RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
SRPRA-201ENST00000332118 PDE8AO60658 829 aa16.38■□□□□ 0.21
SRPRA-201ENST00000332118 CASTP20810 708 aaKnown RBP16.38■□□□□ 0.21
SRPRA-201ENST00000332118 SMARCC1Q92922 1105 aaPredicted RBP16.38■□□□□ 0.21
SRPRA-201ENST00000332118 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.37■□□□□ 0.21
SRPRA-201ENST00000332118 CAMTA2O94983 1202 aa16.37■□□□□ 0.21
SRPRA-201ENST00000332118 ST3GAL1Q11201 340 aa16.37■□□□□ 0.21
SRPRA-201ENST00000332118 ANKRD1Q15327 319 aa16.37■□□□□ 0.21
SRPRA-201ENST00000332118 PUS3Q9BZE2 481 aaKnown RBP16.37■□□□□ 0.21
SRPRA-201ENST00000332118 PDRG1Q9NUG6 133 aa16.37■□□□□ 0.21
SRPRA-201ENST00000332118 ZBTB22O15209 634 aa16.37■□□□□ 0.21
SRPRA-201ENST00000332118 RPS6KB1P23443 525 aa16.37■□□□□ 0.21
SRPRA-201ENST00000332118 IFIT5Q13325 482 aaKnown RBP16.37■□□□□ 0.21
SRPRA-201ENST00000332118 DZIP3Q86Y13 1208 aaKnown RBP16.37■□□□□ 0.21
SRPRA-201ENST00000332118 FAM89AQ96GI7 184 aa16.36■□□□□ 0.21
SRPRA-201ENST00000332118 ZNF594Q96JF6 807 aaPredicted RBP16.36■□□□□ 0.21
SRPRA-201ENST00000332118 AGXT2Q9BYV1 514 aa16.36■□□□□ 0.21
SRPRA-201ENST00000332118 CEP126Q9P2H0 1117 aa16.36■□□□□ 0.21
SRPRA-201ENST00000332118 TIAM2Q8IVF5 1701 aa16.36■□□□□ 0.21
SRPRA-201ENST00000332118 WDR33Q9C0J8 1336 aaKnown RBP16.36■□□□□ 0.21
SRPRA-201ENST00000332118 LOC102724428A0A0B4J2F2 783 aa16.36■□□□□ 0.21
SRPRA-201ENST00000332118 SIK1P57059 783 aa16.36■□□□□ 0.21
SRPRA-201ENST00000332118 PARP10Q53GL7 1025 aa16.36■□□□□ 0.21
SRPRA-201ENST00000332118 JAKMIP1Q96N16 626 aaKnown RBP16.36■□□□□ 0.21
SRPRA-201ENST00000332118 CNTNAP4Q9C0A0 1308 aa16.35■□□□□ 0.21
SRPRA-201ENST00000332118 EDC3Q96F86 508 aaKnown RBP16.35■□□□□ 0.21
SRPRA-201ENST00000332118 SPATA31A6Q5VVP1 1343 aa16.35■□□□□ 0.21
SRPRA-201ENST00000332118 ZFYP08048 801 aaPredicted RBP16.35■□□□□ 0.21
SRPRA-201ENST00000332118 FGFR2P21802 821 aa16.35■□□□□ 0.21
SRPRA-201ENST00000332118 CRKLP46109 303 aaKnown RBP16.35■□□□□ 0.21
SRPRA-201ENST00000332118 MYH15Q9Y2K3 1946 aa16.35■□□□□ 0.21
SRPRA-201ENST00000332118 ZNF445P59923 1031 aa16.34■□□□□ 0.21
SRPRA-201ENST00000332118 C4AP0C0L4 1744 aa16.34■□□□□ 0.21
SRPRA-201ENST00000332118 C4BP0C0L5 1744 aa16.34■□□□□ 0.21
SRPRA-201ENST00000332118 TIMM10P62072 90 aa16.34■□□□□ 0.21
SRPRA-201ENST00000332118 ITPK1Q13572 414 aa16.34■□□□□ 0.21
SRPRA-201ENST00000332118 IRS4O14654 1257 aaPredicted RBP16.34■□□□□ 0.21
SRPRA-201ENST00000332118 RNF113AO15541 343 aaKnown RBP16.34■□□□□ 0.21
SRPRA-201ENST00000332118 ITGA6P23229 1130 aa16.34■□□□□ 0.21
SRPRA-201ENST00000332118 ARID4AP29374 1257 aaPredicted RBP16.34■□□□□ 0.21
SRPRA-201ENST00000332118 TOB2Q14106 344 aaPredicted RBP16.34■□□□□ 0.21
SRPRA-201ENST00000332118 CLEC4GQ6UXB4 293 aa16.34■□□□□ 0.21
SRPRA-201ENST00000332118 XAGE2Q96GT9 111 aa16.34■□□□□ 0.21
SRPRA-201ENST00000332118 GREM2Q9H772 168 aa16.34■□□□□ 0.21
SRPRA-201ENST00000332118 MROH5Q6ZUA9 1318 aa16.33■□□□□ 0.21
SRPRA-201ENST00000332118 LRRFIP1Q32MZ4 808 aaKnown RBP16.33■□□□□ 0.21
SRPRA-201ENST00000332118 KIAA1551Q9HCM1 1747 aa16.33■□□□□ 0.2
SRPRA-201ENST00000332118 ANKRD18BA2A2Z9 1011 aa16.33■□□□□ 0.2
SRPRA-201ENST00000332118 LARGE1O95461 756 aa16.32■□□□□ 0.2
SRPRA-201ENST00000332118 IFIT1P09914 478 aaKnown RBP16.32■□□□□ 0.2
SRPRA-201ENST00000332118 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
SRPRA-201ENST00000332118 NTSR2O95665 410 aa16.32■□□□□ 0.2
SRPRA-201ENST00000332118 HMGB1P09429 215 aaKnown RBP16.32■□□□□ 0.2
SRPRA-201ENST00000332118 GOLGA6L3A6NEY3 463 aa16.32■□□□□ 0.2
SRPRA-201ENST00000332118 ADAMTS2O95450 1211 aa16.32■□□□□ 0.2
SRPRA-201ENST00000332118 MRE11P49959 708 aa16.32■□□□□ 0.2
SRPRA-201ENST00000332118 ME3Q16798 604 aa16.32■□□□□ 0.2
SRPRA-201ENST00000332118 CCDC158Q5M9N0 1113 aa16.32■□□□□ 0.2
SRPRA-201ENST00000332118 TPCN1Q9ULQ1 816 aa16.32■□□□□ 0.2
SRPRA-201ENST00000332118 MAST3O60307 1309 aa16.31■□□□□ 0.2
SRPRA-201ENST00000332118 COL4A1P02462 1669 aa16.31■□□□□ 0.2
SRPRA-201ENST00000332118 HSP90B1P14625 803 aaKnown RBP16.31■□□□□ 0.2
SRPRA-201ENST00000332118 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
SRPRA-201ENST00000332118 MYO5AQ9Y4I1 1855 aaKnown RBP16.31■□□□□ 0.2
SRPRA-201ENST00000332118 PDE8BO95263 885 aa16.31■□□□□ 0.2
SRPRA-201ENST00000332118 CYP21A2P08686 494 aa16.31■□□□□ 0.2
SRPRA-201ENST00000332118 RC3H1Q5TC82 1133 aaKnown RBP16.31■□□□□ 0.2
SRPRA-201ENST00000332118 BLOC1S2Q6QNY1 142 aa16.31■□□□□ 0.2
SRPRA-201ENST00000332118 DNAJC2Q99543 621 aaKnown RBP16.31■□□□□ 0.2
SRPRA-201ENST00000332118 TAF6LQ9Y6J9 622 aa16.31■□□□□ 0.2
SRPRA-201ENST00000332118 FOXP2O15409 715 aa16.3■□□□□ 0.2
SRPRA-201ENST00000332118 EVCP57679 992 aa16.3■□□□□ 0.2
SRPRA-201ENST00000332118 ZMYM6O95789 1325 aa16.3■□□□□ 0.2
SRPRA-201ENST00000332118 GOLIM4O00461 696 aa16.3■□□□□ 0.2
SRPRA-201ENST00000332118 ZSCAN22P10073 491 aaPredicted RBP16.3■□□□□ 0.2
SRPRA-201ENST00000332118 ATP6V1AP38606 617 aa16.3■□□□□ 0.2
SRPRA-201ENST00000332118 MCTP1Q6DN14 999 aa16.3■□□□□ 0.2
SRPRA-201ENST00000332118 WDR19Q8NEZ3 1342 aa16.3■□□□□ 0.2
SRPRA-201ENST00000332118 SUSD4Q5VX71 490 aa16.3■□□□□ 0.2
SRPRA-201ENST00000332118 GPT2Q8TD30 523 aa16.3■□□□□ 0.2
SRPRA-201ENST00000332118 TRMT112Q9UI30 125 aaKnown RBP16.3■□□□□ 0.2
SRPRA-201ENST00000332118 ADORA1P30542 326 aa16.29■□□□□ 0.2
SRPRA-201ENST00000332118 EXOSC10Q01780 885 aaKnown RBP16.29■□□□□ 0.2
SRPRA-201ENST00000332118 SYNE4Q8N205 404 aa16.29■□□□□ 0.2
SRPRA-201ENST00000332118 RGS22Q8NE09 1264 aa16.29■□□□□ 0.2
SRPRA-201ENST00000332118 NEUROD6Q96NK8 337 aa16.29■□□□□ 0.2
SRPRA-201ENST00000332118 GZF1Q9H116 711 aaPredicted RBP16.29■□□□□ 0.2
SRPRA-201ENST00000332118 MBD3O95983 291 aa16.29■□□□□ 0.2
SRPRA-201ENST00000332118 HSPD1P10809 573 aaKnown RBP16.29■□□□□ 0.2
SRPRA-201ENST00000332118 ATP2B3Q16720 1220 aa16.29■□□□□ 0.2
SRPRA-201ENST00000332118 NEK1Q96PY6 1258 aa16.29■□□□□ 0.2
SRPRA-201ENST00000332118 STX6O43752 255 aa16.28■□□□□ 0.2
SRPRA-201ENST00000332118 XRCC6P12956 609 aaKnown RBP eCLIP16.28■□□□□ 0.2
SRPRA-201ENST00000332118 CPA1P15085 419 aa16.28■□□□□ 0.2
SRPRA-201ENST00000332118 SYT1P21579 422 aa16.28■□□□□ 0.2
SRPRA-201ENST00000332118 COL9A3Q14050 684 aaPredicted RBP16.28■□□□□ 0.2
SRPRA-201ENST00000332118 SEC62Q99442 399 aaKnown RBP16.28■□□□□ 0.2
SRPRA-201ENST00000332118 UTP14AQ9BVJ6 771 aaKnown RBP16.28■□□□□ 0.2
SRPRA-201ENST00000332118 MAST2Q6P0Q8 1798 aa16.28■□□□□ 0.2
SRPRA-201ENST00000332118 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms