RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 LRRC2Q9BYS8 371 aa20.92■□□□□ 0.94
PRKCB-202ENST00000321728 NAT10Q9H0A0 1025 aaKnown RBP20.92■□□□□ 0.94
PRKCB-202ENST00000321728 HDAC5Q9UQL6 1122 aa20.92■□□□□ 0.94
PRKCB-202ENST00000321728 PIK3C2AO00443 1686 aa20.92■□□□□ 0.94
PRKCB-202ENST00000321728 HOXB7P09629 217 aa20.91■□□□□ 0.94
PRKCB-202ENST00000321728 BMS1Q14692 1282 aaKnown RBP20.91■□□□□ 0.94
PRKCB-202ENST00000321728 TSGA10IPQ3SY00 556 aa20.91■□□□□ 0.94
PRKCB-202ENST00000321728 EDC3Q96F86 508 aaKnown RBP20.91■□□□□ 0.94
PRKCB-202ENST00000321728 RCOR1Q9UKL0 485 aa20.91■□□□□ 0.94
PRKCB-202ENST00000321728 EID1Q9Y6B2 187 aa20.91■□□□□ 0.94
PRKCB-202ENST00000321728 ALDH1L1O75891 902 aa20.91■□□□□ 0.94
PRKCB-202ENST00000321728 PROSER3Q2NL68 480 aa20.91■□□□□ 0.94
PRKCB-202ENST00000321728 NOL10Q9BSC4 688 aaKnown RBP20.91■□□□□ 0.94
PRKCB-202ENST00000321728 ADD1P35611 737 aaKnown RBP20.91■□□□□ 0.94
PRKCB-202ENST00000321728 ME1P48163 572 aa20.91■□□□□ 0.94
PRKCB-202ENST00000321728 SYT10Q6XYQ8 523 aa20.91■□□□□ 0.94
PRKCB-202ENST00000321728 DBF4Q9UBU7 674 aaPredicted RBP20.91■□□□□ 0.94
PRKCB-202ENST00000321728 FAM160A1Q05DH4 1040 aa20.9■□□□□ 0.94
PRKCB-202ENST00000321728 SCRN1Q12765 414 aa20.9■□□□□ 0.94
PRKCB-202ENST00000321728 NBPF6Q5VWK0 638 aa20.9■□□□□ 0.94
PRKCB-202ENST00000321728 FSIP1Q8NA03 581 aa20.9■□□□□ 0.94
PRKCB-202ENST00000321728 NBPF4Q96M43 638 aa20.9■□□□□ 0.94
PRKCB-202ENST00000321728 SUCLG2Q96I99 432 aa20.9■□□□□ 0.94
PRKCB-202ENST00000321728 USP28Q96RU2 1077 aa20.9■□□□□ 0.94
PRKCB-202ENST00000321728 BICC1Q9H694 974 aaKnown RBP20.9■□□□□ 0.94
PRKCB-202ENST00000321728 BTBD11A6QL63 1104 aa20.89■□□□□ 0.93
PRKCB-202ENST00000321728 SMC2O95347 1197 aa20.89■□□□□ 0.93
PRKCB-202ENST00000321728 KCNA6P17658 529 aa20.89■□□□□ 0.93
PRKCB-202ENST00000321728 TEFQ10587 303 aa20.89■□□□□ 0.93
PRKCB-202ENST00000321728 E4F1Q66K89 784 aaPredicted RBP20.89■□□□□ 0.93
PRKCB-202ENST00000321728 IRX5P78411 483 aaPredicted RBP20.89■□□□□ 0.93
PRKCB-202ENST00000321728 ZRSR1Q15695 479 aaKnown RBP20.89■□□□□ 0.93
PRKCB-202ENST00000321728 NBPF11Q86T75 865 aa20.89■□□□□ 0.93
PRKCB-202ENST00000321728 PPP1R13BQ96KQ4 1090 aa20.89■□□□□ 0.93
PRKCB-202ENST00000321728 SDF4Q9BRK5 362 aa20.89■□□□□ 0.93
PRKCB-202ENST00000321728 KCND1Q9NSA2 647 aa20.89■□□□□ 0.93
PRKCB-202ENST00000321728 CALCOCO1Q9P1Z2 691 aa20.89■□□□□ 0.93
PRKCB-202ENST00000321728 PLEKHG1Q9ULL1 1385 aa20.88■□□□□ 0.93
PRKCB-202ENST00000321728 KSR2Q6VAB6 950 aa20.88■□□□□ 0.93
PRKCB-202ENST00000321728 LRRN4CLQ8ND94 238 aa20.88■□□□□ 0.93
PRKCB-202ENST00000321728 PPFIA3O75145 1194 aa20.88■□□□□ 0.93
PRKCB-202ENST00000321728 H2AFXP16104 143 aaPredicted RBP20.88■□□□□ 0.93
PRKCB-202ENST00000321728 AIMP1Q12904 312 aaKnown RBP20.88■□□□□ 0.93
PRKCB-202ENST00000321728 TMC6Q7Z403 805 aa20.88■□□□□ 0.93
PRKCB-202ENST00000321728 KLHDC4Q8TBB5 520 aa20.88■□□□□ 0.93
PRKCB-202ENST00000321728 OSBPL5Q9H0X9 879 aaPredicted RBP20.88■□□□□ 0.93
PRKCB-202ENST00000321728 L2HGDHQ9H9P8 463 aa20.88■□□□□ 0.93
PRKCB-202ENST00000321728 CEMIPQ8WUJ3 1361 aa20.87■□□□□ 0.93
PRKCB-202ENST00000321728 ENGASEQ8NFI3 743 aa20.87■□□□□ 0.93
PRKCB-202ENST00000321728 ZNF396Q96N95 335 aaPredicted RBP20.87■□□□□ 0.93
PRKCB-202ENST00000321728 IMPACTQ9P2X3 320 aa20.87■□□□□ 0.93
PRKCB-202ENST00000321728 GRM8O00222 908 aa20.87■□□□□ 0.93
PRKCB-202ENST00000321728 GORABQ5T7V8 394 aa20.87■□□□□ 0.93
PRKCB-202ENST00000321728 USPL1Q5W0Q7 1092 aa20.87■□□□□ 0.93
PRKCB-202ENST00000321728 NAA16Q6N069 864 aaPredicted RBP20.87■□□□□ 0.93
PRKCB-202ENST00000321728 NAP1L2Q9ULW6 460 aaPredicted RBP20.87■□□□□ 0.93
PRKCB-202ENST00000321728 NWD1Q149M9 1564 aa20.87■□□□□ 0.93
PRKCB-202ENST00000321728 DIP2AQ14689 1571 aa20.86■□□□□ 0.93
PRKCB-202ENST00000321728 SFPQP23246 707 aaKnown RBP eCLIP20.86■□□□□ 0.93
PRKCB-202ENST00000321728 CLCN6P51797 869 aa20.86■□□□□ 0.93
PRKCB-202ENST00000321728 ARHGAP29Q52LW3 1261 aa20.86■□□□□ 0.93
PRKCB-202ENST00000321728 CCDC129Q6ZRS4 1044 aa20.86■□□□□ 0.93
PRKCB-202ENST00000321728 HOMER1Q86YM7 354 aa20.86■□□□□ 0.93
PRKCB-202ENST00000321728 GUCY1B3Q02153 619 aa20.86■□□□□ 0.93
PRKCB-202ENST00000321728 SMARCC2Q8TAQ2 1214 aa20.86■□□□□ 0.93
PRKCB-202ENST00000321728 KAZALD1Q96I82 304 aa20.86■□□□□ 0.93
PRKCB-202ENST00000321728 XPO4Q9C0E2 1151 aaKnown RBP20.86■□□□□ 0.93
PRKCB-202ENST00000321728 FHOD1Q9Y613 1164 aa20.86■□□□□ 0.93
PRKCB-202ENST00000321728 CCDC150Q8NCX0 1101 aa20.85■□□□□ 0.93
PRKCB-202ENST00000321728 FMNL2Q96PY5 1086 aa20.85■□□□□ 0.93
PRKCB-202ENST00000321728 IFNKQ9P0W0 207 aa20.85■□□□□ 0.93
PRKCB-202ENST00000321728 JCADQ9P266 1359 aa20.85■□□□□ 0.93
PRKCB-202ENST00000321728 PTPDC1A2A3K4 754 aa20.85■□□□□ 0.93
PRKCB-202ENST00000321728 NRDCO43847 1150 aa20.85■□□□□ 0.93
PRKCB-202ENST00000321728 CYP21A2P08686 494 aa20.85■□□□□ 0.93
PRKCB-202ENST00000321728 FAM193AP78312 1265 aa20.85■□□□□ 0.93
PRKCB-202ENST00000321728 ARMCX5Q6P1M9 558 aa20.85■□□□□ 0.93
PRKCB-202ENST00000321728 NSUN7Q8NE18 718 aaKnown RBP20.85■□□□□ 0.93
PRKCB-202ENST00000321728 LLPHQ9BRT6 129 aaKnown RBP20.85■□□□□ 0.93
PRKCB-202ENST00000321728 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.85■□□□□ 0.933e-7■■□□□ 11.9
PRKCB-202ENST00000321728 NDUFB9Q9Y6M9 179 aa20.85■□□□□ 0.93
PRKCB-202ENST00000321728 CCT2P78371 535 aaKnown RBP20.84■□□□□ 0.93
PRKCB-202ENST00000321728 LMOD2Q6P5Q4 547 aa20.84■□□□□ 0.93
PRKCB-202ENST00000321728 ZNF530Q6P9A1 599 aaPredicted RBP20.84■□□□□ 0.93
PRKCB-202ENST00000321728 COL15A1P39059 1388 aa20.84■□□□□ 0.93
PRKCB-202ENST00000321728 CHGBP05060 677 aa20.84■□□□□ 0.93
PRKCB-202ENST00000321728 U3KPZ7 1027 aaPredicted RBP20.84■□□□□ 0.93
PRKCB-202ENST00000321728 VGLL3A8MV65 326 aa20.83■□□□□ 0.93
PRKCB-202ENST00000321728 PFKFB2O60825 505 aa20.83■□□□□ 0.93
PRKCB-202ENST00000321728 CREBRFQ8IUR6 639 aa20.83■□□□□ 0.93
PRKCB-202ENST00000321728 SEC62Q99442 399 aaKnown RBP20.83■□□□□ 0.93
PRKCB-202ENST00000321728 A0A1B0GVL5 298 aa20.83■□□□□ 0.92
PRKCB-202ENST00000321728 PSDA5PKW4 1024 aaPredicted RBP20.83■□□□□ 0.92
PRKCB-202ENST00000321728 PNMA6AP0CW24 399 aaPredicted RBP20.83■□□□□ 0.92
PRKCB-202ENST00000321728 DPCR1Q3MIW9 517 aa20.83■□□□□ 0.92
PRKCB-202ENST00000321728 LINS1Q8NG48 757 aa20.83■□□□□ 0.92
PRKCB-202ENST00000321728 MRPS27Q92552 414 aaKnown RBP20.83■□□□□ 0.92
PRKCB-202ENST00000321728 CCDC9Q9Y3X0 531 aaKnown RBP20.83■□□□□ 0.92
PRKCB-202ENST00000321728 CYP2C19P33261 490 aa20.82■□□□□ 0.92
PRKCB-202ENST00000321728 APOBRQ0VD83 1088 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms