RNA–Protein interactions for RNA: ENST00000297904.3

VEGFD-201, Transcript of vascular endothelial growth factor D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFD, Length 2,037 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFD-201ENST00000297904 LAMC1P11047 1609 aa8.28□□□□□ -1.08
VEGFD-201ENST00000297904 SH3BP5O60239 455 aa8.28□□□□□ -1.08
VEGFD-201ENST00000297904 CDC45O75419 566 aa8.28□□□□□ -1.08
VEGFD-201ENST00000297904 RAPGEF3O95398 923 aa8.28□□□□□ -1.08
VEGFD-201ENST00000297904 SSBP05455 408 aaKnown RBP eCLIP8.28□□□□□ -1.08
VEGFD-201ENST00000297904 PTPN12Q05209 780 aaKnown RBP8.28□□□□□ -1.08
VEGFD-201ENST00000297904 ARSIQ5FYB1 569 aa8.28□□□□□ -1.08
VEGFD-201ENST00000297904 SCG3Q8WXD2 468 aaKnown RBP8.28□□□□□ -1.08
VEGFD-201ENST00000297904 ANP32BQ92688 251 aaKnown RBP8.28□□□□□ -1.08
VEGFD-201ENST00000297904 GBP4Q96PP9 640 aa8.28□□□□□ -1.08
VEGFD-201ENST00000297904 ARHGAP9Q9BRR9 750 aa8.28□□□□□ -1.08
VEGFD-201ENST00000297904 SNTG2Q9NY99 539 aa8.28□□□□□ -1.08
VEGFD-201ENST00000297904 KIAA1468Q9P260 1216 aa8.28□□□□□ -1.08
VEGFD-201ENST00000297904 SHANK2Q9UPX8 1470 aa8.28□□□□□ -1.08
VEGFD-201ENST00000297904 ARHGEF40Q8TER5 1519 aa8.28□□□□□ -1.08
VEGFD-201ENST00000297904 CDC42BPBQ9Y5S2 1711 aa8.27□□□□□ -1.08
VEGFD-201ENST00000297904 C19orf67A6NJJ6 358 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 FOXO3O43524 673 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 PTMSP20962 102 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 IGFBP4P22692 258 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 Q3C1V9 767 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 DZIP3Q86Y13 1208 aaKnown RBP8.27□□□□□ -1.09
VEGFD-201ENST00000297904 PRPF38AQ8NAV1 312 aaKnown RBP8.27□□□□□ -1.09
VEGFD-201ENST00000297904 USB1Q9BQ65 265 aaKnown RBP8.27□□□□□ -1.09
VEGFD-201ENST00000297904 V9GY48 417 aaPredicted RBP8.27□□□□□ -1.09
VEGFD-201ENST00000297904 POGZQ7Z3K3 1410 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 SCAPERQ9BY12 1400 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 A2MP01023 1474 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 RNF40O75150 1001 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 CCDC173Q0VFZ6 552 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 PPP4R3BQ5MIZ7 849 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 RNF20Q5VTR2 975 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 ZBTB33Q86T24 672 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 FERMT3Q86UX7 667 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 MKL1Q969V6 931 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 SEPT9Q9UHD8 586 aaPredicted RBP8.27□□□□□ -1.09
VEGFD-201ENST00000297904 MRVI1Q9Y6F6 885 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 CDC42BPAQ5VT25 1732 aa8.27□□□□□ -1.09
VEGFD-201ENST00000297904 FAM221BA6H8Z2 402 aa8.26□□□□□ -1.09
VEGFD-201ENST00000297904 MSNP26038 577 aaKnown RBP8.26□□□□□ -1.09
VEGFD-201ENST00000297904 HNRNPMP52272 730 aaKnown RBP eCLIP8.26□□□□□ -1.09
VEGFD-201ENST00000297904 RARSP54136 660 aaKnown RBP8.26□□□□□ -1.09
VEGFD-201ENST00000297904 PTPRNQ16849 979 aa8.26□□□□□ -1.09
VEGFD-201ENST00000297904 GAS2L3Q86XJ1 694 aa8.26□□□□□ -1.09
VEGFD-201ENST00000297904 SH3TC2Q8TF17 1288 aa8.26□□□□□ -1.09
VEGFD-201ENST00000297904 THRAP3Q9Y2W1 955 aaKnown RBP8.26□□□□□ -1.09
VEGFD-201ENST00000297904 FAM135AQ9P2D6 1515 aa8.26□□□□□ -1.09
VEGFD-201ENST00000297904 ZNF518AQ6AHZ1 1483 aa8.26□□□□□ -1.09
VEGFD-201ENST00000297904 EIF2AK4Q9P2K8 1649 aaKnown RBP8.26□□□□□ -1.09
VEGFD-201ENST00000297904 M0R2N6 131 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 ZBTB39O15060 712 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 CALD1Q05682 793 aaKnown RBP8.25□□□□□ -1.09
VEGFD-201ENST00000297904 MEI1Q5TIA1 1274 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 ALKBH2Q6NS38 261 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 RAVER1Q8IY67 606 aaKnown RBP8.25□□□□□ -1.09
VEGFD-201ENST00000297904 TNPO1Q92973 898 aaKnown RBP8.25□□□□□ -1.09
VEGFD-201ENST00000297904 TRIM55Q9BYV6 548 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 PRDM10Q9NQV6 1147 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 STIM2Q9P246 746 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 PNMA2Q9UL42 364 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 ZFYVE16Q7Z3T8 1539 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 ASXL1Q8IXJ9 1541 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 TNFRSF10BO14763 440 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 MAFGO15525 162 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 ETFBP38117 255 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 APLP1P51693 650 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 USP4Q13107 963 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 ANKS3Q6ZW76 656 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 ZSCAN30Q86W11 494 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 TSR2Q969E8 191 aaKnown RBP8.25□□□□□ -1.09
VEGFD-201ENST00000297904 DEPDC7Q96QD5 511 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 CARD14Q9BXL6 1004 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 C12orf49Q9H741 205 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 ZNF358Q9NW07 568 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 LHX6Q9UPM6 363 aa8.25□□□□□ -1.09
VEGFD-201ENST00000297904 ABCC1P33527 1531 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 OFD1O75665 1012 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 RLBP1P12271 317 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 GYS2P54840 703 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 RASA3Q14644 834 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 C4orf46Q504U0 113 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 NBPF14Q5TI25 921 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.24□□□□□ -1.09
VEGFD-201ENST00000297904 FRMD6Q96NE9 622 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 COPRSQ9NQ92 184 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 POLIQ9UNA4 740 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 HSP90AB1P08238 724 aaKnown RBP8.24□□□□□ -1.09
VEGFD-201ENST00000297904 EIF4BP23588 611 aaKnown RBP8.24□□□□□ -1.09
VEGFD-201ENST00000297904 NASPP49321 788 aaPredicted RBP8.24□□□□□ -1.09
VEGFD-201ENST00000297904 HDGFP51858 240 aaKnown RBP8.24□□□□□ -1.09
VEGFD-201ENST00000297904 TERF1P54274 439 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 RBM10P98175 930 aaKnown RBP8.24□□□□□ -1.09
VEGFD-201ENST00000297904 ORC1Q13415 861 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 ZFYVE27Q5T4F4 411 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 PPP1R9BQ96SB3 815 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 MAP7D2Q96T17 732 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 SIRPGQ9P1W8 387 aa8.24□□□□□ -1.09
VEGFD-201ENST00000297904 CCDC141Q6ZP82 1450 aa8.23□□□□□ -1.09
VEGFD-201ENST00000297904 NPC1L1Q9UHC9 1359 aa8.23□□□□□ -1.09
VEGFD-201ENST00000297904 PLXNC1O60486 1568 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms