RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 USP19O94966 1318 aa15.48■□□□□ 0.07
NBPF3-201ENST00000318220 PTPRTO14522 1441 aa15.48■□□□□ 0.07
NBPF3-201ENST00000318220 ZFYVE9O95405 1425 aa15.48■□□□□ 0.07
NBPF3-201ENST00000318220 IL6STP40189 918 aaPredicted RBP15.48■□□□□ 0.07
NBPF3-201ENST00000318220 PAG1Q9NWQ8 432 aa15.48■□□□□ 0.07
NBPF3-201ENST00000318220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.48■□□□□ 0.07
NBPF3-201ENST00000318220 NOD1Q9Y239 953 aa15.48■□□□□ 0.07
NBPF3-201ENST00000318220 EZH2Q15910 746 aaKnown RBP15.48■□□□□ 0.07
NBPF3-201ENST00000318220 DBNDD2Q9BQY9 259 aa15.48■□□□□ 0.07
NBPF3-201ENST00000318220 PAGR1Q9BTK6 254 aa15.48■□□□□ 0.07
NBPF3-201ENST00000318220 ATP8B2P98198 1209 aa15.47■□□□□ 0.07
NBPF3-201ENST00000318220 PUM3Q15397 648 aaKnown RBP15.47■□□□□ 0.07
NBPF3-201ENST00000318220 IPO9Q96P70 1041 aaKnown RBP15.47■□□□□ 0.07
NBPF3-201ENST00000318220 NKTRP30414 1462 aaKnown RBP15.47■□□□□ 0.07
NBPF3-201ENST00000318220 MAPKAPK5Q8IW41 473 aa15.47■□□□□ 0.07
NBPF3-201ENST00000318220 IRX3P78415 501 aaPredicted RBP15.47■□□□□ 0.07
NBPF3-201ENST00000318220 CCDC83Q8IWF9 413 aa15.47■□□□□ 0.07
NBPF3-201ENST00000318220 WDR66Q8TBY9 1149 aa15.47■□□□□ 0.07
NBPF3-201ENST00000318220 ESR2Q92731 530 aa15.47■□□□□ 0.07
NBPF3-201ENST00000318220 KINO60870 393 aaKnown RBP15.46■□□□□ 0.07
NBPF3-201ENST00000318220 KIF5BP33176 963 aa15.46■□□□□ 0.07
NBPF3-201ENST00000318220 PPP4R3AQ6IN85 833 aa15.46■□□□□ 0.07
NBPF3-201ENST00000318220 FBXO3Q9UK99 471 aa15.46■□□□□ 0.07
NBPF3-201ENST00000318220 GINS2Q9Y248 185 aa15.46■□□□□ 0.07
NBPF3-201ENST00000318220 RABEP1Q15276 862 aa15.46■□□□□ 0.07
NBPF3-201ENST00000318220 SASS6Q6UVJ0 657 aa15.46■□□□□ 0.07
NBPF3-201ENST00000318220 MPHOSPH6Q99547 160 aaKnown RBP15.46■□□□□ 0.07
NBPF3-201ENST00000318220 JMYQ8N9B5 988 aa15.46■□□□□ 0.07
NBPF3-201ENST00000318220 MBD4O95243 580 aa15.46■□□□□ 0.06
NBPF3-201ENST00000318220 MSNP26038 577 aaKnown RBP15.46■□□□□ 0.06
NBPF3-201ENST00000318220 SUCLG2Q96I99 432 aa15.46■□□□□ 0.06
NBPF3-201ENST00000318220 USP6P35125 1406 aa15.46■□□□□ 0.06
NBPF3-201ENST00000318220 NAP1L1P55209 391 aaKnown RBP15.45■□□□□ 0.06
NBPF3-201ENST00000318220 PROSER3Q2NL68 480 aa15.45■□□□□ 0.06
NBPF3-201ENST00000318220 CCDC93Q567U6 631 aa15.45■□□□□ 0.06
NBPF3-201ENST00000318220 USP48Q86UV5 1035 aa15.45■□□□□ 0.06
NBPF3-201ENST00000318220 TAOK3Q9H2K8 898 aa15.45■□□□□ 0.06
NBPF3-201ENST00000318220 PRDM15P57071 1507 aaPredicted RBP15.45■□□□□ 0.06
NBPF3-201ENST00000318220 ZFYP08048 801 aaPredicted RBP15.45■□□□□ 0.06
NBPF3-201ENST00000318220 NUCB2P80303 420 aa15.45■□□□□ 0.06
NBPF3-201ENST00000318220 WTAPQ15007 396 aa15.45■□□□□ 0.06
NBPF3-201ENST00000318220 IFIT1BQ5T764 474 aaKnown RBP15.45■□□□□ 0.06
NBPF3-201ENST00000318220 CHST3Q7LGC8 479 aa15.45■□□□□ 0.06
NBPF3-201ENST00000318220 VPS72Q15906 364 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 USP40Q9NVE5 1235 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 A0A0G2JLW4 131 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 TNFAIP1Q13829 316 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 GIGYF2Q6Y7W6 1299 aaKnown RBP15.44■□□□□ 0.06
NBPF3-201ENST00000318220 TEKT1Q969V4 418 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 XAGE2Q96GT9 111 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 SEC31BQ9NQW1 1179 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 MAP3K4Q9Y6R4 1608 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 PPEF1O14829 653 aaPredicted RBP15.44■□□□□ 0.06
NBPF3-201ENST00000318220 HOMER2Q9NSB8 354 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 MAP3K15Q6ZN16 1313 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 RPS6KA4O75676 772 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 PTMSP20962 102 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 CNGA1P29973 690 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 ZKSCAN3Q9BRR0 538 aa15.44■□□□□ 0.06
NBPF3-201ENST00000318220 NCOA7Q8NI08 942 aa15.43■□□□□ 0.06
NBPF3-201ENST00000318220 WASF1Q92558 559 aa15.43■□□□□ 0.06
NBPF3-201ENST00000318220 NSMFQ6X4W1 530 aa15.43■□□□□ 0.06
NBPF3-201ENST00000318220 ARHGEF1Q92888 912 aaKnown RBP15.43■□□□□ 0.06
NBPF3-201ENST00000318220 ZNF396Q96N95 335 aaPredicted RBP15.43■□□□□ 0.06
NBPF3-201ENST00000318220 GPR101Q96P66 508 aaPredicted RBP15.43■□□□□ 0.06
NBPF3-201ENST00000318220 PKD2L1Q9P0L9 805 aa15.43■□□□□ 0.06
NBPF3-201ENST00000318220 CTSWP56202 376 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 ARHGAP45Q92619 1136 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 IARSP41252 1262 aaKnown RBP15.42■□□□□ 0.06
NBPF3-201ENST00000318220 MCM2P49736 904 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 CCAR2Q8N163 923 aaKnown RBP15.42■□□□□ 0.06
NBPF3-201ENST00000318220 TGFBRAP1Q8WUH2 860 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.42■□□□□ 0.06
NBPF3-201ENST00000318220 ADCY10Q96PN6 1610 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 HOXB7P09629 217 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 PRKCSHP14314 528 aaPredicted RBP15.42■□□□□ 0.06
NBPF3-201ENST00000318220 CHRNA5P30532 468 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 SMARCC2Q8TAQ2 1214 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 LPIN2Q92539 896 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 SLC26A6Q9BXS9 759 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 ABCC3O15438 1527 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 OLFM4Q6UX06 510 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 HEATR3Q7Z4Q2 680 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 ANKRD44Q8N8A2 993 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 GREM2Q9H772 168 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 EHMT1Q9H9B1 1298 aa15.42■□□□□ 0.06
NBPF3-201ENST00000318220 FCHSD1Q86WN1 690 aa15.41■□□□□ 0.06
NBPF3-201ENST00000318220 C8orf76Q96K31 380 aa15.41■□□□□ 0.06
NBPF3-201ENST00000318220 CHMP5Q9NZZ3 219 aa15.41■□□□□ 0.06
NBPF3-201ENST00000318220 TRIM35Q9UPQ4 493 aa15.41■□□□□ 0.06
NBPF3-201ENST00000318220 BCAMP50895 628 aa15.41■□□□□ 0.06
NBPF3-201ENST00000318220 ARMT1Q9H993 441 aa15.41■□□□□ 0.06
NBPF3-201ENST00000318220 RTN4Q9NQC3 1192 aaKnown RBP15.41■□□□□ 0.06
NBPF3-201ENST00000318220 MAST3O60307 1309 aa15.41■□□□□ 0.06
NBPF3-201ENST00000318220 BRF1Q92994 677 aa15.41■□□□□ 0.06
NBPF3-201ENST00000318220 GPBP1L1Q9HC44 474 aaPredicted RBP15.41■□□□□ 0.06
NBPF3-201ENST00000318220 GPCPD1Q9NPB8 672 aa15.41■□□□□ 0.06
NBPF3-201ENST00000318220 NEURL1BA8MQ27 555 aa15.4■□□□□ 0.06
NBPF3-201ENST00000318220 IDEP14735 1019 aa15.4■□□□□ 0.06
NBPF3-201ENST00000318220 ATP2B4P23634 1241 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms