RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 SBNO1A3KN83 1393 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 GOLGA8BA8MQT2 603 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 BRD1O95696 1058 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 RBM5P52756 815 aaKnown RBP eCLIP7.57□□□□□ -1.2
HMG20A-201ENST00000336216 LRMPQ12912 555 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 KRT32Q14532 448 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 SLC9C2Q5TAH2 1124 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 PYCARDQ9ULZ3 195 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 GIGYF1O75420 1035 aaPredicted RBP7.56□□□□□ -1.2
HMG20A-201ENST00000336216 DNAJC10Q8IXB1 793 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 DCAF5Q96JK2 942 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 GNL3LQ9NVN8 582 aaKnown RBP7.56□□□□□ -1.2
HMG20A-201ENST00000336216 CTNNA3Q9UI47 895 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 AKAP2Q9Y2D5 859 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 ZPR1O75312 459 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 DHX8Q14562 1220 aaKnown RBP7.56□□□□□ -1.2
HMG20A-201ENST00000336216 ATP2B3Q16720 1220 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 FAM182BQ5T319 152 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 TTLL7Q6ZT98 887 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 MIGA1Q8NAN2 632 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 PDLIM2Q96JY6 352 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.56□□□□□ -1.2
HMG20A-201ENST00000336216 CLIP2Q9UDT6 1046 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 IFIT3O14879 490 aaKnown RBP7.56□□□□□ -1.2
HMG20A-201ENST00000336216 ALDH1L1O75891 902 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 TRIM22Q8IYM9 498 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 SEC62Q99442 399 aaKnown RBP7.56□□□□□ -1.2
HMG20A-201ENST00000336216 NIP7Q9Y221 180 aaKnown RBP eCLIP7.56□□□□□ -1.2
HMG20A-201ENST00000336216 KNDC1Q76NI1 1749 aa7.56□□□□□ -1.2
HMG20A-201ENST00000336216 NAA30Q147X3 362 aaPredicted RBP7.55□□□□□ -1.2
HMG20A-201ENST00000336216 SKIDA1Q1XH10 827 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 ANO6Q4KMQ2 910 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 Q6ZUG5 572 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 ZSCAN29Q8IWY8 852 aaPredicted RBP7.55□□□□□ -1.2
HMG20A-201ENST00000336216 ZFP91Q96JP5 570 aaPredicted RBP7.55□□□□□ -1.2
HMG20A-201ENST00000336216 C8orf76Q96K31 380 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 DACT1Q9NYF0 836 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 ANKARQ7Z5J8 1434 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 F13A1P00488 732 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 DDB1Q16531 1140 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 EAF2Q96CJ1 260 aaPredicted RBP7.55□□□□□ -1.2
HMG20A-201ENST00000336216 ZNF396Q96N95 335 aaPredicted RBP7.55□□□□□ -1.2
HMG20A-201ENST00000336216 DNAJC25Q9H1X3 360 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 AXIN2Q9Y2T1 843 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 RTL1A6NKG5 1358 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 TAF5LO75529 589 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 TPM3P06753 285 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 ZNF165P49910 485 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 APOBRQ0VD83 1088 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 UVSSAQ2YD98 709 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 KLHL10Q6JEL2 608 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 PLCD3Q8N3E9 789 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 NCOA5Q9HCD5 579 aaKnown RBP7.55□□□□□ -1.2
HMG20A-201ENST00000336216 SLAIN2Q9P270 581 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 UBAP1LF5GYI3 381 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 POLR3GO15318 223 aaPredicted RBP7.55□□□□□ -1.2
HMG20A-201ENST00000336216 SERPINC1P01008 464 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 USP5P45974 858 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 MAP3K12Q12852 859 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 CREB3L3Q68CJ9 461 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 OTUD7BQ6GQQ9 843 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 TRMT1LQ7Z2T5 733 aaKnown RBP7.55□□□□□ -1.2
HMG20A-201ENST00000336216 DZIP3Q86Y13 1208 aaKnown RBP7.55□□□□□ -1.2
HMG20A-201ENST00000336216 NOC3LQ8WTT2 800 aaKnown RBP7.55□□□□□ -1.2
HMG20A-201ENST00000336216 ZKSCAN3Q9BRR0 538 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 TMX1Q9H3N1 280 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 ORC3Q9UBD5 711 aaPredicted RBP7.55□□□□□ -1.2
HMG20A-201ENST00000336216 CFAP45Q9UL16 551 aa7.55□□□□□ -1.2
HMG20A-201ENST00000336216 ABCC4O15439 1325 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 KLF18A0A0U1RQI7 1052 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 PTPN14Q15678 1187 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 SLC52A2Q9HAB3 445 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 XBP1P17861 261 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 CPSF1Q10570 1443 aaKnown RBP7.54□□□□□ -1.2
HMG20A-201ENST00000336216 GCKRQ14397 625 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 CDC42BPGQ6DT37 1551 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 PTPRUQ92729 1446 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 VAT1LQ9HCJ6 419 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 PAG1Q9NWQ8 432 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 NRBP1Q9UHY1 535 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 AATKQ6ZMQ8 1374 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 A0A1B0GUL7 405 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 C6orf229H3BNL8 230 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 IRS4O14654 1257 aaPredicted RBP7.54□□□□□ -1.2
HMG20A-201ENST00000336216 MCMDC2Q4G0Z9 681 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 CAVIN4Q5BKX8 364 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 ZSCAN25Q6NSZ9 544 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 OLFM4Q6UX06 510 aa7.54□□□□□ -1.2
HMG20A-201ENST00000336216 SH2B1Q9NRF2 756 aaPredicted RBP7.54□□□□□ -1.2
HMG20A-201ENST00000336216 F8W031 263 aaPredicted RBP7.53□□□□□ -1.2
HMG20A-201ENST00000336216 MARCKSP29966 332 aaPredicted RBP7.53□□□□□ -1.2
HMG20A-201ENST00000336216 TYRO3Q06418 890 aa7.53□□□□□ -1.2
HMG20A-201ENST00000336216 TSR1Q2NL82 804 aaKnown RBP7.53□□□□□ -1.2
HMG20A-201ENST00000336216 MNS1Q8NEH6 495 aa7.53□□□□□ -1.2
HMG20A-201ENST00000336216 ZHX3Q9H4I2 956 aa7.53□□□□□ -1.2
HMG20A-201ENST00000336216 TLR7Q9NYK1 1049 aaKnown RBP7.53□□□□□ -1.2
HMG20A-201ENST00000336216 IBTKQ9P2D0 1353 aaPredicted RBP7.53□□□□□ -1.2
HMG20A-201ENST00000336216 ADAMTSL3P82987 1691 aa7.53□□□□□ -1.2
HMG20A-201ENST00000336216 PTH1RQ03431 593 aa7.53□□□□□ -1.2
HMG20A-201ENST00000336216 DMTNQ08495 405 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms