RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 MSTNO14793 375 aa3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 MMP20O60882 483 aa3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 NID1P14543 1247 aa3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 MLLT1Q03111 559 aaPredicted RBP3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 NOM1Q5C9Z4 860 aaKnown RBP3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 ALKBH2Q6NS38 261 aa3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 ELMSAN1Q6PJG2 1045 aa3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 C8orf86Q6ZUL3 223 aa3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 RBSNQ9H1K0 784 aa3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 AATKQ6ZMQ8 1374 aa3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 HOXD8P13378 290 aaPredicted RBP3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 EIF2AK2P19525 551 aaKnown RBP3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 TRIM28Q13263 835 aaKnown RBP3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 TRAPPC3LQ5T215 181 aa3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 TTC16Q8NEE8 873 aa3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 NISCHQ9Y2I1 1504 aa3.13□□□□□ -1.91
CCDC144A-201ENST00000328495 ZBTB39O15060 712 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 APBA3O96018 575 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 GHRHP01286 108 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 MPSTP25325 297 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 RAC1P63000 192 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 SF3B2Q13435 895 aaKnown RBP3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 PERM1Q5SV97 790 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 NACC1Q96RE7 527 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 LPIN3Q9BQK8 851 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 CARNS1A5YM72 827 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 ZBTB42B2RXF5 422 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 SCNN1AP37088 669 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 AFF1P51825 1210 aaKnown RBP3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 COL9A3Q14050 684 aaPredicted RBP3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 TTC39BQ5VTQ0 682 aaPredicted RBP3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 PDE12Q6L8Q7 609 aaKnown RBP3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 NUDT16Q96DE0 195 aaKnown RBP3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 NSUN5Q96P11 429 aaKnown RBP3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 LOC102724428A0A0B4J2F2 783 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 FAM13AO94988 1023 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 ABL1P00519 1130 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 EIF1AXP47813 144 aaKnown RBP3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 SIK1P57059 783 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 OR13H1Q8NG92 308 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 EDEM1Q92611 657 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 TTC9Q92623 222 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 SPOCK3Q9BQ16 436 aa3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 SMG9Q9H0W8 520 aaKnown RBP3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 ABI2Q9NYB9 513 aaPredicted RBP3.12□□□□□ -1.91
CCDC144A-201ENST00000328495 MZF1P28698 734 aaPredicted RBP3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 DNM1Q05193 864 aaKnown RBP3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 HYAL2Q12891 473 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 AAMPQ13685 434 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 PHLDB3Q6NSJ2 640 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 HFE2Q6ZVN8 426 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 ATCAYQ86WG3 371 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 RETREG2Q8NC44 543 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 SPACA7Q96KW9 195 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 C1QTNF9BB2RNN3 333 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 ITGB2P05107 769 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 FKBP4Q02790 459 aaKnown RBP eCLIP3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 MTMR3Q13615 1198 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 ZNF438Q7Z4V0 828 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 WFDC8Q8IUA0 241 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 PLD4Q96BZ4 506 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 A0A0A0MRY4 1105 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 FAM229AH3BQW9 127 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 PROCP04070 461 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 PDGFAP04085 211 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 NPR3P17342 541 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 CHRNA4P43681 627 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 MSL1Q68DK7 614 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 CD163Q86VB7 1156 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 DTWD1Q8N5C7 304 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 ELP3Q9H9T3 547 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 EGFL7Q9UHF1 273 aa3.11□□□□□ -1.91
CCDC144A-201ENST00000328495 J3QW42 95 aa3.1□□□□□ -1.91
CCDC144A-201ENST00000328495 ELNP15502 786 aa3.1□□□□□ -1.91
CCDC144A-201ENST00000328495 USP5P45974 858 aa3.1□□□□□ -1.91
CCDC144A-201ENST00000328495 ZNF211Q13398 564 aaPredicted RBP3.1□□□□□ -1.91
CCDC144A-201ENST00000328495 C8orf34Q49A92 452 aa3.1□□□□□ -1.91
CCDC144A-201ENST00000328495 CDK12Q9NYV4 1490 aaPredicted RBP3.1□□□□□ -1.91
CCDC144A-201ENST00000328495 EHHADHQ08426 723 aa3.1□□□□□ -1.91
CCDC144A-201ENST00000328495 GRIK5Q16478 980 aa3.1□□□□□ -1.91
CCDC144A-201ENST00000328495 DMRTC2Q8IXT2 367 aaPredicted RBP3.1□□□□□ -1.91
CCDC144A-201ENST00000328495 CACTIN-AS1Q8N1I8 211 aa3.1□□□□□ -1.91
CCDC144A-201ENST00000328495 C9orf172C9J069 976 aa3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 XKR5Q6UX68 686 aa3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 GLYCTKQ8IVS8 523 aa3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 FMR1NBQ8N0W7 255 aaPredicted RBP3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 POLIQ9UNA4 740 aa3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 H3BRB1 525 aa3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 SMNDC1O75940 238 aaKnown RBP eCLIP3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 GATA4P43694 442 aa3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 GDF6Q6KF10 455 aaPredicted RBP3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 NCAPG2Q86XI2 1143 aa3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 DCAF11Q8TEB1 546 aa3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 TUT1Q9H6E5 874 aaKnown RBP3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 ANO2Q9NQ90 1003 aa3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 TMEM63CQ9P1W3 806 aa3.09□□□□□ -1.91
CCDC144A-201ENST00000328495 ICMTO60725 284 aa3.09□□□□□ -1.92
CCDC144A-201ENST00000328495 KIF4AO95239 1232 aa3.09□□□□□ -1.92
CCDC144A-201ENST00000328495 BAG6P46379 1132 aa3.09□□□□□ -1.92
CCDC144A-201ENST00000328495 NRG1Q02297 640 aaPredicted RBP3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms