■■□□□ 1.64
PTPN18-202ENST00000347849 KIAA2012Q0VF49 1180 aa25.31■■□□□ 1.64
PTPN18-202ENST00000347849 SCARF1Q14162 830 aa25.31■■□□□ 1.64
PTPN18-202ENST00000347849 FAM182BQ5T319 152 aa25.31■■□□□ 1.64
PTPN18-202ENST00000347849 LDHAL6AQ6ZMR3 332 aa25.31■■□□□ 1.64
PTPN18-202ENST00000347849 CAMTA2O94983 1202 aa25.31■■□□□ 1.64
PTPN18-202ENST00000347849 RIC1Q4ADV7 1423 aa25.31■■□□□ 1.64
PTPN18-202ENST00000347849 TCEANC2Q96MN5 208 aa25.31■■□□□ 1.64
PTPN18-202ENST00000347849 ZNF830Q96NB3 372 aaPredicted RBP25.31■■□□□ 1.64
PTPN18-202ENST00000347849 ARID3AQ99856 593 aa25.31■■□□□ 1.64
PTPN18-202ENST00000347849 VPS72Q15906 364 aa25.3■■□□□ 1.64
PTPN18-202ENST00000347849 JCADQ9P266 1359 aa25.3■■□□□ 1.64
PTPN18-202ENST00000347849 ANKRD36CQ5JPF3 1778 aa25.3■■□□□ 1.64
PTPN18-202ENST00000347849 DNTTIP2Q5QJE6 756 aaKnown RBP25.3■■□□□ 1.64
PTPN18-202ENST00000347849 PDRG1Q9NUG6 133 aa25.3■■□□□ 1.64
PTPN18-202ENST00000347849 ZKSCAN1P17029 563 aaPredicted RBP25.29■■□□□ 1.64
PTPN18-202ENST00000347849 PI16Q6UXB8 463 aa25.29■■□□□ 1.64
PTPN18-202ENST00000347849 PDE8AO60658 829 aa25.29■■□□□ 1.64
PTPN18-202ENST00000347849 FKBP4Q02790 459 aaKnown RBP eCLIP25.28■■□□□ 1.64
PTPN18-202ENST00000347849 MCMDC2Q4G0Z9 681 aa25.28■■□□□ 1.64
PTPN18-202ENST00000347849 METTL24Q5JXM2 366 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms