RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 EIF4A1P60842 406 aaKnown RBP21.27■■□□□ 1
CLSTN3-202ENST00000331148 CCZ1BP86790 482 aa21.27■■□□□ 1
CLSTN3-202ENST00000331148 CCZ1P86791 482 aaPredicted RBP21.27■■□□□ 1
CLSTN3-202ENST00000331148 LARP1Q6PKG0 1096 aaKnown RBP21.27■■□□□ 1
CLSTN3-202ENST00000331148 CALCOCO1Q9P1Z2 691 aa21.27■■□□□ 1
CLSTN3-202ENST00000331148 CREB3L3Q68CJ9 461 aa21.27■■□□□ 1
CLSTN3-202ENST00000331148 KDM3BQ7LBC6 1761 aa21.26■□□□□ 0.99
CLSTN3-202ENST00000331148 CCDC69A6NI79 296 aa21.26■□□□□ 0.99
CLSTN3-202ENST00000331148 VGLL3A8MV65 326 aa21.26■□□□□ 0.99
CLSTN3-202ENST00000331148 CCAR2Q8N163 923 aaKnown RBP21.26■□□□□ 0.99
CLSTN3-202ENST00000331148 RBM8AQ9Y5S9 174 aaKnown RBP21.26■□□□□ 0.99
CLSTN3-202ENST00000331148 ADAMTS7Q9UKP4 1686 aa21.26■□□□□ 0.99
CLSTN3-202ENST00000331148 PDE4CQ08493 712 aa21.26■□□□□ 0.99
CLSTN3-202ENST00000331148 RNF20Q5VTR2 975 aa21.26■□□□□ 0.99
CLSTN3-202ENST00000331148 C11orf57Q6ZUT1 292 aaPredicted RBP21.26■□□□□ 0.99
CLSTN3-202ENST00000331148 CARD10Q9BWT7 1032 aa21.26■□□□□ 0.99
CLSTN3-202ENST00000331148 STRN4Q9NRL3 753 aa21.26■□□□□ 0.99
CLSTN3-202ENST00000331148 TRMT1Q9NXH9 659 aaKnown RBP21.26■□□□□ 0.99
CLSTN3-202ENST00000331148 COL9A3Q14050 684 aaPredicted RBP21.25■□□□□ 0.99
CLSTN3-202ENST00000331148 KCNQ3O43525 872 aa21.25■□□□□ 0.99
CLSTN3-202ENST00000331148 KCND1Q9NSA2 647 aa21.25■□□□□ 0.99
CLSTN3-202ENST00000331148 NAP1L2Q9ULW6 460 aaPredicted RBP21.25■□□□□ 0.99
CLSTN3-202ENST00000331148 HSP90AB4PQ58FF6 505 aa21.24■□□□□ 0.99
CLSTN3-202ENST00000331148 USP16Q9Y5T5 823 aa21.24■□□□□ 0.99
CLSTN3-202ENST00000331148 HOXB7P09629 217 aa21.24■□□□□ 0.99
CLSTN3-202ENST00000331148 PSMA5P28066 241 aa21.24■□□□□ 0.99
CLSTN3-202ENST00000331148 CHMP4AQ9BY43 222 aa21.24■□□□□ 0.99
CLSTN3-202ENST00000331148 PKD1L3Q7Z443 1732 aa21.23■□□□□ 0.99
CLSTN3-202ENST00000331148 CYP27B1O15528 508 aa21.23■□□□□ 0.99
CLSTN3-202ENST00000331148 H2AFXP16104 143 aaPredicted RBP21.23■□□□□ 0.99
CLSTN3-202ENST00000331148 SLC20A2Q08357 652 aa21.23■□□□□ 0.99
CLSTN3-202ENST00000331148 KIF2AO00139 706 aaPredicted RBP21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 TULP2O00295 520 aa21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 GIGYF1O75420 1035 aaPredicted RBP21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 ANKRD1Q15327 319 aa21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 STX1AQ16623 288 aa21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 HDGFL1Q5TGJ6 251 aa21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 FILIP1Q7Z7B0 1213 aa21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 NOL10Q9BSC4 688 aaKnown RBP21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 SCN11AQ9UI33 1791 aa21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 SLC27A2O14975 620 aa21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 BMS1Q14692 1282 aaKnown RBP21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 DCAF5Q96JK2 942 aa21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 KDM6AO15550 1401 aaPredicted RBP21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 CACNA1FO60840 1977 aa21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 SIPA1L3O60292 1781 aaPredicted RBP21.22■□□□□ 0.99
CLSTN3-202ENST00000331148 ADCY9O60503 1353 aa21.21■□□□□ 0.99
CLSTN3-202ENST00000331148 CYP2C19P33261 490 aa21.21■□□□□ 0.99
CLSTN3-202ENST00000331148 MAP4K1Q92918 833 aa21.21■□□□□ 0.99
CLSTN3-202ENST00000331148 TCEANC2Q96MN5 208 aa21.21■□□□□ 0.99
CLSTN3-202ENST00000331148 PHAXQ9H814 394 aaKnown RBP21.21■□□□□ 0.99
CLSTN3-202ENST00000331148 SLC52A2Q9HAB3 445 aa21.21■□□□□ 0.99
CLSTN3-202ENST00000331148 ECHDC1Q9NTX5 307 aa21.21■□□□□ 0.99
CLSTN3-202ENST00000331148 COL22A1Q8NFW1 1626 aaPredicted RBP21.21■□□□□ 0.99
CLSTN3-202ENST00000331148 NBPF7P0C2Y1 421 aaPredicted RBP21.21■□□□□ 0.99
CLSTN3-202ENST00000331148 RESTQ13127 1097 aa21.21■□□□□ 0.99
CLSTN3-202ENST00000331148 OS9Q13438 667 aaPredicted RBP21.21■□□□□ 0.99
CLSTN3-202ENST00000331148 BTG4Q9NY30 223 aa21.21■□□□□ 0.99
CLSTN3-202ENST00000331148 PARP4Q9UKK3 1724 aaKnown RBP21.2■□□□□ 0.99
CLSTN3-202ENST00000331148 IL2RBP14784 551 aa21.2■□□□□ 0.98
CLSTN3-202ENST00000331148 TOB2Q14106 344 aaPredicted RBP21.2■□□□□ 0.98
CLSTN3-202ENST00000331148 BLOC1S2Q6QNY1 142 aa21.2■□□□□ 0.98
CLSTN3-202ENST00000331148 ZCRB1Q8TBF4 217 aaKnown RBP21.2■□□□□ 0.98
CLSTN3-202ENST00000331148 L2HGDHQ9H9P8 463 aa21.2■□□□□ 0.98
CLSTN3-202ENST00000331148 NPHP1O15259 732 aa21.2■□□□□ 0.98
CLSTN3-202ENST00000331148 RPS6KB1P23443 525 aa21.2■□□□□ 0.98
CLSTN3-202ENST00000331148 IPO4Q8TEX9 1081 aaKnown RBP21.2■□□□□ 0.98
CLSTN3-202ENST00000331148 EVI5LQ96CN4 794 aa21.2■□□□□ 0.98
CLSTN3-202ENST00000331148 DNAJC2Q99543 621 aaKnown RBP21.2■□□□□ 0.98
CLSTN3-202ENST00000331148 FHOD1Q9Y613 1164 aa21.2■□□□□ 0.98
CLSTN3-202ENST00000331148 EIF2S2P20042 333 aaKnown RBP21.19■□□□□ 0.98
CLSTN3-202ENST00000331148 DHX40Q8IX18 779 aaKnown RBP21.19■□□□□ 0.98
CLSTN3-202ENST00000331148 CLASRPQ8N2M8 674 aaKnown RBP21.19■□□□□ 0.98
CLSTN3-202ENST00000331148 NFATC2IPQ8NCF5 419 aa21.19■□□□□ 0.98
CLSTN3-202ENST00000331148 ALDH8A1Q9H2A2 487 aaPredicted RBP21.19■□□□□ 0.98
CLSTN3-202ENST00000331148 BECN2A8MW95 431 aa21.18■□□□□ 0.98
CLSTN3-202ENST00000331148 CAPN2P17655 700 aa21.18■□□□□ 0.98
CLSTN3-202ENST00000331148 PIP4K2BP78356 416 aa21.18■□□□□ 0.98
CLSTN3-202ENST00000331148 STK3Q13188 491 aa21.18■□□□□ 0.98
CLSTN3-202ENST00000331148 ERCC6LQ2NKX8 1250 aa21.18■□□□□ 0.98
CLSTN3-202ENST00000331148 FBXO41Q8TF61 875 aa21.18■□□□□ 0.98
CLSTN3-202ENST00000331148 GPATCH3Q96I76 525 aa21.18■□□□□ 0.98
CLSTN3-202ENST00000331148 FAM227BQ96M60 508 aa21.18■□□□□ 0.98
CLSTN3-202ENST00000331148 PHLPP1O60346 1717 aa21.18■□□□□ 0.98
CLSTN3-202ENST00000331148 CTAGE5O15320 804 aa21.18■□□□□ 0.98
CLSTN3-202ENST00000331148 SNW1Q13573 536 aaKnown RBP21.18■□□□□ 0.98
CLSTN3-202ENST00000331148 GTF3C6Q969F1 213 aa21.18■□□□□ 0.98
CLSTN3-202ENST00000331148 GSDMDP57764 484 aa21.17■□□□□ 0.98
CLSTN3-202ENST00000331148 NMIQ13287 307 aaPredicted RBP21.17■□□□□ 0.98
CLSTN3-202ENST00000331148 PCDH11XQ9BZA7 1347 aa21.17■□□□□ 0.98
CLSTN3-202ENST00000331148 PCDH11YQ9BZA8 1340 aa21.17■□□□□ 0.98
CLSTN3-202ENST00000331148 COL14A1Q05707 1796 aaKnown RBP21.17■□□□□ 0.98
CLSTN3-202ENST00000331148 CLCN6P51797 869 aa21.17■□□□□ 0.98
CLSTN3-202ENST00000331148 LRRN4CLQ8ND94 238 aa21.17■□□□□ 0.98
CLSTN3-202ENST00000331148 HEG1Q9ULI3 1381 aa21.17■□□□□ 0.98
CLSTN3-202ENST00000331148 JAK2O60674 1132 aa21.16■□□□□ 0.98
CLSTN3-202ENST00000331148 TAF6LQ9Y6J9 622 aa21.16■□□□□ 0.98
CLSTN3-202ENST00000331148 CCDC93Q567U6 631 aa21.16■□□□□ 0.98
CLSTN3-202ENST00000331148 ZNF790Q6PG37 636 aa21.16■□□□□ 0.98
CLSTN3-202ENST00000331148 BRF1Q92994 677 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms