RNA–Protein interactions for RNA: ENST00000310833.11

CD34-201, Transcript of CD34 molecule, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CD34, Length 8,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD34-201ENST00000310833 CAMSAP2Q08AD1 1489 aa12.68□□□□□ -0.38
CD34-201ENST00000310833 MYO1BO43795 1136 aa12.68□□□□□ -0.38
CD34-201ENST00000310833 IARSP41252 1262 aaKnown RBP12.68□□□□□ -0.38
CD34-201ENST00000310833 CCDC62Q6P9F0 684 aa12.68□□□□□ -0.38
CD34-201ENST00000310833 IFIT5Q13325 482 aaKnown RBP12.68□□□□□ -0.38
CD34-201ENST00000310833 SEC62Q99442 399 aaKnown RBP12.68□□□□□ -0.38
CD34-201ENST00000310833 GGNBP2Q9H3C7 697 aa12.68□□□□□ -0.38
CD34-201ENST00000310833 EIF3DO15371 548 aaKnown RBP eCLIP12.68□□□□□ -0.38
CD34-201ENST00000310833 NEDD9Q14511 834 aa12.68□□□□□ -0.38
CD34-201ENST00000310833 PUS7Q96PZ0 661 aaKnown RBP12.68□□□□□ -0.38
CD34-201ENST00000310833 NAP1L4Q99733 375 aaKnown RBP12.68□□□□□ -0.38
CD34-201ENST00000310833 TEX13AQ9BXU3 409 aaPredicted RBP12.68□□□□□ -0.38
CD34-201ENST00000310833 CALCOCO2Q13137 446 aa12.68□□□□□ -0.38
CD34-201ENST00000310833 C9orf84Q5VXU9 1444 aa12.67□□□□□ -0.38
CD34-201ENST00000310833 IFIT3O14879 490 aaKnown RBP12.67□□□□□ -0.38
CD34-201ENST00000310833 KIFAP3Q92845 792 aa12.67□□□□□ -0.38
CD34-201ENST00000310833 RUFY4Q6ZNE9 571 aa12.67□□□□□ -0.38
CD34-201ENST00000310833 FAN1Q9Y2M0 1017 aa12.67□□□□□ -0.38
CD34-201ENST00000310833 BUB1BO60566 1050 aaPredicted RBP12.67□□□□□ -0.38
CD34-201ENST00000310833 NCOA7Q8NI08 942 aa12.67□□□□□ -0.38
CD34-201ENST00000310833 TIAM1Q13009 1591 aa12.67□□□□□ -0.38
CD34-201ENST00000310833 GOLGA8AA7E2F4 631 aa12.67□□□□□ -0.38
CD34-201ENST00000310833 STK10O94804 968 aaKnown RBP12.67□□□□□ -0.38
CD34-201ENST00000310833 PPP2R5EQ16537 467 aa12.67□□□□□ -0.38
CD34-201ENST00000310833 C1orf115Q9H7X2 142 aa12.67□□□□□ -0.38
CD34-201ENST00000310833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.67□□□□□ -0.38
CD34-201ENST00000310833 THEMISQ8N1K5 641 aaPredicted RBP12.66□□□□□ -0.38
CD34-201ENST00000310833 EPSTI1Q96J88 318 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 MAK16Q9BXY0 300 aaKnown RBP12.66□□□□□ -0.38
CD34-201ENST00000310833 Q9H521 79 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 GIPC1O14908 333 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 GOLGA8QA0A0J9YX86 632 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 GOLGA8OA6NCC3 632 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 GOLGA8NF8WBI6 632 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 ARL1P40616 181 aaPredicted RBP12.66□□□□□ -0.38
CD34-201ENST00000310833 SEPT14Q6ZU15 432 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 TRMT1Q9NXH9 659 aaKnown RBP12.66□□□□□ -0.38
CD34-201ENST00000310833 LUC7L3O95232 432 aaKnown RBP12.66□□□□□ -0.38
CD34-201ENST00000310833 SATB1Q01826 763 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 SMAP1Q8IYB5 467 aaPredicted RBP12.66□□□□□ -0.38
CD34-201ENST00000310833 KAT14Q9H8E8 782 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 LGSNQ5TDP6 509 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 SULT6B1Q6IMI4 303 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 ZPR1O75312 459 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 CALM1P0DP23 149 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 CALM2P0DP24 149 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 CALM3P0DP25 149 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 METAP2P50579 478 aaKnown RBP eCLIP12.66□□□□□ -0.38
CD34-201ENST00000310833 MCM6Q14566 821 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 MFSD6Q6ZSS7 791 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.66□□□□□ -0.38
CD34-201ENST00000310833 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
CD34-201ENST00000310833 RALGAPBQ86X10 1494 aa12.65□□□□□ -0.38
CD34-201ENST00000310833 TSKSQ9UJT2 592 aa12.65□□□□□ -0.38
CD34-201ENST00000310833 FAM169AQ9Y6X4 670 aa12.65□□□□□ -0.38
CD34-201ENST00000310833 CCDC117Q8IWD4 279 aaPredicted RBP12.65□□□□□ -0.38
CD34-201ENST00000310833 TACC3Q9Y6A5 838 aa12.65□□□□□ -0.38
CD34-201ENST00000310833 HOXA7P31268 230 aaPredicted RBP12.65□□□□□ -0.38
CD34-201ENST00000310833 RILPL1Q5EBL4 403 aa12.65□□□□□ -0.38
CD34-201ENST00000310833 EIF2AQ9BY44 585 aaKnown RBP12.65□□□□□ -0.38
CD34-201ENST00000310833 UTP11Q9Y3A2 253 aaKnown RBP12.65□□□□□ -0.38
CD34-201ENST00000310833 LRPPRCP42704 1394 aaKnown RBP12.65□□□□□ -0.38
CD34-201ENST00000310833 PCK1P35558 622 aa12.65□□□□□ -0.38
CD34-201ENST00000310833 INF2Q27J81 1249 aa12.65□□□□□ -0.38
CD34-201ENST00000310833 ZNF365Q70YC5 407 aa12.65□□□□□ -0.38
CD34-201ENST00000310833 TNPO1Q92973 898 aaKnown RBP12.65□□□□□ -0.38
CD34-201ENST00000310833 SKILP12757 684 aa12.65□□□□□ -0.39
CD34-201ENST00000310833 RPL13P26373 211 aaKnown RBP12.65□□□□□ -0.39
CD34-201ENST00000310833 CETN3O15182 167 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 XPCQ01831 940 aaPredicted RBP12.64□□□□□ -0.39
CD34-201ENST00000310833 NOLC1Q14978 699 aaKnown RBP eCLIP12.64□□□□□ -0.39
CD34-201ENST00000310833 NAA25Q14CX7 972 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 SEL1L2Q5TEA6 688 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 NEK11Q8NG66 645 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 TRIM35Q9UPQ4 493 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 CDC5LQ99459 802 aaKnown RBP12.64□□□□□ -0.39
CD34-201ENST00000310833 PUF60Q9UHX1 559 aaKnown RBP12.64□□□□□ -0.39
CD34-201ENST00000310833 NBPF8Q3BBV2 869 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 RTL9Q8NET4 1388 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 MINDY4BA8MYZ0 360 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 TMEM67Q5HYA8 995 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 CCDC42Q96M95 316 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 PARP2Q9UGN5 583 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 SH3BP5O60239 455 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 ABCF2Q9UG63 623 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 GABPB1Q06547 395 aaPredicted RBP12.64□□□□□ -0.39
CD34-201ENST00000310833 CEP85LQ5SZL2 805 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 TOM1L2Q6ZVM7 507 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 ATP2A3Q93084 1043 aa12.64□□□□□ -0.39
CD34-201ENST00000310833 LARSQ9P2J5 1176 aaKnown RBP12.64□□□□□ -0.39
CD34-201ENST00000310833 MTMR3Q13615 1198 aa12.63□□□□□ -0.39
CD34-201ENST00000310833 IFT20Q8IY31 132 aa12.63□□□□□ -0.39
CD34-201ENST00000310833 UBL4BQ8N7F7 174 aa12.63□□□□□ -0.39
CD34-201ENST00000310833 RPGRIP1Q96KN7 1286 aa12.63□□□□□ -0.39
CD34-201ENST00000310833 PRPF40BQ6NWY9 871 aaKnown RBP12.63□□□□□ -0.39
CD34-201ENST00000310833 PTPN23Q9H3S7 1636 aa12.63□□□□□ -0.39
CD34-201ENST00000310833 MYL6BP14649 208 aa12.63□□□□□ -0.39
CD34-201ENST00000310833 TERF1P54274 439 aa12.63□□□□□ -0.39
CD34-201ENST00000310833 PPP1R7Q15435 360 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms