RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 HOXB7P09629 217 aa22.3■■□□□ 1.16
CDK13-202ENST00000340829 LEKR1Q6ZMV7 388 aa22.3■■□□□ 1.16
CDK13-202ENST00000340829 NUP88Q99567 741 aaPredicted RBP22.3■■□□□ 1.16
CDK13-202ENST00000340829 RTN1Q16799 776 aa22.29■■□□□ 1.16
CDK13-202ENST00000340829 FKBP15Q5T1M5 1219 aa22.29■■□□□ 1.16
CDK13-202ENST00000340829 STX8Q9UNK0 236 aa22.29■■□□□ 1.16
CDK13-202ENST00000340829 YEATS2Q9ULM3 1422 aa22.29■■□□□ 1.16
CDK13-202ENST00000340829 KIF5CO60282 957 aa22.29■■□□□ 1.16
CDK13-202ENST00000340829 FAM193AP78312 1265 aa22.29■■□□□ 1.16
CDK13-202ENST00000340829 SLF2Q8IX21 1173 aa22.29■■□□□ 1.16
CDK13-202ENST00000340829 KAT6BQ8WYB5 2073 aa22.29■■□□□ 1.16
CDK13-202ENST00000340829 RFC4P35249 363 aa22.29■■□□□ 1.16
CDK13-202ENST00000340829 KIF4BQ2VIQ3 1234 aa22.29■■□□□ 1.16
CDK13-202ENST00000340829 CCDC129Q6ZRS4 1044 aa22.29■■□□□ 1.16
CDK13-202ENST00000340829 DHX32Q7L7V1 743 aaKnown RBP22.29■■□□□ 1.16
CDK13-202ENST00000340829 ESR2Q92731 530 aa22.29■■□□□ 1.16
CDK13-202ENST00000340829 EIF3JO75822 258 aaKnown RBP22.28■■□□□ 1.16
CDK13-202ENST00000340829 TMEM266Q2M3C6 531 aa22.28■■□□□ 1.16
CDK13-202ENST00000340829 METTL22Q9BUU2 404 aaPredicted RBP22.28■■□□□ 1.16
CDK13-202ENST00000340829 RAB34Q9BZG1 259 aa22.28■■□□□ 1.16
CDK13-202ENST00000340829 PTPDC1A2A3K4 754 aa22.28■■□□□ 1.16
CDK13-202ENST00000340829 CNNM2Q9H8M5 875 aa22.28■■□□□ 1.16
CDK13-202ENST00000340829 TMEM2Q9UHN6 1383 aa22.28■■□□□ 1.16
CDK13-202ENST00000340829 ABCC4O15439 1325 aa22.28■■□□□ 1.16
CDK13-202ENST00000340829 CASQ1P31415 396 aa22.28■■□□□ 1.16
CDK13-202ENST00000340829 DDB1Q16531 1140 aa22.28■■□□□ 1.16
CDK13-202ENST00000340829 LTKP29376 864 aa22.28■■□□□ 1.16
CDK13-202ENST00000340829 SPTY2D1Q68D10 685 aaPredicted RBP22.27■■□□□ 1.16
CDK13-202ENST00000340829 TRMT2AQ8IZ69 625 aaKnown RBP22.27■■□□□ 1.16
CDK13-202ENST00000340829 DBNDD2Q9BQY9 259 aa22.27■■□□□ 1.16
CDK13-202ENST00000340829 UTP14AQ9BVJ6 771 aaKnown RBP22.27■■□□□ 1.16
CDK13-202ENST00000340829 PCDH11XQ9BZA7 1347 aa22.27■■□□□ 1.16
CDK13-202ENST00000340829 PCDH11YQ9BZA8 1340 aa22.27■■□□□ 1.16
CDK13-202ENST00000340829 CLCN1P35523 988 aa22.27■■□□□ 1.16
CDK13-202ENST00000340829 HSP90AA4PQ58FG1 418 aa22.27■■□□□ 1.16
CDK13-202ENST00000340829 TMCO3Q6UWJ1 677 aa22.27■■□□□ 1.16
CDK13-202ENST00000340829 FAM89AQ96GI7 184 aa22.27■■□□□ 1.16
CDK13-202ENST00000340829 CCDC186Q7Z3E2 898 aa22.27■■□□□ 1.16
CDK13-202ENST00000340829 PLEKHF1Q96S99 279 aa22.27■■□□□ 1.16
CDK13-202ENST00000340829 UBA7P41226 1012 aa22.27■■□□□ 1.16
CDK13-202ENST00000340829 SPA17Q15506 151 aa22.27■■□□□ 1.16
CDK13-202ENST00000340829 IFIT1BQ5T764 474 aaKnown RBP22.27■■□□□ 1.16
CDK13-202ENST00000340829 SUCLG2Q96I99 432 aa22.27■■□□□ 1.16
CDK13-202ENST00000340829 CCDC148Q8NFR7 591 aa22.26■■□□□ 1.15
CDK13-202ENST00000340829 FAM227BQ96M60 508 aa22.26■■□□□ 1.15
CDK13-202ENST00000340829 UBA5Q9GZZ9 404 aa22.26■■□□□ 1.15
CDK13-202ENST00000340829 SNX14Q9Y5W7 946 aa22.26■■□□□ 1.15
CDK13-202ENST00000340829 TTC37Q6PGP7 1564 aa22.26■■□□□ 1.15
CDK13-202ENST00000340829 TCP11L1Q9NUJ3 509 aa22.26■■□□□ 1.15
CDK13-202ENST00000340829 TNNI3KQ59H18 835 aa22.26■■□□□ 1.15
CDK13-202ENST00000340829 IQCEQ6IPM2 695 aa22.26■■□□□ 1.15
CDK13-202ENST00000340829 TTC12Q9H892 705 aaPredicted RBP22.26■■□□□ 1.15
CDK13-202ENST00000340829 FPGT-TNNI3KV9GXZ4 949 aa22.26■■□□□ 1.15
CDK13-202ENST00000340829 NEO1Q92859 1461 aa22.26■■□□□ 1.15
CDK13-202ENST00000340829 SGSM2O43147 1006 aa22.26■■□□□ 1.15
CDK13-202ENST00000340829 TYRO3Q06418 890 aa22.26■■□□□ 1.15
CDK13-202ENST00000340829 NAA16Q6N069 864 aaPredicted RBP22.26■■□□□ 1.15
CDK13-202ENST00000340829 CCDC102AQ96A19 550 aa22.26■■□□□ 1.15
CDK13-202ENST00000340829 CACNA2D4Q7Z3S7 1137 aa22.25■■□□□ 1.15
CDK13-202ENST00000340829 MIGA1Q8NAN2 632 aa22.25■■□□□ 1.15
CDK13-202ENST00000340829 ARHGEF10O15013 1369 aa22.25■■□□□ 1.15
CDK13-202ENST00000340829 KIAA0232Q92628 1395 aa22.25■■□□□ 1.15
CDK13-202ENST00000340829 IDEP14735 1019 aa22.25■■□□□ 1.15
CDK13-202ENST00000340829 TMTC2Q8N394 836 aa22.25■■□□□ 1.15
CDK13-202ENST00000340829 TSG101Q99816 390 aa22.25■■□□□ 1.15
CDK13-202ENST00000340829 DTNBO60941 627 aa22.25■■□□□ 1.15
CDK13-202ENST00000340829 EIF4A1P60842 406 aaKnown RBP22.25■■□□□ 1.15
CDK13-202ENST00000340829 PLBD2Q8NHP8 589 aa22.25■■□□□ 1.15
CDK13-202ENST00000340829 RXRAP19793 462 aa22.25■■□□□ 1.15
CDK13-202ENST00000340829 KANK3Q6NY19 840 aa22.25■■□□□ 1.15
CDK13-202ENST00000340829 AOPEPQ8N6M6 819 aa22.25■■□□□ 1.15
CDK13-202ENST00000340829 SETDB2Q96T68 719 aa22.25■■□□□ 1.15
CDK13-202ENST00000340829 H0YHG0 523 aa22.24■■□□□ 1.15
CDK13-202ENST00000340829 PRKCSHP14314 528 aaPredicted RBP22.24■■□□□ 1.15
CDK13-202ENST00000340829 AFMP43652 599 aa22.24■■□□□ 1.15
CDK13-202ENST00000340829 CBX1P83916 185 aa22.24■■□□□ 1.15
CDK13-202ENST00000340829 ENOX2Q16206 610 aaKnown RBP22.24■■□□□ 1.15
CDK13-202ENST00000340829 NLRP3Q96P20 1036 aa22.24■■□□□ 1.15
CDK13-202ENST00000340829 CENPHQ9H3R5 247 aa22.24■■□□□ 1.15
CDK13-202ENST00000340829 SPTLC2O15270 562 aa22.24■■□□□ 1.15
CDK13-202ENST00000340829 MAGEB6Q8N7X4 407 aa22.24■■□□□ 1.15
CDK13-202ENST00000340829 A0A1B0GUL7 405 aa22.24■■□□□ 1.15
CDK13-202ENST00000340829 CCDC12Q8WUD4 166 aaPredicted RBP22.24■■□□□ 1.15
CDK13-202ENST00000340829 SLC27A2O14975 620 aa22.23■■□□□ 1.15
CDK13-202ENST00000340829 ERLIN2O94905 339 aa22.23■■□□□ 1.15
CDK13-202ENST00000340829 GSPT1P15170 499 aaKnown RBP22.23■■□□□ 1.15
CDK13-202ENST00000340829 SNW1Q13573 536 aaKnown RBP22.23■■□□□ 1.15
CDK13-202ENST00000340829 GOLGA6L10A6NI86 522 aa22.23■■□□□ 1.15
CDK13-202ENST00000340829 SLC52A2Q9HAB3 445 aa22.23■■□□□ 1.15
CDK13-202ENST00000340829 ZNF521Q96K83 1311 aa22.23■■□□□ 1.15
CDK13-202ENST00000340829 EYA2O00167 538 aa22.23■■□□□ 1.15
CDK13-202ENST00000340829 TAF4BQ92750 862 aa22.23■■□□□ 1.15
CDK13-202ENST00000340829 NDUFB9Q9Y6M9 179 aa22.23■■□□□ 1.15
CDK13-202ENST00000340829 AOX1Q06278 1338 aa22.23■■□□□ 1.15
CDK13-202ENST00000340829 MTIF2P46199 727 aaKnown RBP22.23■■□□□ 1.15
CDK13-202ENST00000340829 ZKSCAN5Q9Y2L8 839 aa22.23■■□□□ 1.15
CDK13-202ENST00000340829 YEATS4O95619 227 aa22.22■■□□□ 1.15
CDK13-202ENST00000340829 NOLC1Q14978 699 aaKnown RBP eCLIP22.22■■□□□ 1.15
CDK13-202ENST00000340829 IL17REQ8NFR9 667 aa22.22■■□□□ 1.15
CDK13-202ENST00000340829 ZNF594Q96JF6 807 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms