RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 GJD4Q96KN9 370 aaPredicted RBP8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 CNNM1Q9NRU3 951 aa8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 SRP68Q9UHB9 627 aaKnown RBP8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 PDE8AO60658 829 aa8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 CIAO1O76071 339 aa8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 METTL24Q5JXM2 366 aa8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 PAG1Q9NWQ8 432 aa8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 ZDHHC9Q9Y397 364 aa8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 ZNF609O15014 1411 aa8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 NWD2Q9ULI1 1742 aa8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 CDHR2Q9BYE9 1310 aa8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 LARGE1O95461 756 aa8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 IFIT1P09914 478 aaKnown RBP8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 KCNJ4P48050 445 aa8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 CREB3L3Q68CJ9 461 aa8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 JAKMIP1Q96N16 626 aaKnown RBP8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 TTC14Q96N46 770 aa8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 GZF1Q9H116 711 aaPredicted RBP8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 PODXL2Q9NZ53 605 aa8.92□□□□□ -0.98
SRFBP1-201ENST00000339397 ANKRD18BA2A2Z9 1011 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 AK2P54819 239 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 RUFY3Q7L099 469 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 KBTBD3Q8NAB2 608 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 SH3TC1Q8TE82 1336 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 SLC27A2O14975 620 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 ZAP70P43403 619 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 GORABQ5T7V8 394 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 VGLL2Q8N8G2 317 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 SMARCC1Q92922 1105 aaPredicted RBP8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 IL17RAQ96F46 866 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 UTP14AQ9BVJ6 771 aaKnown RBP8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 BCL2L12Q9HB09 334 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 GPR108Q9NPR9 543 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 NTSR2O95665 410 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 TBC1D9BQ66K14 1250 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 SLC51AQ86UW1 340 aa8.91□□□□□ -0.98
SRFBP1-201ENST00000339397 MED23Q9ULK4 1368 aa8.9□□□□□ -0.98
SRFBP1-201ENST00000339397 SPATA31A6Q5VVP1 1343 aa8.9□□□□□ -0.98
SRFBP1-201ENST00000339397 MCAMP43121 646 aa8.9□□□□□ -0.98
SRFBP1-201ENST00000339397 GSE1Q14687 1217 aa8.9□□□□□ -0.98
SRFBP1-201ENST00000339397 FOXD4L6Q3SYB3 417 aaPredicted RBP8.9□□□□□ -0.98
SRFBP1-201ENST00000339397 ERFEQ4G0M1 354 aa8.9□□□□□ -0.98
SRFBP1-201ENST00000339397 FOXD4L3Q6VB84 417 aaPredicted RBP8.9□□□□□ -0.98
SRFBP1-201ENST00000339397 SEPT12Q8IYM1 358 aa8.9□□□□□ -0.98
SRFBP1-201ENST00000339397 RIC1Q4ADV7 1423 aa8.9□□□□□ -0.98
SRFBP1-201ENST00000339397 COL4A1P02462 1669 aa8.9□□□□□ -0.98
SRFBP1-201ENST00000339397 GNPATO15228 680 aa8.9□□□□□ -0.99
SRFBP1-201ENST00000339397 PHKA1P46020 1223 aa8.9□□□□□ -0.99
SRFBP1-201ENST00000339397 ATP2B3Q16720 1220 aa8.9□□□□□ -0.99
SRFBP1-201ENST00000339397 TTC39AQ5SRH9 613 aa8.9□□□□□ -0.99
SRFBP1-201ENST00000339397 USPL1Q5W0Q7 1092 aa8.9□□□□□ -0.99
SRFBP1-201ENST00000339397 OSBP2Q969R2 916 aa8.9□□□□□ -0.99
SRFBP1-201ENST00000339397 LRRC4BQ9NT99 713 aa8.9□□□□□ -0.99
SRFBP1-201ENST00000339397 PHF14O94880 888 aa8.89□□□□□ -0.99
SRFBP1-201ENST00000339397 PDE8BO95263 885 aa8.89□□□□□ -0.99
SRFBP1-201ENST00000339397 MCMDC2Q4G0Z9 681 aa8.89□□□□□ -0.99
SRFBP1-201ENST00000339397 QTRT2Q9H974 415 aaKnown RBP8.89□□□□□ -0.99
SRFBP1-201ENST00000339397 CCNL1Q9UK58 526 aaPredicted RBP8.89□□□□□ -0.99
SRFBP1-201ENST00000339397 CIZ1Q9ULV3 898 aaPredicted RBP8.89□□□□□ -0.99
SRFBP1-201ENST00000339397 M0R2C6 588 aa8.89□□□□□ -0.99
SRFBP1-201ENST00000339397 HIP1O00291 1037 aa8.89□□□□□ -0.99
SRFBP1-201ENST00000339397 CUL4AQ13619 759 aa8.89□□□□□ -0.99
SRFBP1-201ENST00000339397 CCDC158Q5M9N0 1113 aa8.89□□□□□ -0.99
SRFBP1-201ENST00000339397 TTLL5Q6EMB2 1281 aa8.89□□□□□ -0.99
SRFBP1-201ENST00000339397 NECAB1Q8N987 351 aa8.89□□□□□ -0.99
SRFBP1-201ENST00000339397 ZSWIM6Q9HCJ5 1215 aa8.89□□□□□ -0.99
SRFBP1-201ENST00000339397 CYP2E1P05181 493 aaPredicted RBP8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 CYP21A2P08686 494 aa8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 KCNB2Q92953 911 aa8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 LRRC2Q9BYS8 371 aa8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 AKAP2Q9Y2D5 859 aa8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 SRCAPQ6ZRS2 3230 aa8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 EPB41L2O43491 1005 aaKnown RBP8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 TRAK2O60296 914 aa8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 ST3GAL1Q11201 340 aa8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 ARHGEF1Q92888 912 aaKnown RBP8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 PUS7LQ9H0K6 701 aaKnown RBP8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 PDRG1Q9NUG6 133 aa8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 IQSEC3Q9UPP2 1182 aaPredicted RBP8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 TAF1P21675 1872 aa8.88□□□□□ -0.99
SRFBP1-201ENST00000339397 FOXP2O15409 715 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 BAG4O95429 457 aaKnown RBP8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 ZKSCAN1P17029 563 aaPredicted RBP8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 ME3Q16798 604 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 ZMYM1Q5SVZ6 1142 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 CCDC102BQ68D86 513 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 STOX1Q6ZVD7 989 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 HOMEZQ8IX15 550 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 MPHOSPH8Q99549 860 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 TPCN1Q9ULQ1 816 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 MAST3O60307 1309 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 HSPD1P10809 573 aaKnown RBP8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 BCAMP50895 628 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 FBXO3Q9UK99 471 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 CYP46A1Q9Y6A2 500 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 RNF113AO15541 343 aaKnown RBP8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 WASHC4Q2M389 1173 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 PARP10Q53GL7 1025 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 MCTP1Q6DN14 999 aa8.87□□□□□ -0.99
SRFBP1-201ENST00000339397 CCDC83Q8IWF9 413 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms