RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 PLCH2O75038 1416 aa13.67□□□□□ -0.22
ERCC1-202ENST00000300853 CHMP4BP1P59074 171 aa13.66□□□□□ -0.22
ERCC1-202ENST00000300853 C1orf141Q5JVX7 400 aa13.66□□□□□ -0.22
ERCC1-202ENST00000300853 DHX37Q8IY37 1157 aaKnown RBP13.66□□□□□ -0.22
ERCC1-202ENST00000300853 SAMD9LQ8IVG5 1584 aa13.66□□□□□ -0.22
ERCC1-202ENST00000300853 PIK3R4Q99570 1358 aa13.66□□□□□ -0.22
ERCC1-202ENST00000300853 ACTN2P35609 894 aa13.66□□□□□ -0.22
ERCC1-202ENST00000300853 NLRP6P59044 892 aa13.66□□□□□ -0.22
ERCC1-202ENST00000300853 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.66□□□□□ -0.22
ERCC1-202ENST00000300853 ANKRD65E5RJM6 399 aa13.66□□□□□ -0.22
ERCC1-202ENST00000300853 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
ERCC1-202ENST00000300853 CEP112Q8N8E3 955 aa13.66□□□□□ -0.22
ERCC1-202ENST00000300853 KCNG4Q8TDN1 519 aa13.66□□□□□ -0.22
ERCC1-202ENST00000300853 FUCA2Q9BTY2 467 aa13.66□□□□□ -0.22
ERCC1-202ENST00000300853 JRKLQ9Y4A0 524 aa13.66□□□□□ -0.22
ERCC1-202ENST00000300853 SPTLC2O15270 562 aa13.65□□□□□ -0.22
ERCC1-202ENST00000300853 EPC1Q9H2F5 836 aa13.65□□□□□ -0.22
ERCC1-202ENST00000300853 CCDC175P0C221 793 aa13.65□□□□□ -0.22
ERCC1-202ENST00000300853 CCDC148Q8NFR7 591 aa13.65□□□□□ -0.22
ERCC1-202ENST00000300853 ZNF330Q9Y3S2 320 aaPredicted RBP13.65□□□□□ -0.22
ERCC1-202ENST00000300853 HMGB1P09429 215 aaKnown RBP13.65□□□□□ -0.22
ERCC1-202ENST00000300853 ST5P78524 1137 aa13.65□□□□□ -0.22
ERCC1-202ENST00000300853 APOBRQ0VD83 1088 aa13.65□□□□□ -0.22
ERCC1-202ENST00000300853 E2F4Q16254 413 aa13.65□□□□□ -0.22
ERCC1-202ENST00000300853 ICE2Q659A1 982 aa13.65□□□□□ -0.22
ERCC1-202ENST00000300853 TTC14Q96N46 770 aa13.65□□□□□ -0.22
ERCC1-202ENST00000300853 USP28Q96RU2 1077 aa13.65□□□□□ -0.22
ERCC1-202ENST00000300853 PDE11AQ9HCR9 933 aa13.65□□□□□ -0.22
ERCC1-202ENST00000300853 EBAG9O00559 213 aa13.64□□□□□ -0.23
ERCC1-202ENST00000300853 ZNF569Q5MCW4 686 aa13.64□□□□□ -0.23
ERCC1-202ENST00000300853 PHAXQ9H814 394 aaKnown RBP13.64□□□□□ -0.23
ERCC1-202ENST00000300853 MYL5Q02045 173 aa13.64□□□□□ -0.23
ERCC1-202ENST00000300853 MTHFSDQ2M296 383 aaKnown RBP13.64□□□□□ -0.23
ERCC1-202ENST00000300853 CT47A1Q5JQC4 288 aaPredicted RBP13.64□□□□□ -0.23
ERCC1-202ENST00000300853 FTOQ9C0B1 505 aaKnown RBP eCLIP13.64□□□□□ -0.23
ERCC1-202ENST00000300853 RABEP2Q9H5N1 569 aa13.64□□□□□ -0.23
ERCC1-202ENST00000300853 ADAM21Q9UKJ8 722 aa13.64□□□□□ -0.23
ERCC1-202ENST00000300853 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
ERCC1-202ENST00000300853 CDC42BPAQ5VT25 1732 aa13.64□□□□□ -0.23
ERCC1-202ENST00000300853 ARHGAP6O43182 974 aa13.64□□□□□ -0.23
ERCC1-202ENST00000300853 DNAJC21Q5F1R6 531 aaKnown RBP13.64□□□□□ -0.23
ERCC1-202ENST00000300853 UGGT1Q9NYU2 1555 aa13.64□□□□□ -0.23
ERCC1-202ENST00000300853 CALRP27797 417 aaKnown RBP13.63□□□□□ -0.23
ERCC1-202ENST00000300853 LONRF2Q1L5Z9 754 aa13.63□□□□□ -0.23
ERCC1-202ENST00000300853 RNF187Q5TA31 235 aaPredicted RBP13.63□□□□□ -0.23
ERCC1-202ENST00000300853 EXOC4Q96A65 974 aa13.63□□□□□ -0.23
ERCC1-202ENST00000300853 USP44Q9H0E7 712 aa13.63□□□□□ -0.23
ERCC1-202ENST00000300853 ATP8B1O43520 1251 aa13.63□□□□□ -0.23
ERCC1-202ENST00000300853 SARM1Q6SZW1 724 aa13.63□□□□□ -0.23
ERCC1-202ENST00000300853 CHST3Q7LGC8 479 aa13.63□□□□□ -0.23
ERCC1-202ENST00000300853 WASLO00401 505 aaPredicted RBP13.63□□□□□ -0.23
ERCC1-202ENST00000300853 NAP1L1P55209 391 aaKnown RBP13.63□□□□□ -0.23
ERCC1-202ENST00000300853 GOLGA8FQ08AF8 430 aa13.63□□□□□ -0.23
ERCC1-202ENST00000300853 GOLGA8DPQ0D2H9 430 aa13.63□□□□□ -0.23
ERCC1-202ENST00000300853 CCDC102BQ68D86 513 aa13.63□□□□□ -0.23
ERCC1-202ENST00000300853 FBXO18Q8NFZ0 1043 aa13.63□□□□□ -0.23
ERCC1-202ENST00000300853 PGBD1Q96JS3 809 aa13.63□□□□□ -0.23
ERCC1-202ENST00000300853 NCOA5Q9HCD5 579 aaKnown RBP13.63□□□□□ -0.23
ERCC1-202ENST00000300853 MED14O60244 1454 aa13.63□□□□□ -0.23
ERCC1-202ENST00000300853 CTAGE9A4FU28 777 aa13.62□□□□□ -0.23
ERCC1-202ENST00000300853 GOLGA8BA8MQT2 603 aa13.62□□□□□ -0.23
ERCC1-202ENST00000300853 PTPN21Q16825 1174 aa13.62□□□□□ -0.23
ERCC1-202ENST00000300853 KIAA1468Q9P260 1216 aa13.62□□□□□ -0.23
ERCC1-202ENST00000300853 OTUD7BQ6GQQ9 843 aa13.62□□□□□ -0.23
ERCC1-202ENST00000300853 SSH3Q8TE77 659 aa13.62□□□□□ -0.23
ERCC1-202ENST00000300853 TRPM2O94759 1503 aa13.62□□□□□ -0.23
ERCC1-202ENST00000300853 NBPF7P0C2Y1 421 aaPredicted RBP13.62□□□□□ -0.23
ERCC1-202ENST00000300853 DPCR1Q3MIW9 517 aa13.62□□□□□ -0.23
ERCC1-202ENST00000300853 DESI2Q9BSY9 194 aa13.62□□□□□ -0.23
ERCC1-202ENST00000300853 PARD6BQ9BYG5 372 aa13.62□□□□□ -0.23
ERCC1-202ENST00000300853 MKRN1Q9UHC7 482 aaKnown RBP13.62□□□□□ -0.23
ERCC1-202ENST00000300853 MTX1Q13505 466 aa13.61□□□□□ -0.23
ERCC1-202ENST00000300853 DDX46Q7L014 1031 aaKnown RBP13.61□□□□□ -0.23
ERCC1-202ENST00000300853 PPP2R2CQ9Y2T4 447 aa13.61□□□□□ -0.23
ERCC1-202ENST00000300853 MCM3P25205 808 aa13.61□□□□□ -0.23
ERCC1-202ENST00000300853 CCZ1BP86790 482 aa13.61□□□□□ -0.23
ERCC1-202ENST00000300853 CCZ1P86791 482 aaPredicted RBP13.61□□□□□ -0.23
ERCC1-202ENST00000300853 BRD3Q15059 726 aa13.61□□□□□ -0.23
ERCC1-202ENST00000300853 AFAP1L1Q8TED9 768 aa13.61□□□□□ -0.23
ERCC1-202ENST00000300853 IL25Q9H293 177 aa13.61□□□□□ -0.23
ERCC1-202ENST00000300853 KIAA1328Q86T90 577 aa13.61□□□□□ -0.23
ERCC1-202ENST00000300853 CHPF2Q9P2E5 772 aa13.61□□□□□ -0.23
ERCC1-202ENST00000300853 KIAA0232Q92628 1395 aa13.61□□□□□ -0.23
ERCC1-202ENST00000300853 CC2D1AQ6P1N0 951 aaPredicted RBP13.6□□□□□ -0.23
ERCC1-202ENST00000300853 NYAP1Q6ZVC0 841 aa13.6□□□□□ -0.23
ERCC1-202ENST00000300853 RABGGTAQ92696 567 aa13.6□□□□□ -0.23
ERCC1-202ENST00000300853 FAN1Q9Y2M0 1017 aa13.6□□□□□ -0.23
ERCC1-202ENST00000300853 ZNF202O95125 648 aa13.6□□□□□ -0.23
ERCC1-202ENST00000300853 NLRP12P59046 1061 aa13.6□□□□□ -0.23
ERCC1-202ENST00000300853 CFAP65Q6ZU64 1925 aaKnown RBP13.6□□□□□ -0.23
ERCC1-202ENST00000300853 PHLPP2Q6ZVD8 1323 aa13.6□□□□□ -0.23
ERCC1-202ENST00000300853 PLEKHA4Q9H4M7 779 aa13.6□□□□□ -0.23
ERCC1-202ENST00000300853 PLA2G4AP47712 749 aa13.6□□□□□ -0.23
ERCC1-202ENST00000300853 HAND2P61296 217 aa13.6□□□□□ -0.23
ERCC1-202ENST00000300853 MAP3K2Q9Y2U5 619 aa13.6□□□□□ -0.23
ERCC1-202ENST00000300853 IQGAP3Q86VI3 1631 aa13.59□□□□□ -0.23
ERCC1-202ENST00000300853 NCKAP5LQ9HCH0 1330 aa13.59□□□□□ -0.23
ERCC1-202ENST00000300853 MAP2K2P36507 400 aa13.59□□□□□ -0.23
ERCC1-202ENST00000300853 ADKP55263 362 aaKnown RBP13.59□□□□□ -0.23
ERCC1-202ENST00000300853 SART3Q15020 963 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms