RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 CASTP20810 708 aaKnown RBP22.34■■□□□ 1.17
HOXA9-201ENST00000343483 NECTIN1Q15223 517 aa22.34■■□□□ 1.17
HOXA9-201ENST00000343483 KBTBD3Q8NAB2 608 aa22.34■■□□□ 1.17
HOXA9-201ENST00000343483 CHGBP05060 677 aa22.34■■□□□ 1.17
HOXA9-201ENST00000343483 IFIT1P09914 478 aaKnown RBP22.34■■□□□ 1.17
HOXA9-201ENST00000343483 KCNQ4P56696 695 aa22.34■■□□□ 1.17
HOXA9-201ENST00000343483 METTL24Q5JXM2 366 aa22.34■■□□□ 1.17
HOXA9-201ENST00000343483 CLEC17AQ6ZS10 378 aa22.34■■□□□ 1.17
HOXA9-201ENST00000343483 CNNM1Q9NRU3 951 aa22.34■■□□□ 1.17
HOXA9-201ENST00000343483 SH3TC1Q8TE82 1336 aa22.33■■□□□ 1.17
HOXA9-201ENST00000343483 ADORA1P30542 326 aa22.33■■□□□ 1.17
HOXA9-201ENST00000343483 CREB3L3Q68CJ9 461 aa22.33■■□□□ 1.17
HOXA9-201ENST00000343483 JAKMIP1Q96N16 626 aaKnown RBP22.33■■□□□ 1.17
HOXA9-201ENST00000343483 HCLS1P14317 486 aaPredicted RBP22.32■■□□□ 1.16
HOXA9-201ENST00000343483 SKOR2Q2VWA4 1001 aaPredicted RBP22.32■■□□□ 1.16
HOXA9-201ENST00000343483 ADCK5Q3MIX3 580 aa22.32■■□□□ 1.16
HOXA9-201ENST00000343483 CCDC158Q5M9N0 1113 aa22.32■■□□□ 1.16
HOXA9-201ENST00000343483 LINC00116Q8NCU8 138 aa22.32■■□□□ 1.16
HOXA9-201ENST00000343483 XAGE2Q96GT9 111 aa22.32■■□□□ 1.16
HOXA9-201ENST00000343483 UTP14AQ9BVJ6 771 aaKnown RBP22.32■■□□□ 1.16
HOXA9-201ENST00000343483 RIPOR2Q9Y4F9 1068 aa22.32■■□□□ 1.16
HOXA9-201ENST00000343483 CICQ96RK0 1608 aaPredicted RBP22.32■■□□□ 1.16
HOXA9-201ENST00000343483 RREB1Q92766 1687 aa22.32■■□□□ 1.16
HOXA9-201ENST00000343483 GOLGA6L22H0YM25 854 aa22.32■■□□□ 1.16
HOXA9-201ENST00000343483 CPA1P15085 419 aa22.32■■□□□ 1.16
HOXA9-201ENST00000343483 KCNB2Q92953 911 aa22.32■■□□□ 1.16
HOXA9-201ENST00000343483 NIP7Q9Y221 180 aaKnown RBP eCLIP22.32■■□□□ 1.16
HOXA9-201ENST00000343483 RIC1Q4ADV7 1423 aa22.32■■□□□ 1.16
HOXA9-201ENST00000343483 FSD2A1L4K1 749 aa22.31■■□□□ 1.16
HOXA9-201ENST00000343483 CUL4AQ13619 759 aa22.31■■□□□ 1.16
HOXA9-201ENST00000343483 TTC39AQ5SRH9 613 aa22.31■■□□□ 1.16
HOXA9-201ENST00000343483 TTC14Q96N46 770 aa22.31■■□□□ 1.16
HOXA9-201ENST00000343483 TAF5LO75529 589 aa22.3■■□□□ 1.16
HOXA9-201ENST00000343483 BAG4O95429 457 aaKnown RBP22.3■■□□□ 1.16
HOXA9-201ENST00000343483 PKP1Q13835 747 aa22.3■■□□□ 1.16
HOXA9-201ENST00000343483 PARP10Q53GL7 1025 aa22.3■■□□□ 1.16
HOXA9-201ENST00000343483 SEC62Q99442 399 aaKnown RBP22.3■■□□□ 1.16
HOXA9-201ENST00000343483 TNS1Q9HBL0 1735 aaKnown RBP22.3■■□□□ 1.16
HOXA9-201ENST00000343483 SLC27A2O14975 620 aa22.3■■□□□ 1.16
HOXA9-201ENST00000343483 CYP2E1P05181 493 aaPredicted RBP22.3■■□□□ 1.16
HOXA9-201ENST00000343483 AK2P54819 239 aa22.3■■□□□ 1.16
HOXA9-201ENST00000343483 ATP2B3Q16720 1220 aa22.3■■□□□ 1.16
HOXA9-201ENST00000343483 MCMDC2Q4G0Z9 681 aa22.3■■□□□ 1.16
HOXA9-201ENST00000343483 RNF20Q5VTR2 975 aa22.3■■□□□ 1.16
HOXA9-201ENST00000343483 CCDC129Q6ZRS4 1044 aa22.3■■□□□ 1.16
HOXA9-201ENST00000343483 AK7Q96M32 723 aa22.3■■□□□ 1.16
HOXA9-201ENST00000343483 MYH14Q7Z406 1995 aaKnown RBP22.3■■□□□ 1.16
HOXA9-201ENST00000343483 FKBP4Q02790 459 aaKnown RBP eCLIP22.29■■□□□ 1.16
HOXA9-201ENST00000343483 EN1Q05925 392 aaPredicted RBP22.29■■□□□ 1.16
HOXA9-201ENST00000343483 ZNF652Q9Y2D9 606 aa22.29■■□□□ 1.16
HOXA9-201ENST00000343483 SRCAPQ6ZRS2 3230 aa22.29■■□□□ 1.16
HOXA9-201ENST00000343483 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.29■■□□□ 1.16
HOXA9-201ENST00000343483 CYP46A1Q9Y6A2 500 aa22.29■■□□□ 1.16
HOXA9-201ENST00000343483 APBA3O96018 575 aa22.28■■□□□ 1.16
HOXA9-201ENST00000343483 INTS4Q96HW7 963 aaKnown RBP22.28■■□□□ 1.16
HOXA9-201ENST00000343483 LARP6Q9BRS8 491 aaKnown RBP22.28■■□□□ 1.16
HOXA9-201ENST00000343483 TM6SF1Q9BZW5 370 aa22.28■■□□□ 1.16
HOXA9-201ENST00000343483 ZSWIM6Q9HCJ5 1215 aa22.28■■□□□ 1.16
HOXA9-201ENST00000343483 PDRG1Q9NUG6 133 aa22.27■■□□□ 1.16
HOXA9-201ENST00000343483 SLFNL1Q499Z3 407 aa22.27■■□□□ 1.16
HOXA9-201ENST00000343483 RUFY3Q7L099 469 aa22.27■■□□□ 1.16
HOXA9-201ENST00000343483 COL5A3P25940 1745 aaPredicted RBP22.26■■□□□ 1.15
HOXA9-201ENST00000343483 NTSR2O95665 410 aa22.26■■□□□ 1.15
HOXA9-201ENST00000343483 SF3B2Q13435 895 aaKnown RBP22.26■■□□□ 1.15
HOXA9-201ENST00000343483 LIMCH1Q9UPQ0 1083 aa22.26■■□□□ 1.15
HOXA9-201ENST00000343483 MYH3P11055 1940 aa22.26■■□□□ 1.15
HOXA9-201ENST00000343483 VPS53Q5VIR6 699 aa22.26■■□□□ 1.15
HOXA9-201ENST00000343483 VGLL2Q8N8G2 317 aa22.26■■□□□ 1.15
HOXA9-201ENST00000343483 PSMA5P28066 241 aa22.25■■□□□ 1.15
HOXA9-201ENST00000343483 SCARF1Q14162 830 aa22.25■■□□□ 1.15
HOXA9-201ENST00000343483 PDE8BO95263 885 aa22.24■■□□□ 1.15
HOXA9-201ENST00000343483 XRCC6P12956 609 aaKnown RBP eCLIP22.24■■□□□ 1.15
HOXA9-201ENST00000343483 CCDC125Q86Z20 511 aa22.24■■□□□ 1.15
HOXA9-201ENST00000343483 RTN4Q9NQC3 1192 aaKnown RBP22.24■■□□□ 1.15
HOXA9-201ENST00000343483 HELLSQ9NRZ9 838 aa22.24■■□□□ 1.15
HOXA9-201ENST00000343483 HMG20BQ9P0W2 317 aa22.24■■□□□ 1.15
HOXA9-201ENST00000343483 TAF6LQ9Y6J9 622 aa22.24■■□□□ 1.15
HOXA9-201ENST00000343483 RPAP1Q9BWH6 1393 aaPredicted RBP22.24■■□□□ 1.15
HOXA9-201ENST00000343483 CNTNAP4Q9C0A0 1308 aa22.24■■□□□ 1.15
HOXA9-201ENST00000343483 EZH2Q15910 746 aaKnown RBP22.24■■□□□ 1.15
HOXA9-201ENST00000343483 USPL1Q5W0Q7 1092 aa22.24■■□□□ 1.15
HOXA9-201ENST00000343483 RNF113AO15541 343 aaKnown RBP22.23■■□□□ 1.15
HOXA9-201ENST00000343483 HSP90B1P14625 803 aaKnown RBP22.23■■□□□ 1.15
HOXA9-201ENST00000343483 CCDC152Q4G0S7 254 aa22.23■■□□□ 1.15
HOXA9-201ENST00000343483 ZMYM1Q5SVZ6 1142 aa22.23■■□□□ 1.15
HOXA9-201ENST00000343483 MCTP1Q6DN14 999 aa22.23■■□□□ 1.15
HOXA9-201ENST00000343483 CLEC4GQ6UXB4 293 aa22.23■■□□□ 1.15
HOXA9-201ENST00000343483 SMIM5Q71RC9 77 aa22.23■■□□□ 1.15
HOXA9-201ENST00000343483 TICAM2Q86XR7 235 aa22.23■■□□□ 1.15
HOXA9-201ENST00000343483 BCL11BQ9C0K0 894 aaPredicted RBP22.23■■□□□ 1.15
HOXA9-201ENST00000343483 SEC31BQ9NQW1 1179 aa22.23■■□□□ 1.15
HOXA9-201ENST00000343483 ZNF831Q5JPB2 1677 aa22.23■■□□□ 1.15
HOXA9-201ENST00000343483 PI16Q6UXB8 463 aa22.22■■□□□ 1.15
HOXA9-201ENST00000343483 HELBQ8NG08 1087 aaPredicted RBP22.22■■□□□ 1.15
HOXA9-201ENST00000343483 MPHOSPH8Q99549 860 aa22.22■■□□□ 1.15
HOXA9-201ENST00000343483 ZDHHC9Q9Y397 364 aa22.22■■□□□ 1.15
HOXA9-201ENST00000343483 U3KPZ7 1027 aaPredicted RBP22.22■■□□□ 1.15
HOXA9-201ENST00000343483 MROH5Q6ZUA9 1318 aa22.22■■□□□ 1.15
HOXA9-201ENST00000343483 ZAP70P43403 619 aa22.22■■□□□ 1.15
HOXA9-201ENST00000343483 ABCC12Q96J65 1359 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms