RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 GRAPLQ8TC17 118 aaPredicted RBP12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 CELF1Q92879 486 aaKnown RBP12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 RBM17Q96I25 401 aaKnown RBP12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 BCL11AQ9H165 835 aa12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 BSDC1Q9NW68 430 aaPredicted RBP12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 AOX1Q06278 1338 aa12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 RPS8P62241 208 aaKnown RBP12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 VGLL2Q8N8G2 317 aa12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 EAF2Q96CJ1 260 aaPredicted RBP12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 OSBPL3Q9H4L5 887 aa12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 STAP2Q9UGK3 403 aa12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 ZBTB7AO95365 584 aa12.58□□□□□ -0.39
VIPAS39-201ENST00000327028 IFIT2P09913 472 aaKnown RBP12.58□□□□□ -0.39
VIPAS39-201ENST00000327028 PDE1AP54750 535 aa12.58□□□□□ -0.39
VIPAS39-201ENST00000327028 CRAMP1Q96RY5 1269 aa12.58□□□□□ -0.39
VIPAS39-201ENST00000327028 AKAP2Q9Y2D5 859 aa12.58□□□□□ -0.39
VIPAS39-201ENST00000327028 DLEC1Q9Y238 1755 aa12.58□□□□□ -0.39
VIPAS39-201ENST00000327028 PSDA5PKW4 1024 aaPredicted RBP12.58□□□□□ -0.4
VIPAS39-201ENST00000327028 SRGNP10124 158 aa12.58□□□□□ -0.4
VIPAS39-201ENST00000327028 NPR1P16066 1061 aa12.58□□□□□ -0.4
VIPAS39-201ENST00000327028 GPATCH3Q96I76 525 aa12.58□□□□□ -0.4
VIPAS39-201ENST00000327028 POLD1P28340 1107 aa12.57□□□□□ -0.4
VIPAS39-201ENST00000327028 TTC41PQ6P2S7 1318 aa12.57□□□□□ -0.4
VIPAS39-201ENST00000327028 PDE8BO95263 885 aa12.57□□□□□ -0.4
VIPAS39-201ENST00000327028 CHRNDQ07001 517 aa12.57□□□□□ -0.4
VIPAS39-201ENST00000327028 CCDC8Q9H0W5 538 aaPredicted RBP12.57□□□□□ -0.4
VIPAS39-201ENST00000327028 TLR7Q9NYK1 1049 aaKnown RBP12.57□□□□□ -0.4
VIPAS39-201ENST00000327028 DBNLQ9UJU6 430 aaKnown RBP12.57□□□□□ -0.4
VIPAS39-201ENST00000327028 A0A1B0GUL7 405 aa12.56□□□□□ -0.4
VIPAS39-201ENST00000327028 PUM3Q15397 648 aaKnown RBP12.56□□□□□ -0.4
VIPAS39-201ENST00000327028 ATP2B3Q16720 1220 aa12.56□□□□□ -0.4
VIPAS39-201ENST00000327028 TTC22Q5TAA0 569 aa12.56□□□□□ -0.4
VIPAS39-201ENST00000327028 MASTLQ96GX5 879 aa12.56□□□□□ -0.4
VIPAS39-201ENST00000327028 MINPP1Q9UNW1 487 aa12.56□□□□□ -0.4
VIPAS39-201ENST00000327028 ATF5Q9Y2D1 282 aaPredicted RBP12.56□□□□□ -0.4
VIPAS39-201ENST00000327028 BMP2KLQ5H9B9 411 aa12.56□□□□□ -0.4
VIPAS39-201ENST00000327028 TMC4Q7Z404 712 aa12.56□□□□□ -0.4
VIPAS39-201ENST00000327028 C2CD5Q86YS7 1000 aa12.56□□□□□ -0.4
VIPAS39-201ENST00000327028 ECHDC1Q9NTX5 307 aa12.56□□□□□ -0.4
VIPAS39-201ENST00000327028 STYK1Q6J9G0 422 aa12.55□□□□□ -0.4
VIPAS39-201ENST00000327028 SGIP1Q9BQI5 828 aa12.55□□□□□ -0.4
VIPAS39-201ENST00000327028 DBNDD2Q9BQY9 259 aa12.55□□□□□ -0.4
VIPAS39-201ENST00000327028 ANKRD2Q9GZV1 360 aa12.55□□□□□ -0.4
VIPAS39-201ENST00000327028 KIAA1551Q9HCM1 1747 aa12.55□□□□□ -0.4
VIPAS39-201ENST00000327028 CACNA1SQ13698 1873 aa12.55□□□□□ -0.4
VIPAS39-201ENST00000327028 H0YIN7 160 aa12.55□□□□□ -0.4
VIPAS39-201ENST00000327028 BBOX1O75936 387 aa12.55□□□□□ -0.4
VIPAS39-201ENST00000327028 FGFR2P21802 821 aa12.55□□□□□ -0.4
VIPAS39-201ENST00000327028 TSHZ3Q63HK5 1081 aa12.55□□□□□ -0.4
VIPAS39-201ENST00000327028 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
VIPAS39-201ENST00000327028 PI4K2BQ8TCG2 481 aa12.55□□□□□ -0.4
VIPAS39-201ENST00000327028 ERC2O15083 957 aa12.54□□□□□ -0.4
VIPAS39-201ENST00000327028 GSPT1P15170 499 aaKnown RBP12.54□□□□□ -0.4
VIPAS39-201ENST00000327028 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
VIPAS39-201ENST00000327028 LPIN2Q92539 896 aa12.54□□□□□ -0.4
VIPAS39-201ENST00000327028 NEUROD6Q96NK8 337 aa12.54□□□□□ -0.4
VIPAS39-201ENST00000327028 LTBP1Q14766 1721 aa12.54□□□□□ -0.4
VIPAS39-201ENST00000327028 TIMM10P62072 90 aa12.54□□□□□ -0.4
VIPAS39-201ENST00000327028 PPEF1O14829 653 aaPredicted RBP12.53□□□□□ -0.4
VIPAS39-201ENST00000327028 TAF5LO75529 589 aa12.53□□□□□ -0.4
VIPAS39-201ENST00000327028 GLRX3O76003 335 aaKnown RBP12.53□□□□□ -0.4
VIPAS39-201ENST00000327028 SLC5A1P13866 664 aa12.53□□□□□ -0.4
VIPAS39-201ENST00000327028 ADORA1P30542 326 aa12.53□□□□□ -0.4
VIPAS39-201ENST00000327028 XAGE2Q96GT9 111 aa12.53□□□□□ -0.4
VIPAS39-201ENST00000327028 AK9Q5TCS8 1911 aa12.52□□□□□ -0.4
VIPAS39-201ENST00000327028 CHRNA5P30532 468 aa12.52□□□□□ -0.4
VIPAS39-201ENST00000327028 PTGER2P43116 358 aa12.52□□□□□ -0.4
VIPAS39-201ENST00000327028 UBE4AQ14139 1066 aa12.52□□□□□ -0.4
VIPAS39-201ENST00000327028 XDHP47989 1333 aa12.52□□□□□ -0.4
VIPAS39-201ENST00000327028 IFIT1P09914 478 aaKnown RBP12.52□□□□□ -0.41
VIPAS39-201ENST00000327028 ATP5JP18859 108 aa12.52□□□□□ -0.41
VIPAS39-201ENST00000327028 ZNF622Q969S3 477 aaKnown RBP eCLIP12.52□□□□□ -0.41
VIPAS39-201ENST00000327028 SP8Q8IXZ3 490 aa12.51□□□□□ -0.41
VIPAS39-201ENST00000327028 CNKSR1Q969H4 720 aa12.51□□□□□ -0.41
VIPAS39-201ENST00000327028 ATP6V0A2Q9Y487 856 aa12.51□□□□□ -0.41
VIPAS39-201ENST00000327028 SLX4Q8IY92 1834 aa12.51□□□□□ -0.41
VIPAS39-201ENST00000327028 CCDC158Q5M9N0 1113 aa12.51□□□□□ -0.41
VIPAS39-201ENST00000327028 GORABQ5T7V8 394 aa12.51□□□□□ -0.41
VIPAS39-201ENST00000327028 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.51□□□□□ -0.41
VIPAS39-201ENST00000327028 SDSP20132 328 aa12.5□□□□□ -0.41
VIPAS39-201ENST00000327028 KCNJ4P48050 445 aa12.5□□□□□ -0.41
VIPAS39-201ENST00000327028 LEMD3Q9Y2U8 911 aa12.5□□□□□ -0.41
VIPAS39-201ENST00000327028 SNAP23O00161 211 aa12.5□□□□□ -0.41
VIPAS39-201ENST00000327028 TGFB2P61812 414 aa12.5□□□□□ -0.41
VIPAS39-201ENST00000327028 TTC39AQ5SRH9 613 aa12.5□□□□□ -0.41
VIPAS39-201ENST00000327028 PRPF40BQ6NWY9 871 aaKnown RBP12.5□□□□□ -0.41
VIPAS39-201ENST00000327028 SLC51AQ86UW1 340 aa12.5□□□□□ -0.41
VIPAS39-201ENST00000327028 ZNF512BQ96KM6 892 aaPredicted RBP12.5□□□□□ -0.41
VIPAS39-201ENST00000327028 PODXL2Q9NZ53 605 aa12.5□□□□□ -0.41
VIPAS39-201ENST00000327028 ANKIB1Q9P2G1 1089 aa12.5□□□□□ -0.41
VIPAS39-201ENST00000327028 BRCA1P38398 1863 aaKnown RBP12.49□□□□□ -0.41
VIPAS39-201ENST00000327028 ZNF804BA4D1E1 1349 aa12.49□□□□□ -0.41
VIPAS39-201ENST00000327028 GPSM2P81274 684 aa12.49□□□□□ -0.41
VIPAS39-201ENST00000327028 SPON1Q9HCB6 807 aa12.49□□□□□ -0.41
VIPAS39-201ENST00000327028 CD2APQ9Y5K6 639 aa12.49□□□□□ -0.41
VIPAS39-201ENST00000327028 DUOX1Q9NRD9 1551 aa12.49□□□□□ -0.41
VIPAS39-201ENST00000327028 DPEP1P16444 411 aa12.49□□□□□ -0.41
VIPAS39-201ENST00000327028 C8orf34Q49A92 452 aa12.49□□□□□ -0.41
VIPAS39-201ENST00000327028 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms