RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 DDX11Q96FC9 970 aa23.52■■□□□ 1.36
CDCA4-201ENST00000336219 PGBD1Q96JS3 809 aa23.52■■□□□ 1.36
CDCA4-201ENST00000336219 DNAJC25Q9H1X3 360 aa23.52■■□□□ 1.36
CDCA4-201ENST00000336219 ANKRD7Q92527 254 aa23.52■■□□□ 1.35
CDCA4-201ENST00000336219 RFX7Q2KHR2 1363 aa23.51■■□□□ 1.35
CDCA4-201ENST00000336219 PIP4K2AP48426 406 aaPredicted RBP23.51■■□□□ 1.35
CDCA4-201ENST00000336219 KRT32Q14532 448 aa23.51■■□□□ 1.35
CDCA4-201ENST00000336219 COL18A1P39060 1754 aa23.51■■□□□ 1.35
CDCA4-201ENST00000336219 ZNF75DP51815 510 aa23.51■■□□□ 1.35
CDCA4-201ENST00000336219 UBE3BQ7Z3V4 1068 aa23.51■■□□□ 1.35
CDCA4-201ENST00000336219 ABCC6O95255 1503 aa23.5■■□□□ 1.35
CDCA4-201ENST00000336219 CTIFO43310 598 aaKnown RBP23.5■■□□□ 1.35
CDCA4-201ENST00000336219 CHGBP05060 677 aa23.5■■□□□ 1.35
CDCA4-201ENST00000336219 NAA30Q147X3 362 aaPredicted RBP23.5■■□□□ 1.35
CDCA4-201ENST00000336219 PROSER2Q86WR7 435 aaPredicted RBP23.5■■□□□ 1.35
CDCA4-201ENST00000336219 TTC5Q8N0Z6 440 aa23.5■■□□□ 1.35
CDCA4-201ENST00000336219 BICD2Q8TD16 824 aa23.5■■□□□ 1.35
CDCA4-201ENST00000336219 CLSTN2Q9H4D0 955 aa23.5■■□□□ 1.35
CDCA4-201ENST00000336219 ZNF609O15014 1411 aa23.49■■□□□ 1.35
CDCA4-201ENST00000336219 ZSCAN25Q6NSZ9 544 aa23.49■■□□□ 1.35
CDCA4-201ENST00000336219 PLA2G4DQ86XP0 818 aa23.49■■□□□ 1.35
CDCA4-201ENST00000336219 NDUFB9Q9Y6M9 179 aa23.49■■□□□ 1.35
CDCA4-201ENST00000336219 ADAMTSL3P82987 1691 aa23.49■■□□□ 1.35
CDCA4-201ENST00000336219 CCDC144BQ3MJ40 725 aa23.49■■□□□ 1.35
CDCA4-201ENST00000336219 CCDC144CPQ8IYA2 1237 aa23.49■■□□□ 1.35
CDCA4-201ENST00000336219 SCAND2PQ9GZW5 306 aaPredicted RBP23.49■■□□□ 1.35
CDCA4-201ENST00000336219 IGSF3O75054 1194 aa23.48■■□□□ 1.35
CDCA4-201ENST00000336219 DCAF5Q96JK2 942 aa23.48■■□□□ 1.35
CDCA4-201ENST00000336219 NEK1Q96PY6 1258 aa23.48■■□□□ 1.35
CDCA4-201ENST00000336219 CEBPZQ03701 1054 aaKnown RBP23.48■■□□□ 1.35
CDCA4-201ENST00000336219 NCBP1Q09161 790 aaKnown RBP23.48■■□□□ 1.35
CDCA4-201ENST00000336219 FMNL2Q96PY5 1086 aa23.48■■□□□ 1.35
CDCA4-201ENST00000336219 DBNDD2Q9BQY9 259 aa23.48■■□□□ 1.35
CDCA4-201ENST00000336219 ZNF165P49910 485 aa23.47■■□□□ 1.35
CDCA4-201ENST00000336219 FOSBP53539 338 aa23.47■■□□□ 1.35
CDCA4-201ENST00000336219 CACTINQ8WUQ7 758 aaKnown RBP23.47■■□□□ 1.35
CDCA4-201ENST00000336219 GTF3C6Q969F1 213 aa23.47■■□□□ 1.35
CDCA4-201ENST00000336219 C19orf44Q9H6X5 657 aa23.47■■□□□ 1.35
CDCA4-201ENST00000336219 CYP27B1O15528 508 aa23.47■■□□□ 1.35
CDCA4-201ENST00000336219 UTP14CQ5TAP6 766 aaKnown RBP23.47■■□□□ 1.35
CDCA4-201ENST00000336219 HAUS7Q99871 368 aa23.47■■□□□ 1.35
CDCA4-201ENST00000336219 DDX19AQ9NUU7 478 aaKnown RBP23.47■■□□□ 1.35
CDCA4-201ENST00000336219 U3KPZ7 1027 aaPredicted RBP23.47■■□□□ 1.35
CDCA4-201ENST00000336219 PKD1L3Q7Z443 1732 aa23.46■■□□□ 1.35
CDCA4-201ENST00000336219 LAMB4A4D0S4 1761 aa23.46■■□□□ 1.35
CDCA4-201ENST00000336219 A0A087WWV3 80 aa23.46■■□□□ 1.35
CDCA4-201ENST00000336219 A0A087WZG4 1122 aa23.46■■□□□ 1.35
CDCA4-201ENST00000336219 ATP5J2-PTCD1G3V325 749 aa23.46■■□□□ 1.35
CDCA4-201ENST00000336219 PTCD1O75127 700 aaKnown RBP23.46■■□□□ 1.35
CDCA4-201ENST00000336219 DNAJC2Q99543 621 aaKnown RBP23.46■■□□□ 1.35
CDCA4-201ENST00000336219 TNNT1P13805 278 aa23.46■■□□□ 1.35
CDCA4-201ENST00000336219 CASP7P55210 303 aa23.46■■□□□ 1.35
CDCA4-201ENST00000336219 ARID5BQ14865 1188 aa23.46■■□□□ 1.35
CDCA4-201ENST00000336219 CCDC129Q6ZRS4 1044 aa23.46■■□□□ 1.35
CDCA4-201ENST00000336219 TDRD7Q8NHU6 1098 aaKnown RBP23.46■■□□□ 1.35
CDCA4-201ENST00000336219 SEC62Q99442 399 aaKnown RBP23.46■■□□□ 1.35
CDCA4-201ENST00000336219 TRHP20396 242 aaPredicted RBP23.45■■□□□ 1.34
CDCA4-201ENST00000336219 MCMDC2Q4G0Z9 681 aa23.45■■□□□ 1.34
CDCA4-201ENST00000336219 RBM43Q6ZSC3 357 aaKnown RBP23.45■■□□□ 1.34
CDCA4-201ENST00000336219 BRF1Q92994 677 aa23.45■■□□□ 1.34
CDCA4-201ENST00000336219 CLIP2Q9UDT6 1046 aa23.45■■□□□ 1.34
CDCA4-201ENST00000336219 GLI3P10071 1580 aa23.45■■□□□ 1.34
CDCA4-201ENST00000336219 LRRC2Q9BYS8 371 aa23.44■■□□□ 1.34
CDCA4-201ENST00000336219 PLEKHG2Q9H7P9 1386 aa23.44■■□□□ 1.34
CDCA4-201ENST00000336219 LAMA4Q16363 1823 aa23.44■■□□□ 1.34
CDCA4-201ENST00000336219 CYP21A2P08686 494 aa23.44■■□□□ 1.34
CDCA4-201ENST00000336219 CSB-PGBD3P0DP91 1061 aa23.44■■□□□ 1.34
CDCA4-201ENST00000336219 Q6ZUG5 572 aa23.43■■□□□ 1.34
CDCA4-201ENST00000336219 FTOQ9C0B1 505 aaKnown RBP eCLIP23.43■■□□□ 1.344e-8■□□□□ 8.5
CDCA4-201ENST00000336219 RESTQ13127 1097 aa23.43■■□□□ 1.34
CDCA4-201ENST00000336219 DDX46Q7L014 1031 aaKnown RBP23.43■■□□□ 1.34
CDCA4-201ENST00000336219 PLBD2Q8NHP8 589 aa23.43■■□□□ 1.34
CDCA4-201ENST00000336219 PPFIA3O75145 1194 aa23.42■■□□□ 1.34
CDCA4-201ENST00000336219 C11orf57Q6ZUT1 292 aaPredicted RBP23.42■■□□□ 1.34
CDCA4-201ENST00000336219 TPD52L1Q16890 204 aaPredicted RBP23.41■■□□□ 1.34
CDCA4-201ENST00000336219 LMBR1LQ6UX01 489 aa23.41■■□□□ 1.34
CDCA4-201ENST00000336219 KBTBD3Q8NAB2 608 aa23.41■■□□□ 1.34
CDCA4-201ENST00000336219 ZNF592Q92610 1267 aa23.41■■□□□ 1.34
CDCA4-201ENST00000336219 SH3TC1Q8TE82 1336 aa23.41■■□□□ 1.34
CDCA4-201ENST00000336219 HSP90B1P14625 803 aaKnown RBP23.41■■□□□ 1.34
CDCA4-201ENST00000336219 DDX17Q92841 729 aaKnown RBP23.41■■□□□ 1.34
CDCA4-201ENST00000336219 USP27XA6NNY8 438 aa23.4■■□□□ 1.34
CDCA4-201ENST00000336219 SMTNL1A8MU46 457 aa23.4■■□□□ 1.34
CDCA4-201ENST00000336219 CABP4P57796 275 aa23.4■■□□□ 1.34
CDCA4-201ENST00000336219 H3BQV1 296 aa23.39■■□□□ 1.34
CDCA4-201ENST00000336219 FOXO4P98177 505 aa23.39■■□□□ 1.34
CDCA4-201ENST00000336219 IFFO2Q5TF58 517 aa23.39■■□□□ 1.34
CDCA4-201ENST00000336219 PALLDQ8WX93 1383 aa23.39■■□□□ 1.34
CDCA4-201ENST00000336219 PARP4Q9UKK3 1724 aaKnown RBP23.39■■□□□ 1.33
CDCA4-201ENST00000336219 STOX1Q6ZVD7 989 aa23.39■■□□□ 1.33
CDCA4-201ENST00000336219 MYH15Q9Y2K3 1946 aa23.38■■□□□ 1.33
CDCA4-201ENST00000336219 CHRNA2Q15822 529 aa23.38■■□□□ 1.33
CDCA4-201ENST00000336219 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.38■■□□□ 1.33
CDCA4-201ENST00000336219 CABLES1Q8TDN4 633 aa23.38■■□□□ 1.33
CDCA4-201ENST00000336219 H7C1W4 665 aa23.38■■□□□ 1.33
CDCA4-201ENST00000336219 SCRN1Q12765 414 aa23.38■■□□□ 1.33
CDCA4-201ENST00000336219 ERCC4Q92889 916 aaPredicted RBP23.38■■□□□ 1.33
CDCA4-201ENST00000336219 IQCB1Q15051 598 aa23.37■■□□□ 1.33
CDCA4-201ENST00000336219 ATG9AQ7Z3C6 839 aa23.37■■□□□ 1.33
CDCA4-201ENST00000336219 SMARCC2Q8TAQ2 1214 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms