RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ZSCAN22P10073 491 aaPredicted RBP11.99□□□□□ -0.49
FOXN4-201ENST00000299162 BRD2P25440 801 aaKnown RBP11.99□□□□□ -0.49
FOXN4-201ENST00000299162 GUCY1B3Q02153 619 aa11.99□□□□□ -0.49
FOXN4-201ENST00000299162 INTS4Q96HW7 963 aaKnown RBP11.99□□□□□ -0.49
FOXN4-201ENST00000299162 ISY1Q9ULR0 285 aaKnown RBP11.99□□□□□ -0.49
FOXN4-201ENST00000299162 TRPM3Q9HCF6 1732 aaPredicted RBP11.99□□□□□ -0.49
FOXN4-201ENST00000299162 TAF5LO75529 589 aa11.99□□□□□ -0.49
FOXN4-201ENST00000299162 BRF1Q92994 677 aa11.99□□□□□ -0.49
FOXN4-201ENST00000299162 PAG1Q9NWQ8 432 aa11.99□□□□□ -0.49
FOXN4-201ENST00000299162 STRCP1A6NGW2 1772 aa11.99□□□□□ -0.49
FOXN4-201ENST00000299162 ZBTB1Q9Y2K1 713 aa11.98□□□□□ -0.49
FOXN4-201ENST00000299162 ERVV-2B6SEH9 535 aa11.98□□□□□ -0.49
FOXN4-201ENST00000299162 HIP1O00291 1037 aa11.98□□□□□ -0.49
FOXN4-201ENST00000299162 TTC39AQ5SRH9 613 aa11.98□□□□□ -0.49
FOXN4-201ENST00000299162 CDC37L1Q7L3B6 337 aa11.98□□□□□ -0.49
FOXN4-201ENST00000299162 ATG9AQ7Z3C6 839 aa11.98□□□□□ -0.49
FOXN4-201ENST00000299162 ZSWIM6Q9HCJ5 1215 aa11.98□□□□□ -0.49
FOXN4-201ENST00000299162 CNNM1Q9NRU3 951 aa11.98□□□□□ -0.49
FOXN4-201ENST00000299162 TRMT112Q9UI30 125 aaKnown RBP11.98□□□□□ -0.49
FOXN4-201ENST00000299162 USP42Q9H9J4 1324 aaKnown RBP11.98□□□□□ -0.49
FOXN4-201ENST00000299162 ATP5JP18859 108 aa11.98□□□□□ -0.49
FOXN4-201ENST00000299162 CAMK4Q16566 473 aa11.98□□□□□ -0.49
FOXN4-201ENST00000299162 Q6ZUG5 572 aa11.98□□□□□ -0.49
FOXN4-201ENST00000299162 H7C1W4 665 aa11.97□□□□□ -0.49
FOXN4-201ENST00000299162 PSMA5P28066 241 aa11.97□□□□□ -0.49
FOXN4-201ENST00000299162 CASP7P55210 303 aa11.97□□□□□ -0.49
FOXN4-201ENST00000299162 ST3GAL1Q11201 340 aa11.97□□□□□ -0.49
FOXN4-201ENST00000299162 METTL24Q5JXM2 366 aa11.97□□□□□ -0.49
FOXN4-201ENST00000299162 ATG3Q9NT62 314 aa11.97□□□□□ -0.49
FOXN4-201ENST00000299162 RPAP1Q9BWH6 1393 aaPredicted RBP11.97□□□□□ -0.49
FOXN4-201ENST00000299162 EYA2O00167 538 aa11.97□□□□□ -0.49
FOXN4-201ENST00000299162 STARD3NLO95772 234 aa11.97□□□□□ -0.49
FOXN4-201ENST00000299162 F13A1P00488 732 aa11.97□□□□□ -0.49
FOXN4-201ENST00000299162 CYP21A2P08686 494 aa11.97□□□□□ -0.49
FOXN4-201ENST00000299162 HCLS1P14317 486 aaPredicted RBP11.97□□□□□ -0.49
FOXN4-201ENST00000299162 SCARF1Q14162 830 aa11.97□□□□□ -0.49
FOXN4-201ENST00000299162 UTP14CQ5TAP6 766 aaKnown RBP11.97□□□□□ -0.49
FOXN4-201ENST00000299162 LDHAL6AQ6ZMR3 332 aa11.97□□□□□ -0.49
FOXN4-201ENST00000299162 NCOA5Q9HCD5 579 aaKnown RBP11.97□□□□□ -0.49
FOXN4-201ENST00000299162 SOS2Q07890 1332 aaPredicted RBP11.97□□□□□ -0.49
FOXN4-201ENST00000299162 OVOS2A0A0G2JMS6 1433 aa11.97□□□□□ -0.49
FOXN4-201ENST00000299162 EXOC5O00471 708 aa11.96□□□□□ -0.49
FOXN4-201ENST00000299162 APPP05067 770 aa11.96□□□□□ -0.49
FOXN4-201ENST00000299162 IFIT5Q13325 482 aaKnown RBP11.96□□□□□ -0.49
FOXN4-201ENST00000299162 MCMDC2Q4G0Z9 681 aa11.96□□□□□ -0.49
FOXN4-201ENST00000299162 GIMAP6Q6P9H5 292 aa11.96□□□□□ -0.49
FOXN4-201ENST00000299162 NEK1Q96PY6 1258 aa11.96□□□□□ -0.49
FOXN4-201ENST00000299162 COL15A1P39059 1388 aa11.96□□□□□ -0.49
FOXN4-201ENST00000299162 C5P01031 1676 aa11.96□□□□□ -0.49
FOXN4-201ENST00000299162 RABL6Q3YEC7 729 aaPredicted RBP11.96□□□□□ -0.49
FOXN4-201ENST00000299162 PPP1R9BQ96SB3 815 aa11.96□□□□□ -0.49
FOXN4-201ENST00000299162 GREM2Q9H772 168 aa11.96□□□□□ -0.49
FOXN4-201ENST00000299162 GPHNQ9NQX3 736 aaPredicted RBP11.96□□□□□ -0.49
FOXN4-201ENST00000299162 APOBRQ0VD83 1088 aa11.96□□□□□ -0.5
FOXN4-201ENST00000299162 CLEC17AQ6ZS10 378 aa11.96□□□□□ -0.5
FOXN4-201ENST00000299162 CCDC191Q8NCU4 936 aa11.96□□□□□ -0.5
FOXN4-201ENST00000299162 IQSEC3Q9UPP2 1182 aaPredicted RBP11.96□□□□□ -0.5
FOXN4-201ENST00000299162 IDH1O75874 414 aaKnown RBP11.95□□□□□ -0.5
FOXN4-201ENST00000299162 RPS6KB1P23443 525 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 TCIRG1Q13488 830 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 GOLGA6L4A6NEF3 574 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 H3BQV1 296 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 MBD3O95983 291 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 IL15P40933 162 aaPredicted RBP11.95□□□□□ -0.5
FOXN4-201ENST00000299162 IFFO2Q5TF58 517 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 CERS3Q8IU89 383 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 FBXW7Q969H0 707 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 XAGE2Q96GT9 111 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 HAUS7Q99871 368 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 MTMR6Q9Y217 621 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 ZNF609O15014 1411 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 COL5A2P05997 1499 aaPredicted RBP11.95□□□□□ -0.5
FOXN4-201ENST00000299162 ZAP70P43403 619 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 TOB2Q14106 344 aaPredicted RBP11.95□□□□□ -0.5
FOXN4-201ENST00000299162 CCDC158Q5M9N0 1113 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 BICDL1Q6ZP65 573 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 KBTBD3Q8NAB2 608 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 FAM184AQ8NB25 1140 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 ZKSCAN5Q9Y2L8 839 aa11.95□□□□□ -0.5
FOXN4-201ENST00000299162 ITGA6P23229 1130 aa11.94□□□□□ -0.5
FOXN4-201ENST00000299162 SLC4A9Q96Q91 983 aa11.94□□□□□ -0.5
FOXN4-201ENST00000299162 MAP7D2Q96T17 732 aa11.94□□□□□ -0.5
FOXN4-201ENST00000299162 NOL7Q9UMY1 257 aaKnown RBP11.94□□□□□ -0.5
FOXN4-201ENST00000299162 CPDO75976 1380 aa11.94□□□□□ -0.5
FOXN4-201ENST00000299162 TCHHQ07283 1943 aa11.94□□□□□ -0.5
FOXN4-201ENST00000299162 FAM182BQ5T319 152 aa11.94□□□□□ -0.5
FOXN4-201ENST00000299162 STOX1Q6ZVD7 989 aa11.94□□□□□ -0.5
FOXN4-201ENST00000299162 TTC12Q9H892 705 aaPredicted RBP11.94□□□□□ -0.5
FOXN4-201ENST00000299162 USP54Q70EL1 1684 aa11.94□□□□□ -0.5
FOXN4-201ENST00000299162 ALS2Q96Q42 1657 aa11.94□□□□□ -0.5
FOXN4-201ENST00000299162 LRSAM1Q6UWE0 723 aa11.93□□□□□ -0.5
FOXN4-201ENST00000299162 TEX2Q8IWB9 1127 aa11.93□□□□□ -0.5
FOXN4-201ENST00000299162 CCDC24Q8N4L8 307 aa11.93□□□□□ -0.5
FOXN4-201ENST00000299162 KIF1AQ12756 1690 aa11.93□□□□□ -0.5
FOXN4-201ENST00000299162 M0R2C6 588 aa11.93□□□□□ -0.5
FOXN4-201ENST00000299162 IRS4O14654 1257 aaPredicted RBP11.93□□□□□ -0.5
FOXN4-201ENST00000299162 CKAP2LQ8IYA6 745 aa11.93□□□□□ -0.5
FOXN4-201ENST00000299162 TSPY26PQ9H489 355 aa11.93□□□□□ -0.5
FOXN4-201ENST00000299162 ZNF445P59923 1031 aa11.93□□□□□ -0.5
FOXN4-201ENST00000299162 DZIP3Q86Y13 1208 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms