RNA–Protein interactions for RNA: ENST00000308091.8

RAPH1-201, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPH1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-201ENST00000308091 NLRP2Q9NX02 1062 aa21.93■■□□□ 1.1
RAPH1-201ENST00000308091 HMG20BQ9P0W2 317 aa21.93■■□□□ 1.1
RAPH1-201ENST00000308091 CYP21A2P08686 494 aa21.93■■□□□ 1.1
RAPH1-201ENST00000308091 NPHP3Q7Z494 1330 aa21.92■■□□□ 1.1
RAPH1-201ENST00000308091 ZNF609O15014 1411 aa21.92■■□□□ 1.1
RAPH1-201ENST00000308091 RFX5P48382 616 aaPredicted RBP21.92■■□□□ 1.1
RAPH1-201ENST00000308091 ANKRD13DQ6ZTN6 518 aa21.92■■□□□ 1.1
RAPH1-201ENST00000308091 SLC52A2Q9HAB3 445 aa21.92■■□□□ 1.1
RAPH1-201ENST00000308091 NAP1L2Q9ULW6 460 aaPredicted RBP21.92■■□□□ 1.1
RAPH1-201ENST00000308091 CTIFO43310 598 aaKnown RBP21.92■■□□□ 1.1
RAPH1-201ENST00000308091 DNAJC25Q9H1X3 360 aa21.92■■□□□ 1.1
RAPH1-201ENST00000308091 ATP5JP18859 108 aa21.91■■□□□ 1.1
RAPH1-201ENST00000308091 USPL1Q5W0Q7 1092 aa21.91■■□□□ 1.1
RAPH1-201ENST00000308091 CCDC186Q7Z3E2 898 aa21.91■■□□□ 1.1
RAPH1-201ENST00000308091 FTOQ9C0B1 505 aaKnown RBP eCLIP21.91■■□□□ 1.1
RAPH1-201ENST00000308091 OGFRQ9NZT2 677 aa21.91■■□□□ 1.1
RAPH1-201ENST00000308091 JCADQ9P266 1359 aa21.91■■□□□ 1.1
RAPH1-201ENST00000308091 OVOS2A0A0G2JMS6 1433 aa21.91■■□□□ 1.1
RAPH1-201ENST00000308091 CHD2O14647 1828 aaKnown RBP21.91■■□□□ 1.1
RAPH1-201ENST00000308091 ERBB3P21860 1342 aa21.91■■□□□ 1.1
RAPH1-201ENST00000308091 TSGA10IPQ3SY00 556 aa21.91■■□□□ 1.1
RAPH1-201ENST00000308091 RAPGEF4Q8WZA2 1011 aa21.91■■□□□ 1.1
RAPH1-201ENST00000308091 TRERF1Q96PN7 1200 aa21.91■■□□□ 1.1
RAPH1-201ENST00000308091 CLSTN2Q9H4D0 955 aa21.91■■□□□ 1.1
RAPH1-201ENST00000308091 COPRSQ9NQ92 184 aa21.91■■□□□ 1.1
RAPH1-201ENST00000308091 CTNNA3Q9UI47 895 aa21.91■■□□□ 1.1
RAPH1-201ENST00000308091 H3BQV1 296 aa21.9■■□□□ 1.1
RAPH1-201ENST00000308091 IFFO2Q5TF58 517 aa21.9■■□□□ 1.1
RAPH1-201ENST00000308091 KDM6AO15550 1401 aaPredicted RBP21.9■■□□□ 1.1
RAPH1-201ENST00000308091 RESTQ13127 1097 aa21.9■■□□□ 1.1
RAPH1-201ENST00000308091 ALDH8A1Q9H2A2 487 aaPredicted RBP21.9■■□□□ 1.1
RAPH1-201ENST00000308091 GOLGA6L6A8MZA4 724 aa21.89■■□□□ 1.1
RAPH1-201ENST00000308091 STOX1Q6ZVD7 989 aa21.89■■□□□ 1.1
RAPH1-201ENST00000308091 TRIM5Q9C035 493 aa21.89■■□□□ 1.1
RAPH1-201ENST00000308091 A0A0G2JLW4 131 aa21.89■■□□□ 1.09
RAPH1-201ENST00000308091 NPHP1O15259 732 aa21.89■■□□□ 1.09
RAPH1-201ENST00000308091 SCRN1Q12765 414 aa21.89■■□□□ 1.09
RAPH1-201ENST00000308091 ST7Q9NRC1 585 aa21.89■■□□□ 1.09
RAPH1-201ENST00000308091 DDX19AQ9NUU7 478 aaKnown RBP21.89■■□□□ 1.09
RAPH1-201ENST00000308091 KRT28Q7Z3Y7 464 aa21.88■■□□□ 1.09
RAPH1-201ENST00000308091 A0A087WWV3 80 aa21.88■■□□□ 1.09
RAPH1-201ENST00000308091 A0A087WZG4 1122 aa21.88■■□□□ 1.09
RAPH1-201ENST00000308091 TNNT1P13805 278 aa21.88■■□□□ 1.09
RAPH1-201ENST00000308091 LRP10Q7Z4F1 713 aa21.88■■□□□ 1.09
RAPH1-201ENST00000308091 PHRF1Q9P1Y6 1649 aaKnown RBP21.88■■□□□ 1.09
RAPH1-201ENST00000308091 CDK11BP21127 795 aaKnown RBP21.87■■□□□ 1.09
RAPH1-201ENST00000308091 ZNF165P49910 485 aa21.87■■□□□ 1.09
RAPH1-201ENST00000308091 KRT32Q14532 448 aa21.87■■□□□ 1.09
RAPH1-201ENST00000308091 C5P01031 1676 aa21.87■■□□□ 1.09
RAPH1-201ENST00000308091 SLFN14P0C7P3 912 aa21.87■■□□□ 1.09
RAPH1-201ENST00000308091 PHKG2P15735 406 aa21.87■■□□□ 1.09
RAPH1-201ENST00000308091 MCMDC2Q4G0Z9 681 aa21.87■■□□□ 1.09
RAPH1-201ENST00000308091 FEZ1Q99689 392 aa21.87■■□□□ 1.09
RAPH1-201ENST00000308091 SIPA1L3O60292 1781 aaPredicted RBP21.86■■□□□ 1.09
RAPH1-201ENST00000308091 PDIA4P13667 645 aaKnown RBP21.86■■□□□ 1.09
RAPH1-201ENST00000308091 CCT2P78371 535 aaKnown RBP21.86■■□□□ 1.09
RAPH1-201ENST00000308091 DDX17Q92841 729 aaKnown RBP21.86■■□□□ 1.09
RAPH1-201ENST00000308091 U3KPZ7 1027 aaPredicted RBP21.86■■□□□ 1.09
RAPH1-201ENST00000308091 MRC1P22897 1456 aa21.86■■□□□ 1.09
RAPH1-201ENST00000308091 TPM3P06753 285 aa21.85■■□□□ 1.09
RAPH1-201ENST00000308091 ZNF75DP51815 510 aa21.85■■□□□ 1.09
RAPH1-201ENST00000308091 APOBRQ0VD83 1088 aa21.85■■□□□ 1.09
RAPH1-201ENST00000308091 LMBR1LQ6UX01 489 aa21.85■■□□□ 1.09
RAPH1-201ENST00000308091 RBM43Q6ZSC3 357 aaKnown RBP21.85■■□□□ 1.09
RAPH1-201ENST00000308091 NEUROD6Q96NK8 337 aa21.85■■□□□ 1.09
RAPH1-201ENST00000308091 SLIT3O75094 1523 aa21.85■■□□□ 1.09
RAPH1-201ENST00000308091 GOLIM4O00461 696 aa21.85■■□□□ 1.09
RAPH1-201ENST00000308091 CHST3Q7LGC8 479 aa21.85■■□□□ 1.09
RAPH1-201ENST00000308091 HAUS7Q99871 368 aa21.85■■□□□ 1.09
RAPH1-201ENST00000308091 NCOA5Q9HCD5 579 aaKnown RBP21.85■■□□□ 1.09
RAPH1-201ENST00000308091 RGPD5Q99666 1765 aa21.85■■□□□ 1.09
RAPH1-201ENST00000308091 GUCY1B3Q02153 619 aa21.84■■□□□ 1.09
RAPH1-201ENST00000308091 TTC5Q8N0Z6 440 aa21.84■■□□□ 1.09
RAPH1-201ENST00000308091 KLHL34Q8N239 644 aa21.84■■□□□ 1.09
RAPH1-201ENST00000308091 TIMM10P62072 90 aa21.83■■□□□ 1.09
RAPH1-201ENST00000308091 IRX5P78411 483 aaPredicted RBP21.83■■□□□ 1.09
RAPH1-201ENST00000308091 CTDNEP1O95476 244 aa21.83■■□□□ 1.08
RAPH1-201ENST00000308091 SNRPA1P09661 255 aaKnown RBP21.83■■□□□ 1.08
RAPH1-201ENST00000308091 TPD52L1Q16890 204 aaPredicted RBP21.83■■□□□ 1.08
RAPH1-201ENST00000308091 RABL6Q3YEC7 729 aaPredicted RBP21.83■■□□□ 1.08
RAPH1-201ENST00000308091 PLA2G4DQ86XP0 818 aa21.83■■□□□ 1.08
RAPH1-201ENST00000308091 DDX41Q9UJV9 622 aaKnown RBP21.83■■□□□ 1.08
RAPH1-201ENST00000308091 TATP17735 454 aaPredicted RBP21.82■■□□□ 1.08
RAPH1-201ENST00000308091 C11orf57Q6ZUT1 292 aaPredicted RBP21.82■■□□□ 1.08
RAPH1-201ENST00000308091 CCDC112Q8NEF3 446 aa21.82■■□□□ 1.08
RAPH1-201ENST00000308091 TDRD7Q8NHU6 1098 aaKnown RBP21.82■■□□□ 1.08
RAPH1-201ENST00000308091 ERCC4Q92889 916 aaPredicted RBP21.82■■□□□ 1.08
RAPH1-201ENST00000308091 CSB-PGBD3P0DP91 1061 aa21.82■■□□□ 1.08
RAPH1-201ENST00000308091 CCDC144BQ3MJ40 725 aa21.82■■□□□ 1.08
RAPH1-201ENST00000308091 ZSCAN25Q6NSZ9 544 aa21.82■■□□□ 1.08
RAPH1-201ENST00000308091 CCDC144CPQ8IYA2 1237 aa21.82■■□□□ 1.08
RAPH1-201ENST00000308091 NSUN7Q8NE18 718 aaKnown RBP21.82■■□□□ 1.08
RAPH1-201ENST00000308091 ADD1P35611 737 aaKnown RBP21.82■■□□□ 1.08
RAPH1-201ENST00000308091 KBTBD3Q8NAB2 608 aa21.82■■□□□ 1.08
RAPH1-201ENST00000308091 CABLES1Q8TDN4 633 aa21.82■■□□□ 1.08
RAPH1-201ENST00000308091 GOLPH3LQ9H4A5 285 aa21.82■■□□□ 1.08
RAPH1-201ENST00000308091 MEGF6O75095 1541 aa21.81■■□□□ 1.08
RAPH1-201ENST00000308091 PTPDC1A2A3K4 754 aa21.81■■□□□ 1.08
RAPH1-201ENST00000308091 FBXW7Q969H0 707 aa21.81■■□□□ 1.08
RAPH1-201ENST00000308091 CYP27B1O15528 508 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms