RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 KRT2P35908 639 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 DHX9Q08211 1270 aaKnown RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 NFE2L2Q16236 605 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 TCF24Q7RTU0 167 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 ZBTB3Q9H5J0 574 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 CABP2Q9NPB3 220 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 PPME1Q9Y570 386 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 SUPT16HQ9Y5B9 1047 aaKnown RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 PRXQ9BXM0 1461 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 SHTN1A0MZ66 631 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 PEX11BO96011 259 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 ATP1A4Q13733 1029 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 CCBE1Q6UXH8 406 aaPredicted RBP1.59□□□□□ -2.15
CEP290-201ENST00000309041 GCNT7Q6ZNI0 430 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 UPF1Q92900 1129 aaKnown RBP eCLIP1.59□□□□□ -2.15
CEP290-201ENST00000309041 KIAA1468Q9P260 1216 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 ABCF2Q9UG63 623 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 CROCC2H7BZ55 1655 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 AFDNP55196 1824 aaKnown RBP1.59□□□□□ -2.15
CEP290-201ENST00000309041 A0A0G2JPF8 293 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 SPDYE3A6NKU9 549 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 HNRNPCL2B2RXH8 293 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 HNRNPCL3B7ZW38 293 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 ALG1L2C9J202 215 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 HNRNPCL1O60812 293 aaKnown RBP1.59□□□□□ -2.15
CEP290-201ENST00000309041 SOAT2O75908 522 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 CHGBP05060 677 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 HNRNPCL4P0DMR1 293 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 HDAC1Q13547 482 aaPredicted RBP1.59□□□□□ -2.15
CEP290-201ENST00000309041 UBE4AQ14139 1066 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 ALG1LQ6GMV1 187 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 CASC1Q6TDU7 716 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 METTL16Q86W50 562 aaKnown RBP1.59□□□□□ -2.15
CEP290-201ENST00000309041 LURAP1LQ8IV03 231 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 C19orf47Q8N9M1 422 aaKnown RBP1.59□□□□□ -2.15
CEP290-201ENST00000309041 SMARCC1Q92922 1105 aaPredicted RBP1.59□□□□□ -2.15
CEP290-201ENST00000309041 ABHD17AQ96GS6 310 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 RBM12Q9NTZ6 932 aaKnown RBP1.59□□□□□ -2.15
CEP290-201ENST00000309041 MKRN1Q9UHC7 482 aaKnown RBP1.59□□□□□ -2.15
CEP290-201ENST00000309041 CHAF1AQ13111 956 aaPredicted RBP1.59□□□□□ -2.15
CEP290-201ENST00000309041 PLAC9Q5JTB6 97 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 OLFM4Q6UX06 510 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 EXOC3L1Q86VI1 746 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 NGEFQ8N5V2 710 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 WNT8BQ93098 351 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 RBSNQ9H1K0 784 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 IL20Q9NYY1 176 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 WWC3Q9ULE0 1092 aa1.59□□□□□ -2.15
CEP290-201ENST00000309041 BRD4O60885 1362 aaPredicted RBP1.59□□□□□ -2.16
CEP290-201ENST00000309041 AKNAQ7Z591 1439 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 SFPQP23246 707 aaKnown RBP eCLIP1.59□□□□□ -2.16
CEP290-201ENST00000309041 TAP1Q03518 808 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 TAF7Q15545 349 aaPredicted RBP1.59□□□□□ -2.16
CEP290-201ENST00000309041 CRTC2Q53ET0 693 aaPredicted RBP1.59□□□□□ -2.16
CEP290-201ENST00000309041 NPAS3Q8IXF0 933 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 ENAHQ8N8S7 591 aaPredicted RBP1.59□□□□□ -2.16
CEP290-201ENST00000309041 CACTINQ8WUQ7 758 aaKnown RBP1.59□□□□□ -2.16
CEP290-201ENST00000309041 DMRTB1Q96MA1 342 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 TRIM7Q9C029 511 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 PRR12Q9ULL5 1215 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 MRPL42Q9Y6G3 142 aaKnown RBP1.59□□□□□ -2.16
CEP290-201ENST00000309041 IQCA1LA6NCM1 817 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 CCNE1P24864 410 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 PSMA6P60900 246 aaKnown RBP1.59□□□□□ -2.16
CEP290-201ENST00000309041 VAMP2P63027 116 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 OCRLQ01968 901 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 MLLT1Q03111 559 aaPredicted RBP1.59□□□□□ -2.16
CEP290-201ENST00000309041 FAM50AQ14320 339 aaKnown RBP1.59□□□□□ -2.16
CEP290-201ENST00000309041 CFAP70Q5T0N1 1121 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 LHX8Q68G74 356 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 MPRIPQ6WCQ1 1025 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 BRSK2Q8IWQ3 736 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 PIP4P2Q8N4L2 257 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 RBM46Q8TBY0 533 aaKnown RBP1.59□□□□□ -2.16
CEP290-201ENST00000309041 SGSM3Q96HU1 749 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 FNDC3AQ9Y2H6 1198 aaKnown RBP1.59□□□□□ -2.16
CEP290-201ENST00000309041 PITPNM2Q9BZ72 1349 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 INO80Q9ULG1 1556 aaPredicted RBP1.59□□□□□ -2.16
CEP290-201ENST00000309041 LOC100509620A0A075B734 347 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 WNT1P04628 370 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 POLA2Q14181 598 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 HVCN1Q96D96 273 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 ALG2Q9H553 416 aa1.59□□□□□ -2.16
CEP290-201ENST00000309041 EME2A4GXA9 379 aaPredicted RBP1.58□□□□□ -2.16
CEP290-201ENST00000309041 BTBD11A6QL63 1104 aa1.58□□□□□ -2.16
CEP290-201ENST00000309041 TRIM16O95361 564 aa1.58□□□□□ -2.16
CEP290-201ENST00000309041 TBC1D8O95759 1140 aa1.58□□□□□ -2.16
CEP290-201ENST00000309041 CDH2P19022 906 aaPredicted RBP1.58□□□□□ -2.16
CEP290-201ENST00000309041 EZH2Q15910 746 aaKnown RBP1.58□□□□□ -2.16
CEP290-201ENST00000309041 RNF148Q8N7C7 305 aa1.58□□□□□ -2.16
CEP290-201ENST00000309041 ZSWIM2Q8NEG5 633 aa1.58□□□□□ -2.16
CEP290-201ENST00000309041 LPPQ93052 612 aa1.58□□□□□ -2.16
CEP290-201ENST00000309041 RANBP17Q9H2T7 1088 aaKnown RBP1.58□□□□□ -2.16
CEP290-201ENST00000309041 INTS7Q9NVH2 962 aaKnown RBP1.58□□□□□ -2.16
CEP290-201ENST00000309041 SWAP70Q9UH65 585 aa1.58□□□□□ -2.16
CEP290-201ENST00000309041 TEKT2Q9UIF3 430 aa1.58□□□□□ -2.16
CEP290-201ENST00000309041 ZNF142P52746 1687 aaPredicted RBP1.58□□□□□ -2.16
CEP290-201ENST00000309041 LAMB1P07942 1786 aa1.58□□□□□ -2.16
CEP290-201ENST00000309041 TRBV23OR9-2A0A075B6M9 112 aa1.58□□□□□ -2.16
CEP290-201ENST00000309041 FMNL1O95466 1100 aaPredicted RBP1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms