RNA–Protein interactions for RNA: ENST00000312349.4

FNDC9-201, Transcript of fibronectin type III domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC9, Length 2,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9-201ENST00000312349 SYT1P21579 422 aa13.78□□□□□ -0.2
FNDC9-201ENST00000312349 TOB2Q14106 344 aaPredicted RBP13.78□□□□□ -0.2
FNDC9-201ENST00000312349 MCMDC2Q4G0Z9 681 aa13.78□□□□□ -0.2
FNDC9-201ENST00000312349 INTS5Q6P9B9 1019 aaKnown RBP13.78□□□□□ -0.2
FNDC9-201ENST00000312349 DZIP3Q86Y13 1208 aaKnown RBP13.78□□□□□ -0.2
FNDC9-201ENST00000312349 PALLDQ8WX93 1383 aa13.78□□□□□ -0.2
FNDC9-201ENST00000312349 KCNQ2O43526 872 aa13.77□□□□□ -0.21
FNDC9-201ENST00000312349 CYP21A2P08686 494 aa13.77□□□□□ -0.21
FNDC9-201ENST00000312349 IFIT1P09914 478 aaKnown RBP13.77□□□□□ -0.21
FNDC9-201ENST00000312349 PTMSP20962 102 aa13.77□□□□□ -0.21
FNDC9-201ENST00000312349 ITGA6P23229 1130 aa13.77□□□□□ -0.21
FNDC9-201ENST00000312349 IFIT5Q13325 482 aaKnown RBP13.77□□□□□ -0.21
FNDC9-201ENST00000312349 ITPK1Q13572 414 aa13.77□□□□□ -0.21
FNDC9-201ENST00000312349 XAGE2Q96GT9 111 aa13.77□□□□□ -0.21
FNDC9-201ENST00000312349 CEP126Q9P2H0 1117 aa13.77□□□□□ -0.21
FNDC9-201ENST00000312349 RFX7Q2KHR2 1363 aa13.76□□□□□ -0.21
FNDC9-201ENST00000312349 SPATA31A5Q5VU36 1347 aa13.76□□□□□ -0.21
FNDC9-201ENST00000312349 SPATA31A7Q8IWB4 1347 aa13.76□□□□□ -0.21
FNDC9-201ENST00000312349 RPS6KB1P23443 525 aa13.76□□□□□ -0.21
FNDC9-201ENST00000312349 STOX1Q6ZVD7 989 aa13.76□□□□□ -0.21
FNDC9-201ENST00000312349 FAM43AQ8N2R8 423 aa13.76□□□□□ -0.21
FNDC9-201ENST00000312349 TRMT112Q9UI30 125 aaKnown RBP13.76□□□□□ -0.21
FNDC9-201ENST00000312349 MYO5AQ9Y4I1 1855 aaKnown RBP13.76□□□□□ -0.21
FNDC9-201ENST00000312349 SH3TC1Q8TE82 1336 aa13.76□□□□□ -0.21
FNDC9-201ENST00000312349 CDHR2Q9BYE9 1310 aa13.76□□□□□ -0.21
FNDC9-201ENST00000312349 FAM177BA6PVY3 158 aa13.76□□□□□ -0.21
FNDC9-201ENST00000312349 IRS4O14654 1257 aaPredicted RBP13.76□□□□□ -0.21
FNDC9-201ENST00000312349 GJB2P29033 226 aa13.76□□□□□ -0.21
FNDC9-201ENST00000312349 CTSWP56202 376 aa13.76□□□□□ -0.21
FNDC9-201ENST00000312349 FKBP4Q02790 459 aaKnown RBP eCLIP13.76□□□□□ -0.21
FNDC9-201ENST00000312349 ZSCAN23Q3MJ62 389 aa13.76□□□□□ -0.21
FNDC9-201ENST00000312349 RIPOR2Q9Y4F9 1068 aa13.76□□□□□ -0.21
FNDC9-201ENST00000312349 M0R2C6 588 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 GADD45BO75293 160 aaPredicted RBP13.75□□□□□ -0.21
FNDC9-201ENST00000312349 CRKLP46109 303 aaKnown RBP13.75□□□□□ -0.21
FNDC9-201ENST00000312349 HSP90AB3PQ58FF7 597 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 TAF7LQ5H9L4 462 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 BLOC1S2Q6QNY1 142 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 TMEM63CQ9P1W3 806 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 SMC3Q9UQE7 1217 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 AKAP11Q9UKA4 1901 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 MAST3O60307 1309 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 STX6O43752 255 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 ATP6V1AP38606 617 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 IL6STP40189 918 aaPredicted RBP13.75□□□□□ -0.21
FNDC9-201ENST00000312349 MRE11P49959 708 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 EIF5P55010 431 aaKnown RBP13.75□□□□□ -0.21
FNDC9-201ENST00000312349 KCNQ4P56696 695 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 TSGA10IPQ3SY00 556 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 ZMYM1Q5SVZ6 1142 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 RNF20Q5VTR2 975 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 LRRC2Q9BYS8 371 aa13.75□□□□□ -0.21
FNDC9-201ENST00000312349 WDR33Q9C0J8 1336 aaKnown RBP13.74□□□□□ -0.21
FNDC9-201ENST00000312349 STK3Q13188 491 aa13.74□□□□□ -0.21
FNDC9-201ENST00000312349 PTF1AQ7RTS3 328 aa13.74□□□□□ -0.21
FNDC9-201ENST00000312349 ZNF34Q8IZ26 560 aa13.74□□□□□ -0.21
FNDC9-201ENST00000312349 CNPY2Q9Y2B0 182 aa13.74□□□□□ -0.21
FNDC9-201ENST00000312349 COL4A1P02462 1669 aa13.74□□□□□ -0.21
FNDC9-201ENST00000312349 LOC102724428A0A0B4J2F2 783 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 FOXP2O15409 715 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 ZSCAN22P10073 491 aaPredicted RBP13.73□□□□□ -0.21
FNDC9-201ENST00000312349 HCLS1P14317 486 aaPredicted RBP13.73□□□□□ -0.21
FNDC9-201ENST00000312349 PSMA5P28066 241 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 SIK1P57059 783 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 SUSD4Q5VX71 490 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 LDHAL6AQ6ZMR3 332 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 VGLL2Q8N8G2 317 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 OSBP2Q969R2 916 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.73□□□□□ -0.21
FNDC9-201ENST00000312349 EP400Q96L91 3159 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 NWD2Q9ULI1 1742 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 SPEF2Q9C093 1822 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 SNAP23O00161 211 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 ZAP70P43403 619 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 TPRNQ4KMQ1 711 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 METTL24Q5JXM2 366 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 TTC39AQ5SRH9 613 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 TTLL5Q6EMB2 1281 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 SMIM5Q71RC9 77 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 USP48Q86UV5 1035 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 SH2B1Q9NRF2 756 aaPredicted RBP13.73□□□□□ -0.21
FNDC9-201ENST00000312349 CCDC87Q9NVE4 849 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 HMG20BQ9P0W2 317 aa13.73□□□□□ -0.21
FNDC9-201ENST00000312349 ERVV-1B6SEH8 477 aa13.72□□□□□ -0.21
FNDC9-201ENST00000312349 RNF113AO15541 343 aaKnown RBP13.72□□□□□ -0.21
FNDC9-201ENST00000312349 HSPD1P10809 573 aaKnown RBP13.72□□□□□ -0.21
FNDC9-201ENST00000312349 GORABQ5T7V8 394 aa13.72□□□□□ -0.21
FNDC9-201ENST00000312349 HELBQ8NG08 1087 aaPredicted RBP13.72□□□□□ -0.21
FNDC9-201ENST00000312349 ZSCAN31Q96LW9 406 aaPredicted RBP13.72□□□□□ -0.21
FNDC9-201ENST00000312349 MTMR6Q9Y217 621 aa13.72□□□□□ -0.21
FNDC9-201ENST00000312349 THRAP3Q9Y2W1 955 aaKnown RBP13.72□□□□□ -0.21
FNDC9-201ENST00000312349 MYH7P12883 1935 aa13.72□□□□□ -0.21
FNDC9-201ENST00000312349 MCAMP43121 646 aa13.72□□□□□ -0.21
FNDC9-201ENST00000312349 ATP2B3Q16720 1220 aa13.72□□□□□ -0.21
FNDC9-201ENST00000312349 FAM98CQ17RN3 349 aaKnown RBP13.72□□□□□ -0.21
FNDC9-201ENST00000312349 NEK1Q96PY6 1258 aa13.72□□□□□ -0.21
FNDC9-201ENST00000312349 CDCA7Q9BWT1 371 aaPredicted RBP13.72□□□□□ -0.21
FNDC9-201ENST00000312349 HELLSQ9NRZ9 838 aa13.72□□□□□ -0.21
FNDC9-201ENST00000312349 U3KPZ7 1027 aaPredicted RBP13.72□□□□□ -0.21
FNDC9-201ENST00000312349 RREB1Q92766 1687 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms