RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 HOXB7P09629 217 aa7.44□□□□□ -1.22
SCAPER-201ENST00000303521 REM2Q8IYK8 340 aaPredicted RBP7.44□□□□□ -1.22
SCAPER-201ENST00000303521 IGHDP01880 384 aa7.44□□□□□ -1.22
SCAPER-201ENST00000303521 PHKG2P15735 406 aa7.44□□□□□ -1.22
SCAPER-201ENST00000303521 IREB2P48200 963 aaKnown RBP7.44□□□□□ -1.22
SCAPER-201ENST00000303521 HDAC1Q13547 482 aaPredicted RBP7.44□□□□□ -1.22
SCAPER-201ENST00000303521 ALDH1L2Q3SY69 923 aa7.44□□□□□ -1.22
SCAPER-201ENST00000303521 CNTROBQ8N137 903 aa7.44□□□□□ -1.22
SCAPER-201ENST00000303521 LMNB1P20700 586 aa7.44□□□□□ -1.22
SCAPER-201ENST00000303521 EIF4A2Q14240 407 aaKnown RBP7.44□□□□□ -1.22
SCAPER-201ENST00000303521 CLEC4GQ6UXB4 293 aa7.44□□□□□ -1.22
SCAPER-201ENST00000303521 ZSCAN31Q96LW9 406 aaPredicted RBP7.44□□□□□ -1.22
SCAPER-201ENST00000303521 TIGD1Q96MW7 591 aa7.44□□□□□ -1.22
SCAPER-201ENST00000303521 TNMDQ9H2S6 317 aa7.44□□□□□ -1.22
SCAPER-201ENST00000303521 PAXBP1Q9Y5B6 917 aa7.44□□□□□ -1.22
SCAPER-201ENST00000303521 POLR3DP05423 398 aaPredicted RBP7.43□□□□□ -1.22
SCAPER-201ENST00000303521 PDE4CQ08493 712 aa7.43□□□□□ -1.22
SCAPER-201ENST00000303521 PLEKHG2Q9H7P9 1386 aa7.43□□□□□ -1.22
SCAPER-201ENST00000303521 ERLIN1O75477 346 aa7.43□□□□□ -1.22
SCAPER-201ENST00000303521 UFL1O94874 794 aa7.43□□□□□ -1.22
SCAPER-201ENST00000303521 SPINK5Q9NQ38 1064 aaPredicted RBP7.43□□□□□ -1.22
SCAPER-201ENST00000303521 WWC3Q9ULE0 1092 aa7.43□□□□□ -1.22
SCAPER-201ENST00000303521 TULP1O00294 542 aaPredicted RBP7.43□□□□□ -1.22
SCAPER-201ENST00000303521 KRT85P78386 507 aa7.43□□□□□ -1.22
SCAPER-201ENST00000303521 SREBF2Q12772 1141 aa7.43□□□□□ -1.22
SCAPER-201ENST00000303521 EYA1Q99502 592 aa7.43□□□□□ -1.22
SCAPER-201ENST00000303521 NOL7Q9UMY1 257 aaKnown RBP7.43□□□□□ -1.22
SCAPER-201ENST00000303521 PIK3C2BO00750 1634 aa7.43□□□□□ -1.22
SCAPER-201ENST00000303521 RDXP35241 583 aaKnown RBP7.43□□□□□ -1.22
SCAPER-201ENST00000303521 NUP62CLQ9H1M0 184 aa7.43□□□□□ -1.22
SCAPER-201ENST00000303521 KIAA1210Q9ULL0 1709 aa7.43□□□□□ -1.22
SCAPER-201ENST00000303521 ALKQ9UM73 1620 aa7.43□□□□□ -1.22
SCAPER-201ENST00000303521 FIBPO43427 364 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 SLC4A2P04920 1241 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 APLP1P51693 650 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 MAP3K12Q12852 859 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 VTI1AQ96AJ9 217 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 KDM5AP29375 1690 aaKnown RBP7.42□□□□□ -1.22
SCAPER-201ENST00000303521 DLC1Q96QB1 1528 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 CDK12Q9NYV4 1490 aaPredicted RBP7.42□□□□□ -1.22
SCAPER-201ENST00000303521 TUBGCP6Q96RT7 1819 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 PPRC1Q5VV67 1664 aaKnown RBP7.42□□□□□ -1.22
SCAPER-201ENST00000303521 ANKRD1Q15327 319 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 TTF1Q15361 905 aaPredicted RBP7.42□□□□□ -1.22
SCAPER-201ENST00000303521 ANKRD20A12PQ8NF67 263 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 PNMA2Q9UL42 364 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 ASXL1Q8IXJ9 1541 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 PPEF1O14829 653 aaPredicted RBP7.42□□□□□ -1.22
SCAPER-201ENST00000303521 KINO60870 393 aaKnown RBP7.42□□□□□ -1.22
SCAPER-201ENST00000303521 CRKLP46109 303 aaKnown RBP7.42□□□□□ -1.22
SCAPER-201ENST00000303521 CCDC178Q5BJE1 867 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 OLFM4Q6UX06 510 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 FILIP1Q7Z7B0 1213 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 ZNF396Q96N95 335 aaPredicted RBP7.42□□□□□ -1.22
SCAPER-201ENST00000303521 DNAI2Q9GZS0 605 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 CPDO75976 1380 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 ATP2B2Q01814 1243 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 MAP3K11Q16584 847 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 ZNF790Q6PG37 636 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 RUFY1Q96T51 708 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 DEF6Q9H4E7 631 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 KAT6BQ8WYB5 2073 aa7.42□□□□□ -1.22
SCAPER-201ENST00000303521 CBFA2T2O43439 604 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 CCNA1P78396 465 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 LDHAL6AQ6ZMR3 332 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 RPAP2Q8IXW5 612 aaPredicted RBP7.41□□□□□ -1.22
SCAPER-201ENST00000303521 KRT222Q8N1A0 295 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.41□□□□□ -1.22
SCAPER-201ENST00000303521 SPDYE4A6NLX3 237 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 GNAI2P04899 355 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 CDR1P51861 262 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 TMCO3Q6UWJ1 677 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 NBPF11Q86T75 865 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 DHX37Q8IY37 1157 aaKnown RBP7.41□□□□□ -1.22
SCAPER-201ENST00000303521 A0A1W2PP64 1363 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 CPSF1Q10570 1443 aaKnown RBP7.41□□□□□ -1.22
SCAPER-201ENST00000303521 FAM182BQ5T319 152 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 C3P01024 1663 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 IRS4O14654 1257 aaPredicted RBP7.41□□□□□ -1.22
SCAPER-201ENST00000303521 NOLC1Q14978 699 aaKnown RBP eCLIP7.41□□□□□ -1.22
SCAPER-201ENST00000303521 USPL1Q5W0Q7 1092 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 RALYLQ86SE5 291 aaKnown RBP7.41□□□□□ -1.22
SCAPER-201ENST00000303521 CARMIL3Q8ND23 1372 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 SMC2O95347 1197 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 IPO7O95373 1038 aaKnown RBP7.41□□□□□ -1.22
SCAPER-201ENST00000303521 PTPN14Q15678 1187 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 KIF18AQ8NI77 898 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 DNAAF4Q8WXU2 420 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 NARFQ9UHQ1 456 aa7.41□□□□□ -1.22
SCAPER-201ENST00000303521 ADAMTS13Q76LX8 1427 aa7.4□□□□□ -1.22
SCAPER-201ENST00000303521 ERICH4A6NGS2 130 aa7.4□□□□□ -1.22
SCAPER-201ENST00000303521 ALDH1A1P00352 501 aa7.4□□□□□ -1.22
SCAPER-201ENST00000303521 XBP1P17861 261 aa7.4□□□□□ -1.22
SCAPER-201ENST00000303521 UBXN2AP68543 259 aa7.4□□□□□ -1.22
SCAPER-201ENST00000303521 APOBEC3FQ8IUX4 373 aaKnown RBP7.4□□□□□ -1.22
SCAPER-201ENST00000303521 DNAJC10Q8IXB1 793 aa7.4□□□□□ -1.22
SCAPER-201ENST00000303521 TMEM57Q8N5G2 664 aa7.4□□□□□ -1.22
SCAPER-201ENST00000303521 BBXQ8WY36 941 aaPredicted RBP7.4□□□□□ -1.22
SCAPER-201ENST00000303521 FAM107BQ9H098 131 aa7.4□□□□□ -1.22
SCAPER-201ENST00000303521 OGFRQ9NZT2 677 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms