RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 SLC52A2Q9HAB3 445 aa15.5■□□□□ 0.07
CLGN-201ENST00000325617 SLIT1O75093 1534 aa15.5■□□□□ 0.07
CLGN-201ENST00000325617 RGPD5Q99666 1765 aa15.5■□□□□ 0.07
CLGN-201ENST00000325617 RFX5P48382 616 aaPredicted RBP15.5■□□□□ 0.07
CLGN-201ENST00000325617 ZNF165P49910 485 aa15.5■□□□□ 0.07
CLGN-201ENST00000325617 PUS3Q9BZE2 481 aaKnown RBP15.5■□□□□ 0.07
CLGN-201ENST00000325617 KAT6BQ8WYB5 2073 aa15.5■□□□□ 0.07
CLGN-201ENST00000325617 MED23Q9ULK4 1368 aa15.5■□□□□ 0.07
CLGN-201ENST00000325617 ATP2B3Q16720 1220 aa15.49■□□□□ 0.07
CLGN-201ENST00000325617 GTF3C6Q969F1 213 aa15.49■□□□□ 0.07
CLGN-201ENST00000325617 CYP27B1O15528 508 aa15.49■□□□□ 0.07
CLGN-201ENST00000325617 A1BGP04217 495 aa15.49■□□□□ 0.07
CLGN-201ENST00000325617 ISM2Q6H9L7 571 aa15.49■□□□□ 0.07
CLGN-201ENST00000325617 GOLPH3LQ9H4A5 285 aa15.49■□□□□ 0.07
CLGN-201ENST00000325617 TTC5Q8N0Z6 440 aa15.48■□□□□ 0.07
CLGN-201ENST00000325617 ZHX1Q9UKY1 873 aaPredicted RBP15.48■□□□□ 0.07
CLGN-201ENST00000325617 NPHP3Q7Z494 1330 aa15.48■□□□□ 0.07
CLGN-201ENST00000325617 CTDNEP1O95476 244 aa15.48■□□□□ 0.07
CLGN-201ENST00000325617 RESTQ13127 1097 aa15.48■□□□□ 0.07
CLGN-201ENST00000325617 PPP4R3BQ5MIZ7 849 aa15.48■□□□□ 0.07
CLGN-201ENST00000325617 N4BP2Q86UW6 1770 aaPredicted RBP15.48■□□□□ 0.07
CLGN-201ENST00000325617 PROSER2Q86WR7 435 aaPredicted RBP15.48■□□□□ 0.07
CLGN-201ENST00000325617 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLGN-201ENST00000325617 V9GYY5 206 aaPredicted RBP15.48■□□□□ 0.07
CLGN-201ENST00000325617 MED1Q15648 1581 aaPredicted RBP15.47■□□□□ 0.07
CLGN-201ENST00000325617 HEG1Q9ULI3 1381 aa15.47■□□□□ 0.07
CLGN-201ENST00000325617 PHKG2P15735 406 aa15.47■□□□□ 0.07
CLGN-201ENST00000325617 PTPN21Q16825 1174 aa15.47■□□□□ 0.07
CLGN-201ENST00000325617 PI16Q6UXB8 463 aa15.47■□□□□ 0.07
CLGN-201ENST00000325617 CACTINQ8WUQ7 758 aaKnown RBP15.47■□□□□ 0.07
CLGN-201ENST00000325617 USP28Q96RU2 1077 aa15.47■□□□□ 0.07
CLGN-201ENST00000325617 KIF3AQ9Y496 699 aa15.47■□□□□ 0.07
CLGN-201ENST00000325617 ERBB3P21860 1342 aa15.47■□□□□ 0.07
CLGN-201ENST00000325617 HIP1O00291 1037 aa15.47■□□□□ 0.07
CLGN-201ENST00000325617 PDCP20941 246 aa15.47■□□□□ 0.07
CLGN-201ENST00000325617 FKBP4Q02790 459 aaKnown RBP eCLIP15.47■□□□□ 0.07
CLGN-201ENST00000325617 FILIP1Q7Z7B0 1213 aa15.47■□□□□ 0.07
CLGN-201ENST00000325617 USP27XA6NNY8 438 aa15.46■□□□□ 0.07
CLGN-201ENST00000325617 POLR3DP05423 398 aaPredicted RBP15.46■□□□□ 0.07
CLGN-201ENST00000325617 TRMT1Q9NXH9 659 aaKnown RBP15.46■□□□□ 0.07
CLGN-201ENST00000325617 DENND2AQ9ULE3 1009 aa15.46■□□□□ 0.07
CLGN-201ENST00000325617 KDM6AO15550 1401 aaPredicted RBP15.46■□□□□ 0.07
CLGN-201ENST00000325617 ATP5JP18859 108 aa15.46■□□□□ 0.07
CLGN-201ENST00000325617 MCMDC2Q4G0Z9 681 aa15.46■□□□□ 0.07
CLGN-201ENST00000325617 CCAR1Q8IX12 1150 aaKnown RBP15.46■□□□□ 0.07
CLGN-201ENST00000325617 FMNL2Q96PY5 1086 aa15.46■□□□□ 0.07
CLGN-201ENST00000325617 SCAND2PQ9GZW5 306 aaPredicted RBP15.46■□□□□ 0.07
CLGN-201ENST00000325617 CLSTN2Q9H4D0 955 aa15.46■□□□□ 0.07
CLGN-201ENST00000325617 SPTLC3Q9NUV7 552 aa15.46■□□□□ 0.07
CLGN-201ENST00000325617 UTYO14607 1347 aa15.46■□□□□ 0.06
CLGN-201ENST00000325617 PTPDC1A2A3K4 754 aa15.46■□□□□ 0.06
CLGN-201ENST00000325617 U2AF2P26368 475 aaKnown RBP eCLIP15.46■□□□□ 0.06
CLGN-201ENST00000325617 BIN1O00499 593 aa15.45■□□□□ 0.06
CLGN-201ENST00000325617 TATP17735 454 aaPredicted RBP15.45■□□□□ 0.06
CLGN-201ENST00000325617 ZNF75DP51815 510 aa15.45■□□□□ 0.06
CLGN-201ENST00000325617 SYNE4Q8N205 404 aa15.45■□□□□ 0.06
CLGN-201ENST00000325617 CRYBG1Q9Y4K1 1723 aa15.45■□□□□ 0.06
CLGN-201ENST00000325617 NBPF26B4DH59 902 aa15.45■□□□□ 0.06
CLGN-201ENST00000325617 NPHP1O15259 732 aa15.45■□□□□ 0.06
CLGN-201ENST00000325617 ANKRD1Q15327 319 aa15.45■□□□□ 0.06
CLGN-201ENST00000325617 NBPF14Q5TI25 921 aa15.45■□□□□ 0.06
CLGN-201ENST00000325617 NBPF10Q6P3W6 841 aaKnown RBP15.45■□□□□ 0.06
CLGN-201ENST00000325617 LRP10Q7Z4F1 713 aa15.45■□□□□ 0.06
CLGN-201ENST00000325617 STK11IPQ8N1F8 1099 aa15.45■□□□□ 0.06
CLGN-201ENST00000325617 NBPF15Q8N660 670 aa15.45■□□□□ 0.06
CLGN-201ENST00000325617 COPRSQ9NQ92 184 aa15.45■□□□□ 0.06
CLGN-201ENST00000325617 CLIP2Q9UDT6 1046 aa15.45■□□□□ 0.06
CLGN-201ENST00000325617 A0A1B0GVL5 298 aa15.44■□□□□ 0.06
CLGN-201ENST00000325617 RXRAP19793 462 aa15.44■□□□□ 0.06
CLGN-201ENST00000325617 ZSCAN25Q6NSZ9 544 aa15.44■□□□□ 0.06
CLGN-201ENST00000325617 NSUN7Q8NE18 718 aaKnown RBP15.44■□□□□ 0.06
CLGN-201ENST00000325617 ADORA1P30542 326 aa15.43■□□□□ 0.06
CLGN-201ENST00000325617 ME1P48163 572 aa15.43■□□□□ 0.06
CLGN-201ENST00000325617 CABP4P57796 275 aa15.43■□□□□ 0.06
CLGN-201ENST00000325617 NKX2-3Q8TAU0 364 aa15.43■□□□□ 0.06
CLGN-201ENST00000325617 FER1L4A9Z1Z3 1794 aa15.43■□□□□ 0.06
CLGN-201ENST00000325617 SNRPA1P09661 255 aaKnown RBP15.43■□□□□ 0.06
CLGN-201ENST00000325617 ADD1P35611 737 aaKnown RBP15.43■□□□□ 0.06
CLGN-201ENST00000325617 M0R2C6 588 aa15.43■□□□□ 0.06
CLGN-201ENST00000325617 PAG1Q9NWQ8 432 aa15.43■□□□□ 0.06
CLGN-201ENST00000325617 USPL1Q5W0Q7 1092 aa15.42■□□□□ 0.06
CLGN-201ENST00000325617 ATG9AQ7Z3C6 839 aa15.42■□□□□ 0.06
CLGN-201ENST00000325617 HAUS7Q99871 368 aa15.42■□□□□ 0.06
CLGN-201ENST00000325617 CHMP4AQ9BY43 222 aa15.42■□□□□ 0.06
CLGN-201ENST00000325617 LMO7Q8WWI1 1683 aa15.42■□□□□ 0.06
CLGN-201ENST00000325617 E7EWF7 191 aa15.42■□□□□ 0.06
CLGN-201ENST00000325617 WASHC4Q2M389 1173 aa15.42■□□□□ 0.06
CLGN-201ENST00000325617 PRIMPOLQ96LW4 560 aa15.42■□□□□ 0.06
CLGN-201ENST00000325617 HDAC5Q9UQL6 1122 aa15.42■□□□□ 0.06
CLGN-201ENST00000325617 MEGF6O75095 1541 aa15.42■□□□□ 0.06
CLGN-201ENST00000325617 C5P01031 1676 aa15.42■□□□□ 0.06
CLGN-201ENST00000325617 TNNT1P13805 278 aa15.41■□□□□ 0.06
CLGN-201ENST00000325617 SCARF1Q14162 830 aa15.41■□□□□ 0.06
CLGN-201ENST00000325617 TPD52L1Q16890 204 aaPredicted RBP15.41■□□□□ 0.06
CLGN-201ENST00000325617 ILDR1Q86SU0 546 aaPredicted RBP15.41■□□□□ 0.06
CLGN-201ENST00000325617 FSIP1Q8NA03 581 aa15.41■□□□□ 0.06
CLGN-201ENST00000325617 AIFM3Q96NN9 605 aa15.41■□□□□ 0.06
CLGN-201ENST00000325617 ELP1O95163 1332 aa15.41■□□□□ 0.06
CLGN-201ENST00000325617 GOLGA6L6A8MZA4 724 aa15.41■□□□□ 0.06
CLGN-201ENST00000325617 HSPD1P10809 573 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms