RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PITPNM2Q9BZ72 1349 aa19.77■□□□□ 0.76
CTHRC1-201ENST00000330295 TAF1P21675 1872 aa19.77■□□□□ 0.76
CTHRC1-201ENST00000330295 ZNF609O15014 1411 aa19.77■□□□□ 0.76
CTHRC1-201ENST00000330295 GIGYF2Q6Y7W6 1299 aaKnown RBP19.77■□□□□ 0.76
CTHRC1-201ENST00000330295 TMC4Q7Z404 712 aa19.77■□□□□ 0.76
CTHRC1-201ENST00000330295 ERO1AQ96HE7 468 aa19.77■□□□□ 0.76
CTHRC1-201ENST00000330295 SCN9AQ15858 1988 aa19.76■□□□□ 0.75
CTHRC1-201ENST00000330295 U2SURPO15042 1029 aaKnown RBP19.76■□□□□ 0.75
CTHRC1-201ENST00000330295 VIL1P09327 827 aaKnown RBP19.76■□□□□ 0.75
CTHRC1-201ENST00000330295 ZNF280AP59817 542 aaPredicted RBP19.76■□□□□ 0.75
CTHRC1-201ENST00000330295 ZNF333Q96JL9 665 aa19.76■□□□□ 0.75
CTHRC1-201ENST00000330295 UTP14AQ9BVJ6 771 aaKnown RBP19.76■□□□□ 0.75
CTHRC1-201ENST00000330295 CACNB1Q02641 598 aaPredicted RBP19.75■□□□□ 0.75
CTHRC1-201ENST00000330295 TCIRG1Q13488 830 aa19.75■□□□□ 0.75
CTHRC1-201ENST00000330295 DOK7Q18PE1 504 aa19.75■□□□□ 0.75
CTHRC1-201ENST00000330295 PRAMEF18Q5VWM3 479 aa19.75■□□□□ 0.75
CTHRC1-201ENST00000330295 CD99L2Q8TCZ2 262 aa19.75■□□□□ 0.75
CTHRC1-201ENST00000330295 SCAF8Q9UPN6 1271 aaKnown RBP19.75■□□□□ 0.75
CTHRC1-201ENST00000330295 RRP7AQ9Y3A4 280 aaKnown RBP19.75■□□□□ 0.75
CTHRC1-201ENST00000330295 PHACTR3Q96KR7 559 aa19.74■□□□□ 0.75
CTHRC1-201ENST00000330295 EFCC1Q9HA90 598 aa19.74■□□□□ 0.75
CTHRC1-201ENST00000330295 NSFL1CQ9UNZ2 370 aaKnown RBP19.74■□□□□ 0.75
CTHRC1-201ENST00000330295 C6orf229H3BNL8 230 aa19.73■□□□□ 0.75
CTHRC1-201ENST00000330295 HCLS1P14317 486 aaPredicted RBP19.73■□□□□ 0.75
CTHRC1-201ENST00000330295 MYL6BP14649 208 aa19.73■□□□□ 0.75
CTHRC1-201ENST00000330295 AMER1Q5JTC6 1135 aaPredicted RBP19.73■□□□□ 0.75
CTHRC1-201ENST00000330295 SPRYD7Q5W111 196 aa19.73■□□□□ 0.75
CTHRC1-201ENST00000330295 MCM10Q7L590 875 aa19.73■□□□□ 0.75
CTHRC1-201ENST00000330295 POLLQ9UGP5 575 aa19.73■□□□□ 0.75
CTHRC1-201ENST00000330295 COL3A1P02461 1466 aaPredicted RBP19.73■□□□□ 0.75
CTHRC1-201ENST00000330295 KDM3BQ7LBC6 1761 aa19.72■□□□□ 0.75
CTHRC1-201ENST00000330295 PTPN12Q05209 780 aaKnown RBP19.72■□□□□ 0.75
CTHRC1-201ENST00000330295 NCBP3Q53F19 620 aaKnown RBP19.72■□□□□ 0.75
CTHRC1-201ENST00000330295 IFNL1Q8IU54 200 aa19.72■□□□□ 0.75
CTHRC1-201ENST00000330295 RTF1Q92541 710 aaKnown RBP19.72■□□□□ 0.75
CTHRC1-201ENST00000330295 PRO3102Q9H379 93 aa19.72■□□□□ 0.75
CTHRC1-201ENST00000330295 NF2P35240 595 aa19.71■□□□□ 0.75
CTHRC1-201ENST00000330295 INHBEP58166 350 aa19.71■□□□□ 0.75
CTHRC1-201ENST00000330295 SLC4A8Q2Y0W8 1093 aa19.71■□□□□ 0.75
CTHRC1-201ENST00000330295 AGBL3Q8NEM8 1001 aa19.71■□□□□ 0.75
CTHRC1-201ENST00000330295 NECTIN2Q92692 538 aa19.71■□□□□ 0.75
CTHRC1-201ENST00000330295 EYA3Q99504 573 aa19.71■□□□□ 0.75
CTHRC1-201ENST00000330295 MYOZ2Q9NPC6 264 aa19.71■□□□□ 0.75
CTHRC1-201ENST00000330295 MANSC4A6NHS7 340 aaPredicted RBP19.7■□□□□ 0.74
CTHRC1-201ENST00000330295 NBPF11Q86T75 865 aa19.7■□□□□ 0.74
CTHRC1-201ENST00000330295 SLC9C1Q4G0N8 1177 aa19.69■□□□□ 0.74
CTHRC1-201ENST00000330295 RSBN1LQ6PCB5 846 aaPredicted RBP19.69■□□□□ 0.74
CTHRC1-201ENST00000330295 IGF2BP3O00425 579 aaKnown RBP eCLIP19.68■□□□□ 0.74
CTHRC1-201ENST00000330295 PRKAR2BP31323 418 aa19.68■□□□□ 0.74
CTHRC1-201ENST00000330295 GPSM2P81274 684 aa19.68■□□□□ 0.74
CTHRC1-201ENST00000330295 ARMC9Q7Z3E5 817 aa19.68■□□□□ 0.74
CTHRC1-201ENST00000330295 DPF3Q92784 378 aa19.68■□□□□ 0.74
CTHRC1-201ENST00000330295 RNF39Q9H2S5 420 aa19.68■□□□□ 0.74
CTHRC1-201ENST00000330295 USP17L8P0C7I0 530 aa19.67■□□□□ 0.74
CTHRC1-201ENST00000330295 CAP1Q01518 475 aa19.67■□□□□ 0.74
CTHRC1-201ENST00000330295 DCTN1Q14203 1278 aa19.67■□□□□ 0.74
CTHRC1-201ENST00000330295 LAMB1P07942 1786 aa19.66■□□□□ 0.74
CTHRC1-201ENST00000330295 SP3Q02447 781 aa19.66■□□□□ 0.74
CTHRC1-201ENST00000330295 CRHR2Q13324 411 aa19.66■□□□□ 0.74
CTHRC1-201ENST00000330295 TAF7Q15545 349 aaPredicted RBP19.66■□□□□ 0.74
CTHRC1-201ENST00000330295 LDLRAD1Q5T700 205 aa19.66■□□□□ 0.74
CTHRC1-201ENST00000330295 GMLQ99445 158 aa19.66■□□□□ 0.74
CTHRC1-201ENST00000330295 COL25A1Q9BXS0 654 aaPredicted RBP19.66■□□□□ 0.74
CTHRC1-201ENST00000330295 MIS18AQ9NYP9 233 aa19.66■□□□□ 0.74
CTHRC1-201ENST00000330295 PSME4Q14997 1843 aa19.66■□□□□ 0.74
CTHRC1-201ENST00000330295 LAMA3Q16787 3333 aa19.66■□□□□ 0.74
CTHRC1-201ENST00000330295 SOX1O00570 391 aaPredicted RBP19.65■□□□□ 0.74
CTHRC1-201ENST00000330295 PRKG1Q13976 671 aa19.65■□□□□ 0.74
CTHRC1-201ENST00000330295 TBC1D16Q8TBP0 767 aa19.65■□□□□ 0.74
CTHRC1-201ENST00000330295 ZC3H12CQ9C0D7 883 aaKnown RBP19.65■□□□□ 0.74
CTHRC1-201ENST00000330295 A0A1W2PPC1 479 aa19.64■□□□□ 0.73
CTHRC1-201ENST00000330295 G3V3G9 751 aa19.64■□□□□ 0.73
CTHRC1-201ENST00000330295 MYCP01106 439 aaPredicted RBP19.64■□□□□ 0.73
CTHRC1-201ENST00000330295 NBPF9Q3BBW0 867 aa19.64■□□□□ 0.73
CTHRC1-201ENST00000330295 DCAF8Q5TAQ9 597 aa19.64■□□□□ 0.73
CTHRC1-201ENST00000330295 CELF1Q92879 486 aaKnown RBP19.64■□□□□ 0.73
CTHRC1-201ENST00000330295 LRCH3Q96II8 777 aa19.64■□□□□ 0.73
CTHRC1-201ENST00000330295 RSPH6AQ9H0K4 717 aa19.64■□□□□ 0.73
CTHRC1-201ENST00000330295 PTCH2Q9Y6C5 1203 aa19.64■□□□□ 0.73
CTHRC1-201ENST00000330295 SH3TC1Q8TE82 1336 aa19.63■□□□□ 0.73
CTHRC1-201ENST00000330295 WTIPA6NIX2 430 aaPredicted RBP19.63■□□□□ 0.73
CTHRC1-201ENST00000330295 ZBTB48P10074 688 aaPredicted RBP19.63■□□□□ 0.73
CTHRC1-201ENST00000330295 NLRP10Q86W26 655 aa19.63■□□□□ 0.73
CTHRC1-201ENST00000330295 TRMT112Q9UI30 125 aaKnown RBP19.62■□□□□ 0.73
CTHRC1-201ENST00000330295 ANGEL1Q9UNK9 670 aaKnown RBP19.62■□□□□ 0.73
CTHRC1-201ENST00000330295 ERBB4Q15303 1308 aa19.61■□□□□ 0.73
CTHRC1-201ENST00000330295 OTUD7BQ6GQQ9 843 aa19.61■□□□□ 0.73
CTHRC1-201ENST00000330295 SLC10A4Q96EP9 437 aa19.61■□□□□ 0.73
CTHRC1-201ENST00000330295 COL4A1P02462 1669 aa19.61■□□□□ 0.73
CTHRC1-201ENST00000330295 UNC80Q8N2C7 3258 aa19.6■□□□□ 0.73
CTHRC1-201ENST00000330295 HTATSF1O43719 755 aaKnown RBP19.6■□□□□ 0.73
CTHRC1-201ENST00000330295 WNK4Q96J92 1243 aa19.6■□□□□ 0.73
CTHRC1-201ENST00000330295 EIF4A1P60842 406 aaKnown RBP19.59■□□□□ 0.73
CTHRC1-201ENST00000330295 ARHGEF6Q15052 776 aa19.59■□□□□ 0.73
CTHRC1-201ENST00000330295 LRP10Q7Z4F1 713 aa19.59■□□□□ 0.73
CTHRC1-201ENST00000330295 WNT10BO00744 389 aa19.58■□□□□ 0.72
CTHRC1-201ENST00000330295 HSP90AB3PQ58FF7 597 aa19.58■□□□□ 0.72
CTHRC1-201ENST00000330295 SHISA4Q96DD7 197 aa19.58■□□□□ 0.72
CTHRC1-201ENST00000330295 THUMPD2Q9BTF0 503 aaKnown RBP19.58■□□□□ 0.72
CTHRC1-201ENST00000330295 HTATIP2Q9BUP3 242 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms