RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 PTPN21Q16825 1174 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 CWF19L2Q2TBE0 894 aaKnown RBP11.31□□□□□ -0.6
PTPRA-202ENST00000318266 BEND3Q5T5X7 828 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 TMC6Q7Z403 805 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 DHX40Q8IX18 779 aaKnown RBP11.31□□□□□ -0.6
PTPRA-202ENST00000318266 EPC1Q9H2F5 836 aa11.31□□□□□ -0.6
PTPRA-202ENST00000318266 CAPN2P17655 700 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 CDC25BP30305 580 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 E4F1Q66K89 784 aaPredicted RBP11.3□□□□□ -0.6
PTPRA-202ENST00000318266 ISM2Q6H9L7 571 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 TMX1Q9H3N1 280 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 CALCOCO1Q9P1Z2 691 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 DLC1Q96QB1 1528 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 LRP6O75581 1613 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 NEMFO60524 1076 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 SEC31AO94979 1220 aaKnown RBP11.3□□□□□ -0.6
PTPRA-202ENST00000318266 BMS1Q14692 1282 aaKnown RBP11.3□□□□□ -0.6
PTPRA-202ENST00000318266 ANKRD1Q15327 319 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 CCDC129Q6ZRS4 1044 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 EAF2Q96CJ1 260 aaPredicted RBP11.3□□□□□ -0.6
PTPRA-202ENST00000318266 ZFP91Q96JP5 570 aaPredicted RBP11.3□□□□□ -0.6
PTPRA-202ENST00000318266 SDF4Q9BRK5 362 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 SLAIN2Q9P270 581 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 Q6ZUG5 572 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 FSIP1Q8NA03 581 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 DNAI1Q9UI46 699 aa11.3□□□□□ -0.6
PTPRA-202ENST00000318266 CCT2P78371 535 aaKnown RBP11.29□□□□□ -0.6
PTPRA-202ENST00000318266 SARM1Q6SZW1 724 aa11.29□□□□□ -0.6
PTPRA-202ENST00000318266 CEP57L1Q8IYX8 460 aa11.29□□□□□ -0.6
PTPRA-202ENST00000318266 PPP1R13BQ96KQ4 1090 aa11.29□□□□□ -0.6
PTPRA-202ENST00000318266 USP28Q96RU2 1077 aa11.29□□□□□ -0.6
PTPRA-202ENST00000318266 SEC62Q99442 399 aaKnown RBP11.29□□□□□ -0.6
PTPRA-202ENST00000318266 ZCCHC17Q9NP64 241 aaKnown RBP11.29□□□□□ -0.6
PTPRA-202ENST00000318266 IFNKQ9P0W0 207 aa11.29□□□□□ -0.6
PTPRA-202ENST00000318266 CFAP45Q9UL16 551 aa11.29□□□□□ -0.6
PTPRA-202ENST00000318266 FHOD1Q9Y613 1164 aa11.29□□□□□ -0.6
PTPRA-202ENST00000318266 HTATSF1O43719 755 aaKnown RBP11.29□□□□□ -0.6
PTPRA-202ENST00000318266 PNMA6AP0CW24 399 aaPredicted RBP11.29□□□□□ -0.6
PTPRA-202ENST00000318266 RXRBP28702 533 aa11.29□□□□□ -0.6
PTPRA-202ENST00000318266 ZRSR1Q15695 479 aaKnown RBP11.29□□□□□ -0.6
PTPRA-202ENST00000318266 ADCY9O60503 1353 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 NBPF11Q86T75 865 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 KCNB2Q92953 911 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 XPO4Q9C0E2 1151 aaKnown RBP11.28□□□□□ -0.6
PTPRA-202ENST00000318266 A0A1B0GVL5 298 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 KLHL34Q8N239 644 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 NCOA5Q9HCD5 579 aaKnown RBP11.28□□□□□ -0.6
PTPRA-202ENST00000318266 ANO10Q9NW15 660 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 SFPQP23246 707 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTPRA-202ENST00000318266 PLA2G4AP47712 749 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 GOLGA8FQ08AF8 430 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 GOLGA8DPQ0D2H9 430 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 AIMP1Q12904 312 aaKnown RBP11.28□□□□□ -0.6
PTPRA-202ENST00000318266 DPCR1Q3MIW9 517 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 ARMCX5Q6P1M9 558 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 C14orf37Q86TY3 774 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 NGDNQ8NEJ9 315 aaKnown RBP11.28□□□□□ -0.6
PTPRA-202ENST00000318266 CCDC34Q96HJ3 373 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 MAP3K2Q9Y2U5 619 aa11.28□□□□□ -0.6
PTPRA-202ENST00000318266 URI1O94763 535 aaPredicted RBP11.27□□□□□ -0.61
PTPRA-202ENST00000318266 H2AFXP16104 143 aaPredicted RBP11.27□□□□□ -0.61
PTPRA-202ENST00000318266 CYP2C19P33261 490 aa11.27□□□□□ -0.61
PTPRA-202ENST00000318266 G3BP1Q13283 466 aaKnown RBP eCLIP11.27□□□□□ -0.61
PTPRA-202ENST00000318266 UBXN4Q92575 508 aa11.27□□□□□ -0.61
PTPRA-202ENST00000318266 LGR6Q9HBX8 967 aa11.27□□□□□ -0.61
PTPRA-202ENST00000318266 FAM53CQ9NYF3 392 aa11.27□□□□□ -0.61
PTPRA-202ENST00000318266 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.27□□□□□ -0.616e-7■■■□□ 15.6
PTPRA-202ENST00000318266 SASH1O94885 1247 aa11.27□□□□□ -0.61
PTPRA-202ENST00000318266 SCRN1Q12765 414 aa11.27□□□□□ -0.61
PTPRA-202ENST00000318266 TMCO3Q6UWJ1 677 aa11.27□□□□□ -0.61
PTPRA-202ENST00000318266 MNS1Q8NEH6 495 aa11.27□□□□□ -0.61
PTPRA-202ENST00000318266 NEK1Q96PY6 1258 aa11.27□□□□□ -0.61
PTPRA-202ENST00000318266 PEAK1Q9H792 1746 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 IGSF1Q8N6C5 1336 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 USP42Q9H9J4 1324 aaKnown RBP11.26□□□□□ -0.61
PTPRA-202ENST00000318266 CAVIN2O95810 425 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 LMOD1P29536 600 aaPredicted RBP11.26□□□□□ -0.61
PTPRA-202ENST00000318266 GYS2P54840 703 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 NLRP6P59044 892 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 ST5P78524 1137 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 CHST3Q7LGC8 479 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 C19orf44Q9H6X5 657 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 MARF1Q9Y4F3 1742 aaKnown RBP11.26□□□□□ -0.61
PTPRA-202ENST00000318266 FLT4P35916 1363 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 TEFQ10587 303 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 GNL2Q13823 731 aaKnown RBP11.26□□□□□ -0.61
PTPRA-202ENST00000318266 PROSER3Q2NL68 480 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 SLFNL1Q499Z3 407 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 OTUD7BQ6GQQ9 843 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 CERS3Q8IU89 383 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 APOBRQ0VD83 1088 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 SLC26A8Q96RN1 970 aa11.26□□□□□ -0.61
PTPRA-202ENST00000318266 DNAJC2Q99543 621 aaKnown RBP11.26□□□□□ -0.61
PTPRA-202ENST00000318266 ADD1P35611 737 aaKnown RBP11.25□□□□□ -0.61
PTPRA-202ENST00000318266 GSDMDP57764 484 aa11.25□□□□□ -0.61
PTPRA-202ENST00000318266 FAM160A1Q05DH4 1040 aa11.25□□□□□ -0.61
PTPRA-202ENST00000318266 RAD51AP2Q09MP3 1159 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms