RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 A0A1B0GUL7 405 aa28.47■■■□□ 2.15
TSEN54-201ENST00000333213 METTL24Q5JXM2 366 aa28.47■■■□□ 2.15
TSEN54-201ENST00000333213 CELF1Q92879 486 aaKnown RBP28.47■■■□□ 2.15
TSEN54-201ENST00000333213 SPEF2Q9C093 1822 aa28.47■■■□□ 2.15
TSEN54-201ENST00000333213 MPHOSPH8Q99549 860 aa28.46■■■□□ 2.15
TSEN54-201ENST00000333213 MMP10P09238 476 aa28.45■■■□□ 2.14
TSEN54-201ENST00000333213 IGHMBP2P38935 993 aaKnown RBP28.45■■■□□ 2.14
TSEN54-201ENST00000333213 NEUROD6Q96NK8 337 aa28.45■■■□□ 2.14
TSEN54-201ENST00000333213 CDC5LQ99459 802 aaKnown RBP28.45■■■□□ 2.14
TSEN54-201ENST00000333213 NRXN2Q9P2S2 1712 aa28.44■■■□□ 2.14
TSEN54-201ENST00000333213 GLRX3O76003 335 aaKnown RBP28.44■■■□□ 2.14
TSEN54-201ENST00000333213 PDE8BO95263 885 aa28.44■■■□□ 2.14
TSEN54-201ENST00000333213 MAP4K4O95819 1239 aaPredicted RBP28.44■■■□□ 2.14
TSEN54-201ENST00000333213 TBC1D9Q6ZT07 1266 aa28.44■■■□□ 2.14
TSEN54-201ENST00000333213 HELBQ8NG08 1087 aaPredicted RBP28.44■■■□□ 2.14
TSEN54-201ENST00000333213 ST5P78524 1137 aa28.43■■■□□ 2.14
TSEN54-201ENST00000333213 GPATCH3Q96I76 525 aa28.43■■■□□ 2.14
TSEN54-201ENST00000333213 MROH5Q6ZUA9 1318 aa28.43■■■□□ 2.14
TSEN54-201ENST00000333213 ANKRD18AQ8IVF6 992 aa28.42■■■□□ 2.14
TSEN54-201ENST00000333213 TRIM6-TRIM34B2RNG4 842 aa28.41■■■□□ 2.14
TSEN54-201ENST00000333213 ERC2O15083 957 aa28.41■■■□□ 2.14
TSEN54-201ENST00000333213 ADORA1P30542 326 aa28.41■■■□□ 2.14
TSEN54-201ENST00000333213 CRY2Q49AN0 593 aa28.41■■■□□ 2.14
TSEN54-201ENST00000333213 AKAP2Q9Y2D5 859 aa28.41■■■□□ 2.14
TSEN54-201ENST00000333213 SNAP23O00161 211 aa28.41■■■□□ 2.14
TSEN54-201ENST00000333213 CDC45O75419 566 aa28.41■■■□□ 2.14
TSEN54-201ENST00000333213 TAF5LO75529 589 aa28.41■■■□□ 2.14
TSEN54-201ENST00000333213 RILPL2Q969X0 211 aa28.4■■■□□ 2.14
TSEN54-201ENST00000333213 BOLA2Q9H3K6 86 aa28.4■■■□□ 2.14
TSEN54-201ENST00000333213 BSDC1Q9NW68 430 aaPredicted RBP28.4■■■□□ 2.14
TSEN54-201ENST00000333213 RPS8P62241 208 aaKnown RBP28.39■■■□□ 2.14
TSEN54-201ENST00000333213 XAGE2Q96GT9 111 aa28.39■■■□□ 2.14
TSEN54-201ENST00000333213 ATP5JP18859 108 aa28.39■■■□□ 2.13
TSEN54-201ENST00000333213 FGFR2P21802 821 aa28.39■■■□□ 2.13
TSEN54-201ENST00000333213 CHRNDQ07001 517 aa28.39■■■□□ 2.13
TSEN54-201ENST00000333213 ATP2B3Q16720 1220 aa28.39■■■□□ 2.13
TSEN54-201ENST00000333213 ANKRD31Q8N7Z5 1873 aa28.38■■■□□ 2.13
TSEN54-201ENST00000333213 KLRG2A4D1S0 409 aaPredicted RBP28.38■■■□□ 2.13
TSEN54-201ENST00000333213 DDX46Q7L014 1031 aaKnown RBP28.38■■■□□ 2.13
TSEN54-201ENST00000333213 UPF1Q92900 1129 aaKnown RBP eCLIP28.37■■■□□ 2.13
TSEN54-201ENST00000333213 PARP3Q9Y6F1 533 aa28.37■■■□□ 2.13
TSEN54-201ENST00000333213 SLC51AQ86UW1 340 aa28.37■■■□□ 2.13
TSEN54-201ENST00000333213 MINPP1Q9UNW1 487 aa28.37■■■□□ 2.13
TSEN54-201ENST00000333213 NDUFB9Q9Y6M9 179 aa28.36■■■□□ 2.13
TSEN54-201ENST00000333213 WTIPA6NIX2 430 aaPredicted RBP28.35■■■□□ 2.13
TSEN54-201ENST00000333213 A0A1B0GUL6 1792 aa28.35■■■□□ 2.13
TSEN54-201ENST00000333213 PUM3Q15397 648 aaKnown RBP28.35■■■□□ 2.13
TSEN54-201ENST00000333213 EDC3Q96F86 508 aaKnown RBP28.34■■■□□ 2.13
TSEN54-201ENST00000333213 BRIP1Q9BX63 1249 aa28.34■■■□□ 2.13
TSEN54-201ENST00000333213 GRAPQ13588 217 aa28.33■■■□□ 2.13
TSEN54-201ENST00000333213 GRAPLQ8TC17 118 aaPredicted RBP28.33■■■□□ 2.13
TSEN54-201ENST00000333213 CNTROBQ8N137 903 aa28.33■■■□□ 2.13
TSEN54-201ENST00000333213 LPIN2Q92539 896 aa28.33■■■□□ 2.13
TSEN54-201ENST00000333213 RPGRQ92834 1020 aaKnown RBP28.32■■■□□ 2.12
TSEN54-201ENST00000333213 GOLGB1Q14789 3259 aaKnown RBP28.32■■■□□ 2.12
TSEN54-201ENST00000333213 CHMLP26374 656 aa28.31■■■□□ 2.12
TSEN54-201ENST00000333213 MFAP1P55081 439 aaKnown RBP28.31■■■□□ 2.12
TSEN54-201ENST00000333213 HAUS7Q99871 368 aa28.31■■■□□ 2.12
TSEN54-201ENST00000333213 AK9Q5TCS8 1911 aa28.31■■■□□ 2.12
TSEN54-201ENST00000333213 HOXA10P31260 410 aaPredicted RBP28.31■■■□□ 2.12
TSEN54-201ENST00000333213 EVI5LQ96CN4 794 aa28.3■■■□□ 2.12
TSEN54-201ENST00000333213 ARAP2Q8WZ64 1704 aa28.3■■■□□ 2.12
TSEN54-201ENST00000333213 SCARF1Q14162 830 aa28.3■■■□□ 2.12
TSEN54-201ENST00000333213 CCDC158Q5M9N0 1113 aa28.29■■■□□ 2.12
TSEN54-201ENST00000333213 DEKP35659 375 aaKnown RBP28.28■■■□□ 2.12
TSEN54-201ENST00000333213 GORABQ5T7V8 394 aa28.28■■■□□ 2.12
TSEN54-201ENST00000333213 DNAJC2Q99543 621 aaKnown RBP28.28■■■□□ 2.12
TSEN54-201ENST00000333213 IL25Q9H293 177 aa28.28■■■□□ 2.12
TSEN54-201ENST00000333213 SRGNP10124 158 aa28.28■■■□□ 2.12
TSEN54-201ENST00000333213 RBM17Q96I25 401 aaKnown RBP28.28■■■□□ 2.12
TSEN54-201ENST00000333213 IFIT1P09914 478 aaKnown RBP28.27■■■□□ 2.12
TSEN54-201ENST00000333213 SLC5A1P13866 664 aa28.27■■■□□ 2.12
TSEN54-201ENST00000333213 PHKA1P46020 1223 aa28.27■■■□□ 2.12
TSEN54-201ENST00000333213 TTC39AQ5SRH9 613 aa28.27■■■□□ 2.12
TSEN54-201ENST00000333213 CCDC102BQ68D86 513 aa28.27■■■□□ 2.12
TSEN54-201ENST00000333213 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.27■■■□□ 2.12
TSEN54-201ENST00000333213 COL11A2P13942 1736 aaPredicted RBP28.26■■■□□ 2.11
TSEN54-201ENST00000333213 SLC16A10Q8TF71 515 aa28.26■■■□□ 2.11
TSEN54-201ENST00000333213 CRAMP1Q96RY5 1269 aa28.26■■■□□ 2.11
TSEN54-201ENST00000333213 PI16Q6UXB8 463 aa28.25■■■□□ 2.11
TSEN54-201ENST00000333213 PDE6BP35913 854 aa28.24■■■□□ 2.11
TSEN54-201ENST00000333213 MCAMP43121 646 aa28.24■■■□□ 2.11
TSEN54-201ENST00000333213 UBE4AQ14139 1066 aa28.24■■■□□ 2.11
TSEN54-201ENST00000333213 CASC1Q6TDU7 716 aa28.24■■■□□ 2.11
TSEN54-201ENST00000333213 ESYT1Q9BSJ8 1104 aa28.24■■■□□ 2.11
TSEN54-201ENST00000333213 ZNF512BQ96KM6 892 aaPredicted RBP28.24■■■□□ 2.11
TSEN54-201ENST00000333213 ANTXR1Q9H6X2 564 aa28.24■■■□□ 2.11
TSEN54-201ENST00000333213 SNRKQ9NRH2 765 aa28.24■■■□□ 2.11
TSEN54-201ENST00000333213 DDRGK1Q96HY6 314 aa28.23■■■□□ 2.11
TSEN54-201ENST00000333213 AKAP11Q9UKA4 1901 aa28.23■■■□□ 2.11
TSEN54-201ENST00000333213 GOLIM4O00461 696 aa28.22■■■□□ 2.11
TSEN54-201ENST00000333213 KLRK1P26718 216 aa28.22■■■□□ 2.11
TSEN54-201ENST00000333213 ARID4AP29374 1257 aaPredicted RBP28.22■■■□□ 2.11
TSEN54-201ENST00000333213 BCAMP50895 628 aa28.22■■■□□ 2.11
TSEN54-201ENST00000333213 TBC1D32Q96NH3 1257 aa28.22■■■□□ 2.11
TSEN54-201ENST00000333213 ANKRD2Q9GZV1 360 aa28.22■■■□□ 2.11
TSEN54-201ENST00000333213 PAG1Q9NWQ8 432 aa28.22■■■□□ 2.11
TSEN54-201ENST00000333213 CHGBP05060 677 aa28.22■■■□□ 2.11
TSEN54-201ENST00000333213 FSD1Q9BTV5 496 aa28.22■■■□□ 2.11
TSEN54-201ENST00000333213 BBOX1O75936 387 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms