RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 IFT57Q9NWB7 429 aa4.6□□□□□ -1.67
CCDC66-202ENST00000341455 NUP98P52948 1817 aa4.6□□□□□ -1.67
CCDC66-202ENST00000341455 CHL1O00533 1208 aa4.6□□□□□ -1.67
CCDC66-202ENST00000341455 EIF5BO60841 1220 aaKnown RBP4.6□□□□□ -1.67
CCDC66-202ENST00000341455 HMGB1P09429 215 aaKnown RBP4.6□□□□□ -1.67
CCDC66-202ENST00000341455 CT47B1P0C2W7 299 aaPredicted RBP4.6□□□□□ -1.67
CCDC66-202ENST00000341455 VEGFAP15692 232 aaPredicted RBP4.6□□□□□ -1.67
CCDC66-202ENST00000341455 TMPOP42166 694 aaKnown RBP4.6□□□□□ -1.67
CCDC66-202ENST00000341455 PKN2Q16513 984 aaKnown RBP4.6□□□□□ -1.67
CCDC66-202ENST00000341455 PRKAR2BP31323 418 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 CALD1Q05682 793 aaKnown RBP4.59□□□□□ -1.67
CCDC66-202ENST00000341455 PROX2Q3B8N5 592 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 PARP9Q8IXQ6 854 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 AIDAQ96BJ3 306 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 PHACTR3Q96KR7 559 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 NLRP2Q9NX02 1062 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 ADAMTS8Q9UP79 889 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 COL15A1P39059 1388 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 A0A1W2PPC1 479 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 FOXN1O15353 648 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 HSP90B1P14625 803 aaKnown RBP4.59□□□□□ -1.67
CCDC66-202ENST00000341455 CDK11BP21127 795 aaKnown RBP4.59□□□□□ -1.67
CCDC66-202ENST00000341455 SMCPP49901 116 aaPredicted RBP4.59□□□□□ -1.67
CCDC66-202ENST00000341455 CCDC184Q52MB2 194 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 IL17REQ8NFR9 667 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 MTRQ99707 1265 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 PGAP2Q9UHJ9 254 aa4.59□□□□□ -1.67
CCDC66-202ENST00000341455 ZBED9Q6R2W3 1325 aa4.59□□□□□ -1.68
CCDC66-202ENST00000341455 E9PSI1 815 aa4.59□□□□□ -1.68
CCDC66-202ENST00000341455 LMNB1P20700 586 aa4.59□□□□□ -1.68
CCDC66-202ENST00000341455 ZNF598Q86UK7 904 aaKnown RBP4.59□□□□□ -1.68
CCDC66-202ENST00000341455 COL2A1P02458 1487 aaPredicted RBP4.58□□□□□ -1.68
CCDC66-202ENST00000341455 SPDYE16A6NNV3 312 aaPredicted RBP4.58□□□□□ -1.68
CCDC66-202ENST00000341455 GPR37O15354 613 aa4.58□□□□□ -1.68
CCDC66-202ENST00000341455 DIEXFQ68CQ4 756 aaKnown RBP4.58□□□□□ -1.68
CCDC66-202ENST00000341455 PTF1AQ7RTS3 328 aa4.58□□□□□ -1.68
CCDC66-202ENST00000341455 LRP10Q7Z4F1 713 aa4.58□□□□□ -1.68
CCDC66-202ENST00000341455 STRN4Q9NRL3 753 aa4.58□□□□□ -1.68
CCDC66-202ENST00000341455 POTECB2RU33 542 aa4.58□□□□□ -1.68
CCDC66-202ENST00000341455 NBPF26B4DH59 902 aa4.58□□□□□ -1.68
CCDC66-202ENST00000341455 POM121Q96HA1 1249 aa4.58□□□□□ -1.68
CCDC66-202ENST00000341455 CCNL1Q9UK58 526 aaPredicted RBP4.58□□□□□ -1.68
CCDC66-202ENST00000341455 ARAP2Q8WZ64 1704 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 IQCA1LA6NCM1 817 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 CSB-PGBD3P0DP91 1061 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 ECE1P42892 770 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 FAM182BQ5T319 152 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 ZNF530Q6P9A1 599 aaPredicted RBP4.57□□□□□ -1.68
CCDC66-202ENST00000341455 ATG3Q9NT62 314 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 ECM29Q5VYK3 1845 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 AKAP11Q9UKA4 1901 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 COL1A1P02452 1464 aaPredicted RBP4.57□□□□□ -1.68
CCDC66-202ENST00000341455 MYH3P11055 1940 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 WDR43Q15061 677 aaKnown RBP eCLIP4.57□□□□□ -1.68
CCDC66-202ENST00000341455 AMHR2Q16671 573 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 WWC1Q8IX03 1113 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 PIGBQ92521 554 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 TEX13AQ9BXU3 409 aaPredicted RBP4.57□□□□□ -1.68
CCDC66-202ENST00000341455 TFCP2L1Q9NZI6 479 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 COL4A1P02462 1669 aa4.57□□□□□ -1.68
CCDC66-202ENST00000341455 FAM181BA6NEQ2 426 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 AVPP01185 164 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 U2AF1L5P0DN76 240 aaPredicted RBP4.56□□□□□ -1.68
CCDC66-202ENST00000341455 TM4SF1P30408 202 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 U2AF1Q01081 240 aaKnown RBP eCLIP4.56□□□□□ -1.68
CCDC66-202ENST00000341455 TAF7Q15545 349 aaPredicted RBP4.56□□□□□ -1.68
CCDC66-202ENST00000341455 CTC1Q2NKJ3 1217 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 PKDCCQ504Y2 493 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 C1orf141Q5JVX7 400 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 USHBP1Q8N6Y0 703 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 ANKLE1Q8NAG6 615 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 CCDC102AQ96A19 550 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 CHMP4AQ9BY43 222 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 RNF123Q5XPI4 1314 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 KAT6BQ8WYB5 2073 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 KLRG2A4D1S0 409 aaPredicted RBP4.56□□□□□ -1.68
CCDC66-202ENST00000341455 TMEM88BA6NKF7 163 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 SLC4A3P48751 1232 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 C9orf131Q5VYM1 1079 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 PIM2Q9P1W9 311 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 EIF4A1P60842 406 aaKnown RBP4.56□□□□□ -1.68
CCDC66-202ENST00000341455 SLF2Q8IX21 1173 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 MRS2Q9HD23 443 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 NMRK2Q9NPI5 230 aa4.56□□□□□ -1.68
CCDC66-202ENST00000341455 MAPK8IP3Q9UPT6 1336 aa4.55□□□□□ -1.68
CCDC66-202ENST00000341455 RPS6KA4O75676 772 aa4.55□□□□□ -1.68
CCDC66-202ENST00000341455 MMP14P50281 582 aa4.55□□□□□ -1.68
CCDC66-202ENST00000341455 GNAI1P63096 354 aa4.55□□□□□ -1.68
CCDC66-202ENST00000341455 STYK1Q6J9G0 422 aa4.55□□□□□ -1.68
CCDC66-202ENST00000341455 SLC4A9Q96Q91 983 aa4.55□□□□□ -1.68
CCDC66-202ENST00000341455 POLR3GLQ9BT43 218 aa4.55□□□□□ -1.68
CCDC66-202ENST00000341455 TLL2Q9Y6L7 1015 aa4.55□□□□□ -1.68
CCDC66-202ENST00000341455 HMOX1P09601 288 aa4.55□□□□□ -1.68
CCDC66-202ENST00000341455 SLFN5Q08AF3 891 aa4.55□□□□□ -1.68
CCDC66-202ENST00000341455 FAM161AQ3B820 660 aa4.55□□□□□ -1.68
CCDC66-202ENST00000341455 DALRD3Q5D0E6 543 aaKnown RBP4.55□□□□□ -1.68
CCDC66-202ENST00000341455 ZNF790Q6PG37 636 aa4.55□□□□□ -1.68
CCDC66-202ENST00000341455 PCMTD1Q96MG8 357 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms