RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ZNHIT6Q9NWK9 470 aaKnown RBP15.38■□□□□ 0.05
DDX54-201ENST00000306014 TOM1O60784 492 aa15.38■□□□□ 0.05
DDX54-201ENST00000306014 EIF3JO75822 258 aaKnown RBP15.38■□□□□ 0.05
DDX54-201ENST00000306014 GNG11P61952 73 aa15.38■□□□□ 0.05
DDX54-201ENST00000306014 KIF4BQ2VIQ3 1234 aa15.38■□□□□ 0.05
DDX54-201ENST00000306014 METAP2P50579 478 aaKnown RBP eCLIP15.37■□□□□ 0.059e-7■■■□□ 16.7
DDX54-201ENST00000306014 CCDC102BQ68D86 513 aa15.37■□□□□ 0.05
DDX54-201ENST00000306014 NFATC2IPQ8NCF5 419 aa15.37■□□□□ 0.05
DDX54-201ENST00000306014 MAP3K4Q9Y6R4 1608 aa15.37■□□□□ 0.05
DDX54-201ENST00000306014 G3V3G9 751 aa15.37■□□□□ 0.05
DDX54-201ENST00000306014 U2AF2P26368 475 aaKnown RBP eCLIP15.37■□□□□ 0.05
DDX54-201ENST00000306014 SETQ01105 290 aaPredicted RBP15.37■□□□□ 0.05
DDX54-201ENST00000306014 DCAF8Q5TAQ9 597 aa15.37■□□□□ 0.05
DDX54-201ENST00000306014 PAG1Q9NWQ8 432 aa15.37■□□□□ 0.05
DDX54-201ENST00000306014 MTMR6Q9Y217 621 aa15.37■□□□□ 0.05
DDX54-201ENST00000306014 ABCC3O15438 1527 aa15.37■□□□□ 0.05
DDX54-201ENST00000306014 JAK2O60674 1132 aa15.37■□□□□ 0.05
DDX54-201ENST00000306014 GPTP24298 496 aa15.37■□□□□ 0.05
DDX54-201ENST00000306014 BMS1Q14692 1282 aaKnown RBP15.37■□□□□ 0.05
DDX54-201ENST00000306014 RAI14Q9P0K7 980 aa15.37■□□□□ 0.05
DDX54-201ENST00000306014 A0A1B0GVL5 298 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 SLU7O95391 586 aaKnown RBP15.36■□□□□ 0.05
DDX54-201ENST00000306014 LIG1P18858 919 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 GTF2F1P35269 517 aaKnown RBP eCLIP15.36■□□□□ 0.051e-7■■■■■ 30.9
DDX54-201ENST00000306014 CUL4AQ13619 759 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 RGS12O14924 1447 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 SPTLC2O15270 562 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 TAF3Q5VWG9 929 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 LDHAL6AQ6ZMR3 332 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 CLSTN2Q9H4D0 955 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 IFNKQ9P0W0 207 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 CEP131Q9UPN4 1083 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 PTCH1Q13635 1447 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 SSH2Q76I76 1423 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 FAM135BQ49AJ0 1406 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 EFCAB6Q5THR3 1501 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 KIF5CO60282 957 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 ZNF75DP51815 510 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 CHRNA2Q15822 529 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 TMEM67Q5HYA8 995 aa15.36■□□□□ 0.05
DDX54-201ENST00000306014 EDC3Q96F86 508 aaKnown RBP15.36■□□□□ 0.05
DDX54-201ENST00000306014 UBAP1LF5GYI3 381 aa15.35■□□□□ 0.05
DDX54-201ENST00000306014 RNMTO43148 476 aaKnown RBP15.35■□□□□ 0.05
DDX54-201ENST00000306014 SSRP1Q08945 709 aaKnown RBP15.35■□□□□ 0.05
DDX54-201ENST00000306014 SMAP1Q8IYB5 467 aaPredicted RBP15.35■□□□□ 0.05
DDX54-201ENST00000306014 DDX21Q9NR30 783 aaKnown RBP eCLIP15.35■□□□□ 0.05
DDX54-201ENST00000306014 GNL3LQ9NVN8 582 aaKnown RBP15.35■□□□□ 0.05
DDX54-201ENST00000306014 SUCLG2Q96I99 432 aa15.35■□□□□ 0.05
DDX54-201ENST00000306014 ALG1Q9BT22 464 aa15.35■□□□□ 0.05
DDX54-201ENST00000306014 SLC26A6Q9BXS9 759 aa15.35■□□□□ 0.05
DDX54-201ENST00000306014 NCOA5Q9HCD5 579 aaKnown RBP15.35■□□□□ 0.05
DDX54-201ENST00000306014 STAP2Q9UGK3 403 aa15.35■□□□□ 0.05
DDX54-201ENST00000306014 HSP90AB3PQ58FF7 597 aa15.35■□□□□ 0.05
DDX54-201ENST00000306014 BABAM1Q9NWV8 329 aa15.35■□□□□ 0.05
DDX54-201ENST00000306014 TET3O43151 1660 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 STIM1Q13586 685 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 DBNDD2Q9BQY9 259 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 TM6SF1Q9BZW5 370 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 BCL2L12Q9HB09 334 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 KCNQ3O43525 872 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 PRC1O43663 620 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 FAM193AP78312 1265 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 ADCK5Q3MIX3 580 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 IP6K1Q92551 441 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 TPCN1Q9ULQ1 816 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 ARHGAP31Q2M1Z3 1444 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 SYT10Q6XYQ8 523 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 TTC6Q86TZ1 520 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 AATKQ6ZMQ8 1374 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 CCDC196A0A1B0GTZ2 297 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 STARD3NLO95772 234 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 EIF4A1P60842 406 aaKnown RBP15.34■□□□□ 0.05
DDX54-201ENST00000306014 TIMM10P62072 90 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 LRMPQ12912 555 aa15.34■□□□□ 0.05
DDX54-201ENST00000306014 PLEKHG3A1L390 1219 aa15.33■□□□□ 0.04
DDX54-201ENST00000306014 FAM160A1Q05DH4 1040 aa15.33■□□□□ 0.04
DDX54-201ENST00000306014 MAP3K12Q12852 859 aa15.33■□□□□ 0.04
DDX54-201ENST00000306014 IL15P40933 162 aaPredicted RBP15.33■□□□□ 0.04
DDX54-201ENST00000306014 JAKMIP3Q5VZ66 844 aa15.33■□□□□ 0.04
DDX54-201ENST00000306014 GTPBP4Q9BZE4 634 aaKnown RBP15.33■□□□□ 0.04
DDX54-201ENST00000306014 LSG1Q9H089 658 aaKnown RBP15.33■□□□□ 0.04
DDX54-201ENST00000306014 HOXB7P09629 217 aa15.32■□□□□ 0.04
DDX54-201ENST00000306014 SIRT1Q96EB6 747 aa15.32■□□□□ 0.04
DDX54-201ENST00000306014 CEP89Q96ST8 783 aa15.32■□□□□ 0.04
DDX54-201ENST00000306014 TMX4Q9H1E5 349 aaPredicted RBP15.32■□□□□ 0.04
DDX54-201ENST00000306014 DEF6Q9H4E7 631 aa15.32■□□□□ 0.04
DDX54-201ENST00000306014 ARHGEF10O15013 1369 aa15.32■□□□□ 0.04
DDX54-201ENST00000306014 EIF5P55010 431 aaKnown RBP15.32■□□□□ 0.04
DDX54-201ENST00000306014 ZNF397Q8NF99 534 aaPredicted RBP15.32■□□□□ 0.04
DDX54-201ENST00000306014 CCDC12Q8WUD4 166 aaPredicted RBP15.32■□□□□ 0.04
DDX54-201ENST00000306014 ORAI2Q96SN7 254 aa15.32■□□□□ 0.04
DDX54-201ENST00000306014 TRMT112Q9UI30 125 aaKnown RBP15.32■□□□□ 0.04
DDX54-201ENST00000306014 OTUD7BQ6GQQ9 843 aa15.32■□□□□ 0.04
DDX54-201ENST00000306014 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.32■□□□□ 0.04
DDX54-201ENST00000306014 EAF2Q96CJ1 260 aaPredicted RBP15.32■□□□□ 0.04
DDX54-201ENST00000306014 CALCOCO1Q9P1Z2 691 aa15.32■□□□□ 0.04
DDX54-201ENST00000306014 A0A0D9SFI3 127 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 GCP02774 474 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 NBPF6Q5VWK0 638 aa15.31■□□□□ 0.04
DDX54-201ENST00000306014 CDK5RAP3Q96JB5 506 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms