RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 MTMR6Q9Y217 621 aa10.56□□□□□ -0.72
SNCA-201ENST00000336904 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.56□□□□□ -0.72
SNCA-201ENST00000336904 EP400Q96L91 3159 aa10.56□□□□□ -0.72
SNCA-201ENST00000336904 RPS6KB1P23443 525 aa10.55□□□□□ -0.72
SNCA-201ENST00000336904 CAMK4Q16566 473 aa10.55□□□□□ -0.72
SNCA-201ENST00000336904 GIMAP6Q6P9H5 292 aa10.55□□□□□ -0.72
SNCA-201ENST00000336904 KIF6Q6ZMV9 814 aa10.55□□□□□ -0.72
SNCA-201ENST00000336904 DENND2AQ9ULE3 1009 aa10.55□□□□□ -0.72
SNCA-201ENST00000336904 HCLS1P14317 486 aaPredicted RBP10.55□□□□□ -0.72
SNCA-201ENST00000336904 APOBRQ0VD83 1088 aa10.55□□□□□ -0.72
SNCA-201ENST00000336904 FTOQ9C0B1 505 aaKnown RBP eCLIP10.55□□□□□ -0.72
SNCA-201ENST00000336904 ZAP70P43403 619 aa10.55□□□□□ -0.72
SNCA-201ENST00000336904 TCIRG1Q13488 830 aa10.55□□□□□ -0.72
SNCA-201ENST00000336904 MCMDC2Q4G0Z9 681 aa10.55□□□□□ -0.72
SNCA-201ENST00000336904 FAM182BQ5T319 152 aa10.55□□□□□ -0.72
SNCA-201ENST00000336904 CCDC191Q8NCU4 936 aa10.55□□□□□ -0.72
SNCA-201ENST00000336904 XAGE2Q96GT9 111 aa10.55□□□□□ -0.72
SNCA-201ENST00000336904 CEP126Q9P2H0 1117 aa10.55□□□□□ -0.72
SNCA-201ENST00000336904 ESPNB1AK53 854 aa10.54□□□□□ -0.72
SNCA-201ENST00000336904 PTMSP20962 102 aa10.54□□□□□ -0.72
SNCA-201ENST00000336904 ZNF445P59923 1031 aa10.54□□□□□ -0.72
SNCA-201ENST00000336904 TTC39AQ5SRH9 613 aa10.54□□□□□ -0.72
SNCA-201ENST00000336904 RNF20Q5VTR2 975 aa10.54□□□□□ -0.72
SNCA-201ENST00000336904 KBTBD3Q8NAB2 608 aa10.54□□□□□ -0.72
SNCA-201ENST00000336904 NAP1L5Q96NT1 182 aaPredicted RBP10.54□□□□□ -0.72
SNCA-201ENST00000336904 NEK1Q96PY6 1258 aa10.54□□□□□ -0.72
SNCA-201ENST00000336904 TRMT112Q9UI30 125 aaKnown RBP10.54□□□□□ -0.72
SNCA-201ENST00000336904 TOGARAM1Q9Y4F4 1720 aa10.54□□□□□ -0.72
SNCA-201ENST00000336904 OSBP2Q969R2 916 aa10.54□□□□□ -0.72
SNCA-201ENST00000336904 IQSEC3Q9UPP2 1182 aaPredicted RBP10.54□□□□□ -0.72
SNCA-201ENST00000336904 WTIPA6NIX2 430 aaPredicted RBP10.53□□□□□ -0.72
SNCA-201ENST00000336904 HIP1O00291 1037 aa10.53□□□□□ -0.72
SNCA-201ENST00000336904 MAST3O60307 1309 aa10.53□□□□□ -0.72
SNCA-201ENST00000336904 ITGA6P23229 1130 aa10.53□□□□□ -0.72
SNCA-201ENST00000336904 METTL24Q5JXM2 366 aa10.53□□□□□ -0.72
SNCA-201ENST00000336904 LRSAM1Q6UWE0 723 aa10.53□□□□□ -0.72
SNCA-201ENST00000336904 LDHAL6AQ6ZMR3 332 aa10.53□□□□□ -0.72
SNCA-201ENST00000336904 CCDC24Q8N4L8 307 aa10.53□□□□□ -0.72
SNCA-201ENST00000336904 CNNM1Q9NRU3 951 aa10.53□□□□□ -0.72
SNCA-201ENST00000336904 IL15P40933 162 aaPredicted RBP10.53□□□□□ -0.72
SNCA-201ENST00000336904 IFIT5Q13325 482 aaKnown RBP10.53□□□□□ -0.72
SNCA-201ENST00000336904 NKX2-3Q8TAU0 364 aa10.53□□□□□ -0.72
SNCA-201ENST00000336904 ANP32BQ92688 251 aaKnown RBP10.53□□□□□ -0.72
SNCA-201ENST00000336904 GJB4Q9NTQ9 266 aa10.53□□□□□ -0.72
SNCA-201ENST00000336904 A0A087WWV3 80 aa10.52□□□□□ -0.72
SNCA-201ENST00000336904 NKX1-1Q15270 411 aaPredicted RBP10.52□□□□□ -0.72
SNCA-201ENST00000336904 INCENPQ9NQS7 918 aa10.52□□□□□ -0.72
SNCA-201ENST00000336904 EXOC5O00471 708 aa10.52□□□□□ -0.73
SNCA-201ENST00000336904 KCNQ2O43526 872 aa10.52□□□□□ -0.73
SNCA-201ENST00000336904 STARD3NLO95772 234 aa10.52□□□□□ -0.73
SNCA-201ENST00000336904 PSMA5P28066 241 aa10.52□□□□□ -0.73
SNCA-201ENST00000336904 OTUD7BQ6GQQ9 843 aa10.52□□□□□ -0.73
SNCA-201ENST00000336904 ZNF830Q96NB3 372 aaPredicted RBP10.52□□□□□ -0.73
SNCA-201ENST00000336904 ISCA1Q9BUE6 129 aa10.52□□□□□ -0.73
SNCA-201ENST00000336904 PUS7LQ9H0K6 701 aaKnown RBP10.52□□□□□ -0.73
SNCA-201ENST00000336904 SHANK3Q9BYB0 1731 aa10.52□□□□□ -0.73
SNCA-201ENST00000336904 PARP4Q9UKK3 1724 aaKnown RBP10.52□□□□□ -0.73
SNCA-201ENST00000336904 IRS4O14654 1257 aaPredicted RBP10.52□□□□□ -0.73
SNCA-201ENST00000336904 HSPD1P10809 573 aaKnown RBP10.52□□□□□ -0.73
SNCA-201ENST00000336904 RXRAP19793 462 aa10.52□□□□□ -0.73
SNCA-201ENST00000336904 TTC6Q86TZ1 520 aa10.52□□□□□ -0.73
SNCA-201ENST00000336904 DZIP3Q86Y13 1208 aaKnown RBP10.52□□□□□ -0.73
SNCA-201ENST00000336904 SEC31BQ9NQW1 1179 aa10.52□□□□□ -0.73
SNCA-201ENST00000336904 TJP1Q07157 1748 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 UBN2Q6ZU65 1347 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 IDH1O75874 414 aaKnown RBP10.51□□□□□ -0.73
SNCA-201ENST00000336904 SCRN1Q12765 414 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 BICDL1Q6ZP65 573 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 PTF1AQ7RTS3 328 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 NLRP10Q86W26 655 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 CKAP2LQ8IYA6 745 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 FBXW7Q969H0 707 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 IL17RAQ96F46 866 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 MBD3O95983 291 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 CYP19A1P11511 503 aaPredicted RBP10.51□□□□□ -0.73
SNCA-201ENST00000336904 LIG1P18858 919 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 TM6SF1Q9BZW5 370 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 TSPY26PQ9H489 355 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 USP25Q9UHP3 1055 aa10.51□□□□□ -0.73
SNCA-201ENST00000336904 KCNB2Q92953 911 aa10.5□□□□□ -0.73
SNCA-201ENST00000336904 MAP3K15Q6ZN16 1313 aa10.5□□□□□ -0.73
SNCA-201ENST00000336904 LAMB4A4D0S4 1761 aa10.5□□□□□ -0.73
SNCA-201ENST00000336904 APPP05067 770 aa10.5□□□□□ -0.73
SNCA-201ENST00000336904 MCAMP43121 646 aa10.5□□□□□ -0.73
SNCA-201ENST00000336904 ATP2B3Q16720 1220 aa10.5□□□□□ -0.73
SNCA-201ENST00000336904 CCDC144CPQ8IYA2 1237 aa10.5□□□□□ -0.73
SNCA-201ENST00000336904 TTLL11Q8NHH1 800 aa10.5□□□□□ -0.73
SNCA-201ENST00000336904 SH2B1Q9NRF2 756 aaPredicted RBP10.5□□□□□ -0.73
SNCA-201ENST00000336904 E7EWF7 191 aa10.5□□□□□ -0.73
SNCA-201ENST00000336904 PHKA1P46020 1223 aa10.5□□□□□ -0.73
SNCA-201ENST00000336904 CCDC173Q0VFZ6 552 aa10.5□□□□□ -0.73
SNCA-201ENST00000336904 CCDC158Q5M9N0 1113 aa10.5□□□□□ -0.73
SNCA-201ENST00000336904 GIGYF2Q6Y7W6 1299 aaKnown RBP10.5□□□□□ -0.73
SNCA-201ENST00000336904 ERCC4Q92889 916 aaPredicted RBP10.5□□□□□ -0.73
SNCA-201ENST00000336904 ZSCAN31Q96LW9 406 aaPredicted RBP10.5□□□□□ -0.73
SNCA-201ENST00000336904 ABCA3Q99758 1704 aa10.49□□□□□ -0.73
SNCA-201ENST00000336904 FOXP2O15409 715 aa10.49□□□□□ -0.73
SNCA-201ENST00000336904 RNF113AO15541 343 aaKnown RBP10.49□□□□□ -0.73
SNCA-201ENST00000336904 ATP6V1AP38606 617 aa10.49□□□□□ -0.73
SNCA-201ENST00000336904 ZBTB38Q8NAP3 1195 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms