RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 FSIP1Q8NA03 581 aa17.81■□□□□ 0.44
SRPK1-201ENST00000346162 SLC12A7Q9Y666 1083 aa17.81■□□□□ 0.44
SRPK1-201ENST00000346162 CCDC148Q8NFR7 591 aa17.8■□□□□ 0.44
SRPK1-201ENST00000346162 CEP131Q9UPN4 1083 aa17.8■□□□□ 0.44
SRPK1-201ENST00000346162 PIP4K2BP78356 416 aa17.8■□□□□ 0.44
SRPK1-201ENST00000346162 ORC3Q9UBD5 711 aaPredicted RBP17.8■□□□□ 0.44
SRPK1-201ENST00000346162 EZRP15311 586 aaKnown RBP17.8■□□□□ 0.44
SRPK1-201ENST00000346162 SYT10Q6XYQ8 523 aa17.8■□□□□ 0.44
SRPK1-201ENST00000346162 CCAR1Q8IX12 1150 aaKnown RBP17.8■□□□□ 0.44
SRPK1-201ENST00000346162 CABLES1Q8TDN4 633 aa17.79■□□□□ 0.44
SRPK1-201ENST00000346162 LMBRD1Q9NUN5 540 aa17.79■□□□□ 0.44
SRPK1-201ENST00000346162 ERVK-7P63135 1459 aa17.79■□□□□ 0.44
SRPK1-201ENST00000346162 ZNF521Q96K83 1311 aa17.79■□□□□ 0.44
SRPK1-201ENST00000346162 CCDC150Q8NCX0 1101 aa17.79■□□□□ 0.44
SRPK1-201ENST00000346162 CCDC12Q8WUD4 166 aaPredicted RBP17.79■□□□□ 0.44
SRPK1-201ENST00000346162 LRRC2Q9BYS8 371 aa17.79■□□□□ 0.44
SRPK1-201ENST00000346162 RNMTO43148 476 aaKnown RBP17.79■□□□□ 0.44
SRPK1-201ENST00000346162 TTF1Q15361 905 aaPredicted RBP17.79■□□□□ 0.44
SRPK1-201ENST00000346162 NEK11Q8NG66 645 aa17.79■□□□□ 0.44
SRPK1-201ENST00000346162 NMIQ13287 307 aaPredicted RBP17.79■□□□□ 0.44
SRPK1-201ENST00000346162 C19orf44Q9H6X5 657 aa17.79■□□□□ 0.44
SRPK1-201ENST00000346162 BABAM1Q9NWV8 329 aa17.79■□□□□ 0.44
SRPK1-201ENST00000346162 MYO5CQ9NQX4 1742 aa17.78■□□□□ 0.44
SRPK1-201ENST00000346162 GOLGA8AA7E2F4 631 aa17.78■□□□□ 0.44
SRPK1-201ENST00000346162 ATP6V1AP38606 617 aa17.78■□□□□ 0.44
SRPK1-201ENST00000346162 IL15P40933 162 aaPredicted RBP17.78■□□□□ 0.44
SRPK1-201ENST00000346162 MCMDC2Q4G0Z9 681 aa17.78■□□□□ 0.44
SRPK1-201ENST00000346162 NBPF11Q86T75 865 aa17.78■□□□□ 0.44
SRPK1-201ENST00000346162 LUZP1Q86V48 1076 aa17.78■□□□□ 0.44
SRPK1-201ENST00000346162 RNF41Q9H4P4 317 aaPredicted RBP17.78■□□□□ 0.44
SRPK1-201ENST00000346162 DDX21Q9NR30 783 aaKnown RBP eCLIP17.78■□□□□ 0.44
SRPK1-201ENST00000346162 TMEM63CQ9P1W3 806 aa17.78■□□□□ 0.44
SRPK1-201ENST00000346162 PLEKHG3A1L390 1219 aa17.78■□□□□ 0.44
SRPK1-201ENST00000346162 ANTXR1Q9H6X2 564 aa17.78■□□□□ 0.44
SRPK1-201ENST00000346162 STX1AQ16623 288 aa17.78■□□□□ 0.44
SRPK1-201ENST00000346162 IQCA1Q86XH1 822 aa17.78■□□□□ 0.44
SRPK1-201ENST00000346162 PLA2R1Q13018 1463 aa17.77■□□□□ 0.44
SRPK1-201ENST00000346162 RANBP6O60518 1105 aaKnown RBP17.77■□□□□ 0.44
SRPK1-201ENST00000346162 KRT18P05783 430 aaKnown RBP17.77■□□□□ 0.44
SRPK1-201ENST00000346162 LIG1P18858 919 aa17.77■□□□□ 0.44
SRPK1-201ENST00000346162 NCOA7Q8NI08 942 aa17.77■□□□□ 0.44
SRPK1-201ENST00000346162 AK2P54819 239 aa17.77■□□□□ 0.44
SRPK1-201ENST00000346162 OTUD6BQ8N6M0 293 aa17.77■□□□□ 0.44
SRPK1-201ENST00000346162 ZSCAN16Q9H4T2 348 aaPredicted RBP17.77■□□□□ 0.44
SRPK1-201ENST00000346162 EFCC1Q9HA90 598 aa17.77■□□□□ 0.44
SRPK1-201ENST00000346162 ZBTB22O15209 634 aa17.77■□□□□ 0.43
SRPK1-201ENST00000346162 INTS4Q96HW7 963 aaKnown RBP17.77■□□□□ 0.43
SRPK1-201ENST00000346162 KDM5AP29375 1690 aaKnown RBP17.77■□□□□ 0.43
SRPK1-201ENST00000346162 NEO1Q92859 1461 aa17.76■□□□□ 0.43
SRPK1-201ENST00000346162 IARSP41252 1262 aaKnown RBP17.76■□□□□ 0.43
SRPK1-201ENST00000346162 MICU3Q86XE3 530 aa17.76■□□□□ 0.43
SRPK1-201ENST00000346162 RAB11FIP4Q86YS3 637 aa17.76■□□□□ 0.43
SRPK1-201ENST00000346162 CTCFLQ8NI51 663 aaPredicted RBP17.76■□□□□ 0.43
SRPK1-201ENST00000346162 POLR3DP05423 398 aaPredicted RBP17.76■□□□□ 0.43
SRPK1-201ENST00000346162 ZFYP08048 801 aaPredicted RBP17.76■□□□□ 0.43
SRPK1-201ENST00000346162 TYRO3Q06418 890 aa17.76■□□□□ 0.43
SRPK1-201ENST00000346162 KIAA1328Q86T90 577 aa17.76■□□□□ 0.43
SRPK1-201ENST00000346162 DNAJC25Q9H1X3 360 aa17.76■□□□□ 0.43
SRPK1-201ENST00000346162 A0A1B0GUA9 196 aa17.76■□□□□ 0.43
SRPK1-201ENST00000346162 ZPR1O75312 459 aa17.76■□□□□ 0.43
SRPK1-201ENST00000346162 F13A1P00488 732 aa17.76■□□□□ 0.43
SRPK1-201ENST00000346162 PLXNC1O60486 1568 aa17.76■□□□□ 0.43
SRPK1-201ENST00000346162 NAA25Q14CX7 972 aa17.75■□□□□ 0.43
SRPK1-201ENST00000346162 ATP2B3Q16720 1220 aa17.75■□□□□ 0.43
SRPK1-201ENST00000346162 TMEM67Q5HYA8 995 aa17.75■□□□□ 0.43
SRPK1-201ENST00000346162 DCAF5Q96JK2 942 aa17.75■□□□□ 0.43
SRPK1-201ENST00000346162 HOXB7P09629 217 aa17.75■□□□□ 0.43
SRPK1-201ENST00000346162 DNM1Q05193 864 aaKnown RBP17.75■□□□□ 0.43
SRPK1-201ENST00000346162 SSRP1Q08945 709 aaKnown RBP17.75■□□□□ 0.43
SRPK1-201ENST00000346162 TAX1BP1Q86VP1 789 aa17.75■□□□□ 0.43
SRPK1-201ENST00000346162 ZNF622Q969S3 477 aaKnown RBP eCLIP17.75■□□□□ 0.435e-8■■□□□ 12.2
SRPK1-201ENST00000346162 DACT1Q9NYF0 836 aa17.75■□□□□ 0.43
SRPK1-201ENST00000346162 ERLIN2O94905 339 aa17.74■□□□□ 0.43
SRPK1-201ENST00000346162 USP5P45974 858 aa17.74■□□□□ 0.43
SRPK1-201ENST00000346162 MKNK2Q9HBH9 465 aa17.74■□□□□ 0.43
SRPK1-201ENST00000346162 ZRSR2Q15696 482 aaKnown RBP17.74■□□□□ 0.43
SRPK1-201ENST00000346162 LGR6Q9HBX8 967 aa17.74■□□□□ 0.43
SRPK1-201ENST00000346162 RBM28Q9NW13 759 aaKnown RBP17.74■□□□□ 0.43
SRPK1-201ENST00000346162 BICC1Q9H694 974 aaKnown RBP17.74■□□□□ 0.43
SRPK1-201ENST00000346162 PNMA6EA0A0J9YXQ4 647 aa17.74■□□□□ 0.43
SRPK1-201ENST00000346162 KLF18A0A0U1RQI7 1052 aa17.74■□□□□ 0.43
SRPK1-201ENST00000346162 CREB3L3Q68CJ9 461 aa17.74■□□□□ 0.43
SRPK1-201ENST00000346162 CCDC144CPQ8IYA2 1237 aa17.74■□□□□ 0.43
SRPK1-201ENST00000346162 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
SRPK1-201ENST00000346162 USP19O94966 1318 aa17.73■□□□□ 0.43
SRPK1-201ENST00000346162 EVCP57679 992 aa17.73■□□□□ 0.43
SRPK1-201ENST00000346162 DNAJC21Q5F1R6 531 aaKnown RBP17.73■□□□□ 0.43
SRPK1-201ENST00000346162 Q6ZUG5 572 aa17.73■□□□□ 0.43
SRPK1-201ENST00000346162 LUC7LQ9NQ29 371 aaKnown RBP17.73■□□□□ 0.43
SRPK1-201ENST00000346162 TTC37Q6PGP7 1564 aa17.73■□□□□ 0.43
SRPK1-201ENST00000346162 METAP2P50579 478 aaKnown RBP eCLIP17.73■□□□□ 0.432e-7■■■□□ 17.1
SRPK1-201ENST00000346162 DZIP1Q86YF9 867 aaKnown RBP17.73■□□□□ 0.43
SRPK1-201ENST00000346162 GOLGA1Q92805 767 aa17.73■□□□□ 0.43
SRPK1-201ENST00000346162 CDC5LQ99459 802 aaKnown RBP17.73■□□□□ 0.43
SRPK1-201ENST00000346162 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
SRPK1-201ENST00000346162 CPSF2Q9P2I0 782 aaKnown RBP17.73■□□□□ 0.43
SRPK1-201ENST00000346162 BIN1O00499 593 aa17.73■□□□□ 0.43
SRPK1-201ENST00000346162 UQCRFS1P1P0C7P4 283 aa17.73■□□□□ 0.43
SRPK1-201ENST00000346162 CNNM3Q8NE01 707 aa17.73■□□□□ 0.43
SRPK1-201ENST00000346162 ABCC4O15439 1325 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms