RNA–Protein interactions for RNA: ENST00000327892.12

TUBB-205, Transcript of tubulin beta class I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB, Length 2,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-205ENST00000327892 COL15A1P39059 1388 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 POLR3GO15318 223 aaPredicted RBP11.88□□□□□ -0.51
TUBB-205ENST00000327892 KINO60870 393 aaKnown RBP11.88□□□□□ -0.51
TUBB-205ENST00000327892 PDIA4P13667 645 aaKnown RBP11.88□□□□□ -0.51
TUBB-205ENST00000327892 HNRNPH2P55795 449 aaKnown RBP11.88□□□□□ -0.51
TUBB-205ENST00000327892 MTX1Q13505 466 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 ARHGAP29Q52LW3 1261 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 ARMCX5Q6P1M9 558 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 CHST3Q7LGC8 479 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 ENGASEQ8NFI3 743 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 CCDC66A2RUB6 948 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 SMC2O95347 1197 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 CAVIN2O95810 425 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 CYP21A2P08686 494 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 CAPN2P17655 700 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 TMC6Q7Z403 805 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 FSIP1Q8NA03 581 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 SIRT1Q96EB6 747 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 PPP1R13BQ96KQ4 1090 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 XPO4Q9C0E2 1151 aaKnown RBP11.88□□□□□ -0.51
TUBB-205ENST00000327892 IFNKQ9P0W0 207 aa11.88□□□□□ -0.51
TUBB-205ENST00000327892 A0A0G2JLW4 131 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 BTBD11A6QL63 1104 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 CTDNEP1O95476 244 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 DPCR1Q3MIW9 517 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 CCDC73Q6ZRK6 1079 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 ZSCAN16Q9H4T2 348 aaPredicted RBP11.87□□□□□ -0.51
TUBB-205ENST00000327892 ANO10Q9NW15 660 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 RGPD1P0DJD0 1748 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 GIGYF1O75420 1035 aaPredicted RBP11.87□□□□□ -0.51
TUBB-205ENST00000327892 H2AFXP16104 143 aaPredicted RBP11.87□□□□□ -0.51
TUBB-205ENST00000327892 PLA2G4AP47712 749 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 HSPA2P54652 639 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 APOBRQ0VD83 1088 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 TEFQ10587 303 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 BMS1Q14692 1282 aaKnown RBP11.87□□□□□ -0.51
TUBB-205ENST00000327892 OTUD7BQ6GQQ9 843 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 C14orf37Q86TY3 774 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 HOMER1Q86YM7 354 aa11.87□□□□□ -0.51
TUBB-205ENST00000327892 ESF1Q9H501 851 aaKnown RBP11.87□□□□□ -0.51
TUBB-205ENST00000327892 HIP1O00291 1037 aa11.86□□□□□ -0.51
TUBB-205ENST00000327892 CCDC93Q567U6 631 aa11.86□□□□□ -0.51
TUBB-205ENST00000327892 ERC1Q8IUD2 1116 aa11.86□□□□□ -0.51
TUBB-205ENST00000327892 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
TUBB-205ENST00000327892 ALDH8A1Q9H2A2 487 aaPredicted RBP11.86□□□□□ -0.51
TUBB-205ENST00000327892 TAOK2Q9UL54 1235 aa11.86□□□□□ -0.51
TUBB-205ENST00000327892 SEC31AO94979 1220 aaKnown RBP11.86□□□□□ -0.51
TUBB-205ENST00000327892 PNMA6AP0CW24 399 aaPredicted RBP11.86□□□□□ -0.51
TUBB-205ENST00000327892 CDK11BP21127 795 aaKnown RBP11.86□□□□□ -0.51
TUBB-205ENST00000327892 GOLGA8FQ08AF8 430 aa11.86□□□□□ -0.51
TUBB-205ENST00000327892 GOLGA8DPQ0D2H9 430 aa11.86□□□□□ -0.51
TUBB-205ENST00000327892 STOX1Q6ZVD7 989 aa11.86□□□□□ -0.51
TUBB-205ENST00000327892 L2HGDHQ9H9P8 463 aa11.86□□□□□ -0.51
TUBB-205ENST00000327892 DNAI1Q9UI46 699 aa11.86□□□□□ -0.51
TUBB-205ENST00000327892 PCDHA7Q9UN72 937 aa11.86□□□□□ -0.51
TUBB-205ENST00000327892 FANCGO15287 622 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 CTAGE5O15320 804 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 POLR3DP05423 398 aaPredicted RBP11.85□□□□□ -0.51
TUBB-205ENST00000327892 NDUFA8P51970 172 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 FAM160A1Q05DH4 1040 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 TSGA10IPQ3SY00 556 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 CEP57L1Q8IYX8 460 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 FAM177A1Q8N128 213 aaPredicted RBP11.85□□□□□ -0.51
TUBB-205ENST00000327892 NSUN7Q8NE18 718 aaKnown RBP11.85□□□□□ -0.51
TUBB-205ENST00000327892 CYP2C19P33261 490 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 NBPF6Q5VWK0 638 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 KSR2Q6VAB6 950 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 ABTB2Q8N961 1025 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 NBPF4Q96M43 638 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 DNAJC2Q99543 621 aaKnown RBP11.85□□□□□ -0.51
TUBB-205ENST00000327892 TMX1Q9H3N1 280 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 SNRKQ9NRH2 765 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 GJB4Q9NTQ9 266 aa11.85□□□□□ -0.51
TUBB-205ENST00000327892 DBF4Q9UBU7 674 aaPredicted RBP11.85□□□□□ -0.51
TUBB-205ENST00000327892 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.85□□□□□ -0.51
TUBB-205ENST00000327892 MED23Q9ULK4 1368 aa11.84□□□□□ -0.51
TUBB-205ENST00000327892 PTPDC1A2A3K4 754 aa11.84□□□□□ -0.51
TUBB-205ENST00000327892 GRM8O00222 908 aa11.84□□□□□ -0.51
TUBB-205ENST00000327892 LTKP29376 864 aa11.84□□□□□ -0.51
TUBB-205ENST00000327892 LMOD1P29536 600 aaPredicted RBP11.84□□□□□ -0.51
TUBB-205ENST00000327892 EPHA10Q5JZY3 1008 aa11.84□□□□□ -0.51
TUBB-205ENST00000327892 NEK11Q8NG66 645 aa11.84□□□□□ -0.51
TUBB-205ENST00000327892 PXDNLA1KZ92 1463 aa11.84□□□□□ -0.51
TUBB-205ENST00000327892 SETD1AO15047 1707 aaKnown RBP11.84□□□□□ -0.51
TUBB-205ENST00000327892 ATP1A3P13637 1013 aa11.84□□□□□ -0.51
TUBB-205ENST00000327892 ST5P78524 1137 aa11.84□□□□□ -0.51
TUBB-205ENST00000327892 USPL1Q5W0Q7 1092 aa11.84□□□□□ -0.51
TUBB-205ENST00000327892 DDX46Q7L014 1031 aaKnown RBP11.84□□□□□ -0.51
TUBB-205ENST00000327892 FMR1NBQ8N0W7 255 aaPredicted RBP11.84□□□□□ -0.51
TUBB-205ENST00000327892 OSBPL5Q9H0X9 879 aaPredicted RBP11.84□□□□□ -0.51
TUBB-205ENST00000327892 BABAM1Q9NWV8 329 aa11.84□□□□□ -0.51
TUBB-205ENST00000327892 HMG20BQ9P0W2 317 aa11.84□□□□□ -0.51
TUBB-205ENST00000327892 AKAP12Q02952 1782 aa11.84□□□□□ -0.51
TUBB-205ENST00000327892 FAM208AQ9UK61 1670 aaKnown RBP11.83□□□□□ -0.51
TUBB-205ENST00000327892 SFPQP23246 707 aaKnown RBP eCLIP11.83□□□□□ -0.51
TUBB-205ENST00000327892 GSDMDP57764 484 aa11.83□□□□□ -0.51
TUBB-205ENST00000327892 SMARCC2Q8TAQ2 1214 aa11.83□□□□□ -0.51
TUBB-205ENST00000327892 ALDH1L1O75891 902 aa11.83□□□□□ -0.52
TUBB-205ENST00000327892 URI1O94763 535 aaPredicted RBP11.83□□□□□ -0.52
TUBB-205ENST00000327892 UBXN4Q92575 508 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms