RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 KRT18P05783 430 aaKnown RBP13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 EPS15P42566 896 aa13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 ZNF594Q96JF6 807 aaPredicted RBP13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 FAM227BQ96M60 508 aa13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 KRT23Q9C075 422 aa13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 BCL11BQ9C0K0 894 aaPredicted RBP13.28□□□□□ -0.28
PCDHGC3-201ENST00000308177 PRC1O43663 620 aa13.27□□□□□ -0.28
PCDHGC3-201ENST00000308177 DNM1Q05193 864 aaKnown RBP13.27□□□□□ -0.28
PCDHGC3-201ENST00000308177 SLC26A6Q9BXS9 759 aa13.27□□□□□ -0.28
PCDHGC3-201ENST00000308177 SH3TC1Q8TE82 1336 aa13.27□□□□□ -0.28
PCDHGC3-201ENST00000308177 PDE4BQ07343 736 aa13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 LRSAM1Q6UWE0 723 aa13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 QRICH2Q9H0J4 1663 aa13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 DIP2CQ9Y2E4 1556 aa13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 TSPY2A6NKD2 308 aa13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 ITGA6P23229 1130 aa13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 PRIM1P49642 420 aaKnown RBP13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 WTAPQ15007 396 aa13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 CNNM2Q9H8M5 875 aa13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 HELLSQ9NRZ9 838 aa13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 SNX14Q9Y5W7 946 aa13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 TPTE2Q6XPS3 522 aa13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 PPFIBP1Q86W92 1011 aa13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 CRNKL1Q9BZJ0 848 aaKnown RBP13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 SEC63Q9UGP8 760 aaKnown RBP13.27□□□□□ -0.29
PCDHGC3-201ENST00000308177 ANKARQ7Z5J8 1434 aa13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 OFD1O75665 1012 aa13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 XRCC6P12956 609 aaKnown RBP eCLIP13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 CHST3Q7LGC8 479 aa13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 PNPLA6Q8IY17 1366 aa13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 IBTKQ9P2D0 1353 aaPredicted RBP13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 PRKCSHP14314 528 aaPredicted RBP13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 ERBB3P21860 1342 aa13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 MPHOSPH10O00566 681 aaKnown RBP13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 SYT1P21579 422 aa13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 NAA16Q6N069 864 aaPredicted RBP13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 GIMAP6Q6P9H5 292 aa13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 CAMSAP1Q5T5Y3 1602 aa13.26□□□□□ -0.29
PCDHGC3-201ENST00000308177 HCLS1P14317 486 aaPredicted RBP13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 NAP1L1P55209 391 aaKnown RBP13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 PROSER3Q2NL68 480 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 CFAP100Q494V2 611 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 TMTC2Q8N394 836 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 CRACR2BQ8N4Y2 399 aaPredicted RBP13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 ESR2Q92731 530 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 NYXQ9GZU5 481 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 TULP4Q9NRJ4 1543 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 NLRP5P59047 1200 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 CCDC129Q6ZRS4 1044 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 RTCBQ9Y3I0 505 aaKnown RBP13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 SLC27A2O14975 620 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 APOBRQ0VD83 1088 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 GPS2Q13227 327 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 TTLL5Q6EMB2 1281 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 KBTBD3Q8NAB2 608 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 ZNF165P49910 485 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 PARP10Q53GL7 1025 aa13.25□□□□□ -0.29
PCDHGC3-201ENST00000308177 EPB41L2O43491 1005 aaKnown RBP13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 PDE8AO60658 829 aa13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 KIF5BP33176 963 aa13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 PDE4CQ08493 712 aa13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 CNNM3Q8NE01 707 aa13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 XAGE2Q96GT9 111 aa13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 ALG1Q9BT22 464 aa13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 ARGLU1Q9NWB6 273 aaPredicted RBP13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 HSPA4P34932 840 aa13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 SIRT2Q8IXJ6 389 aa13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 EAF2Q96CJ1 260 aaPredicted RBP13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 MED14O60244 1454 aa13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 ST5P78524 1137 aa13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 TCIRG1Q13488 830 aa13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 MAGEB6Q8N7X4 407 aa13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 NDUFB9Q9Y6M9 179 aa13.24□□□□□ -0.29
PCDHGC3-201ENST00000308177 ERBB4Q15303 1308 aa13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 CCDC194A0A1B0GVG4 234 aa13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 SSBP05455 408 aaKnown RBP eCLIP13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 RPS6KB1P23443 525 aa13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 TTLL7Q6ZT98 887 aa13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 ZHX3Q9H4I2 956 aa13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 BMP2KQ9NSY1 1161 aaPredicted RBP13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 KIDINS220Q9ULH0 1771 aa13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 GNAT2P19087 354 aa13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 UVSSAQ2YD98 709 aa13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 ATP5JP18859 108 aa13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 RTN1Q16799 776 aa13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 KAT14Q9H8E8 782 aa13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
PCDHGC3-201ENST00000308177 CAVIN2O95810 425 aa13.22□□□□□ -0.29
PCDHGC3-201ENST00000308177 STX1AQ16623 288 aa13.22□□□□□ -0.29
PCDHGC3-201ENST00000308177 SLC4A8Q2Y0W8 1093 aa13.22□□□□□ -0.29
PCDHGC3-201ENST00000308177 ZNHIT6Q9NWK9 470 aaKnown RBP13.22□□□□□ -0.29
PCDHGC3-201ENST00000308177 ADCY5O95622 1261 aa13.22□□□□□ -0.29
PCDHGC3-201ENST00000308177 MIGA1Q8NAN2 632 aa13.22□□□□□ -0.29
PCDHGC3-201ENST00000308177 PANK2Q9BZ23 570 aa13.22□□□□□ -0.29
PCDHGC3-201ENST00000308177 DACT1Q9NYF0 836 aa13.22□□□□□ -0.29
PCDHGC3-201ENST00000308177 PTPDC1A2A3K4 754 aa13.22□□□□□ -0.29
PCDHGC3-201ENST00000308177 BIN1O00499 593 aa13.22□□□□□ -0.29
PCDHGC3-201ENST00000308177 GSTO1P78417 241 aa13.22□□□□□ -0.29
PCDHGC3-201ENST00000308177 CCDC112Q8NEF3 446 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms