RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 SDSP20132 328 aa14.85□□□□□ -0.03
DNMT1-201ENST00000340748 SNRKQ9NRH2 765 aa14.85□□□□□ -0.03
DNMT1-201ENST00000340748 SPATA31A3Q5VYP0 1347 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 LOC102724428A0A0B4J2F2 783 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 HCLS1P14317 486 aaPredicted RBP14.84□□□□□ -0.03
DNMT1-201ENST00000340748 SIK1P57059 783 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 KSR2Q6VAB6 950 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 KIAA1328Q86T90 577 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 MEIS3Q99687 375 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 RAB34Q9BZG1 259 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 MBD5Q9P267 1494 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 TNIP1Q15025 636 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 R3HDM1Q15032 1099 aaKnown RBP14.84□□□□□ -0.03
DNMT1-201ENST00000340748 A1BGP04217 495 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 KLHL40Q2TBA0 621 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 UVSSAQ2YD98 709 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 PDCL2Q8N4E4 241 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 CCDC148Q8NFR7 591 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 H0YHG0 523 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 CAVIN2O95810 425 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 PDE1AP54750 535 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 LMBR1LQ6UX01 489 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 NCOA7Q8NI08 942 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 SH3TC1Q8TE82 1336 aa14.84□□□□□ -0.03
DNMT1-201ENST00000340748 UBE2HP62256 183 aa14.83□□□□□ -0.03
DNMT1-201ENST00000340748 CUL5Q93034 780 aa14.83□□□□□ -0.03
DNMT1-201ENST00000340748 TSG101Q99816 390 aa14.83□□□□□ -0.03
DNMT1-201ENST00000340748 WDR17Q8IZU2 1322 aa14.83□□□□□ -0.03
DNMT1-201ENST00000340748 PPP1R12BO60237 982 aaPredicted RBP14.83□□□□□ -0.04
DNMT1-201ENST00000340748 PTPN14Q15678 1187 aa14.83□□□□□ -0.04
DNMT1-201ENST00000340748 FSIP1Q8NA03 581 aa14.83□□□□□ -0.04
DNMT1-201ENST00000340748 CRNKL1Q9BZJ0 848 aaKnown RBP14.83□□□□□ -0.04
DNMT1-201ENST00000340748 ZSCAN16Q9H4T2 348 aaPredicted RBP14.83□□□□□ -0.04
DNMT1-201ENST00000340748 STX1AQ16623 288 aa14.83□□□□□ -0.04
DNMT1-201ENST00000340748 FKBP15Q5T1M5 1219 aa14.83□□□□□ -0.04
DNMT1-201ENST00000340748 SNX21Q969T3 373 aa14.83□□□□□ -0.04
DNMT1-201ENST00000340748 JAG2Q9Y219 1238 aa14.83□□□□□ -0.04
DNMT1-201ENST00000340748 SOS1Q07889 1333 aaPredicted RBP14.83□□□□□ -0.04
DNMT1-201ENST00000340748 FGFR1OPO95684 399 aaKnown RBP14.83□□□□□ -0.04
DNMT1-201ENST00000340748 ZFYP08048 801 aaPredicted RBP14.83□□□□□ -0.04
DNMT1-201ENST00000340748 PLS1Q14651 629 aa14.83□□□□□ -0.04
DNMT1-201ENST00000340748 C8orf58Q8NAV2 365 aa14.83□□□□□ -0.04
DNMT1-201ENST00000340748 HELBQ8NG08 1087 aaPredicted RBP14.83□□□□□ -0.04
DNMT1-201ENST00000340748 PYM1Q9BRP8 204 aaKnown RBP14.83□□□□□ -0.04
DNMT1-201ENST00000340748 CLIP2Q9UDT6 1046 aa14.83□□□□□ -0.04
DNMT1-201ENST00000340748 GUCY1B3Q02153 619 aa14.83□□□□□ -0.04
DNMT1-201ENST00000340748 ATP2B3Q16720 1220 aa14.83□□□□□ -0.04
DNMT1-201ENST00000340748 ARAP3Q8WWN8 1544 aa14.82□□□□□ -0.04
DNMT1-201ENST00000340748 CCT2P78371 535 aaKnown RBP14.82□□□□□ -0.04
DNMT1-201ENST00000340748 CNNM3Q8NE01 707 aa14.82□□□□□ -0.04
DNMT1-201ENST00000340748 PREX2Q70Z35 1606 aa14.82□□□□□ -0.04
DNMT1-201ENST00000340748 TOP1P11387 765 aaKnown RBP14.82□□□□□ -0.04
DNMT1-201ENST00000340748 MCM5P33992 734 aa14.82□□□□□ -0.04
DNMT1-201ENST00000340748 KCNQ4P56696 695 aa14.82□□□□□ -0.04
DNMT1-201ENST00000340748 TMEM266Q2M3C6 531 aa14.82□□□□□ -0.04
DNMT1-201ENST00000340748 TAF4BQ92750 862 aa14.82□□□□□ -0.04
DNMT1-201ENST00000340748 ESYT1Q9BSJ8 1104 aa14.82□□□□□ -0.04
DNMT1-201ENST00000340748 USP16Q9Y5T5 823 aa14.82□□□□□ -0.04
DNMT1-201ENST00000340748 IARSP41252 1262 aaKnown RBP14.82□□□□□ -0.04
DNMT1-201ENST00000340748 UBXN4Q92575 508 aa14.82□□□□□ -0.04
DNMT1-201ENST00000340748 TMX3Q96JJ7 454 aa14.82□□□□□ -0.04
DNMT1-201ENST00000340748 PICK1Q9NRD5 415 aa14.82□□□□□ -0.04
DNMT1-201ENST00000340748 GSDMDP57764 484 aa14.81□□□□□ -0.04
DNMT1-201ENST00000340748 DALRD3Q5D0E6 543 aaKnown RBP14.81□□□□□ -0.04
DNMT1-201ENST00000340748 CCDC12Q8WUD4 166 aaPredicted RBP14.81□□□□□ -0.04
DNMT1-201ENST00000340748 GBP3Q9H0R5 595 aa14.81□□□□□ -0.04
DNMT1-201ENST00000340748 CCDC194A0A1B0GVG4 234 aa14.81□□□□□ -0.04
DNMT1-201ENST00000340748 KIF5BP33176 963 aa14.81□□□□□ -0.04
DNMT1-201ENST00000340748 NLRP5P59047 1200 aa14.81□□□□□ -0.04
DNMT1-201ENST00000340748 TMEM67Q5HYA8 995 aa14.81□□□□□ -0.04
DNMT1-201ENST00000340748 USPL1Q5W0Q7 1092 aa14.81□□□□□ -0.04
DNMT1-201ENST00000340748 NPC1L1Q9UHC9 1359 aa14.81□□□□□ -0.04
DNMT1-201ENST00000340748 KIF20AO95235 890 aa14.81□□□□□ -0.04
DNMT1-201ENST00000340748 SPA17Q15506 151 aa14.81□□□□□ -0.04
DNMT1-201ENST00000340748 DCPSQ96C86 337 aaKnown RBP14.81□□□□□ -0.04
DNMT1-201ENST00000340748 LGR6Q9HBX8 967 aa14.81□□□□□ -0.04
DNMT1-201ENST00000340748 FAM89AQ96GI7 184 aa14.8□□□□□ -0.04
DNMT1-201ENST00000340748 MAP3K4Q9Y6R4 1608 aa14.8□□□□□ -0.04
DNMT1-201ENST00000340748 ZSCAN22P10073 491 aaPredicted RBP14.8□□□□□ -0.04
DNMT1-201ENST00000340748 GRM8O00222 908 aa14.8□□□□□ -0.04
DNMT1-201ENST00000340748 TSHZ3Q63HK5 1081 aa14.8□□□□□ -0.04
DNMT1-201ENST00000340748 KANK3Q6NY19 840 aa14.8□□□□□ -0.04
DNMT1-201ENST00000340748 MFSD6Q6ZSS7 791 aa14.8□□□□□ -0.04
DNMT1-201ENST00000340748 KIF18AQ8NI77 898 aa14.8□□□□□ -0.04
DNMT1-201ENST00000340748 PHKG2P15735 406 aa14.8□□□□□ -0.04
DNMT1-201ENST00000340748 METAP2P50579 478 aaKnown RBP eCLIP14.8□□□□□ -0.04
DNMT1-201ENST00000340748 JAKMIP3Q5VZ66 844 aa14.8□□□□□ -0.04
DNMT1-201ENST00000340748 HOOK2Q96ED9 719 aa14.8□□□□□ -0.04
DNMT1-201ENST00000340748 TTC41PQ6P2S7 1318 aa14.8□□□□□ -0.04
DNMT1-201ENST00000340748 CKAP2LQ8IYA6 745 aa14.79□□□□□ -0.04
DNMT1-201ENST00000340748 CCDC191Q8NCU4 936 aa14.79□□□□□ -0.04
DNMT1-201ENST00000340748 SEPT11Q9NVA2 429 aaKnown RBP14.79□□□□□ -0.04
DNMT1-201ENST00000340748 ORC3Q9UBD5 711 aaPredicted RBP14.79□□□□□ -0.04
DNMT1-201ENST00000340748 ABT1Q9ULW3 272 aaKnown RBP14.79□□□□□ -0.04
DNMT1-201ENST00000340748 ABCC3O15438 1527 aa14.79□□□□□ -0.04
DNMT1-201ENST00000340748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.79□□□□□ -0.04
DNMT1-201ENST00000340748 KIF5CO60282 957 aa14.79□□□□□ -0.04
DNMT1-201ENST00000340748 CYP7A1P22680 504 aa14.79□□□□□ -0.04
DNMT1-201ENST00000340748 PDE4BQ07343 736 aa14.79□□□□□ -0.04
DNMT1-201ENST00000340748 SKIDA1Q1XH10 827 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms