RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 BCL2L12Q9HB09 334 aa16.39■□□□□ 0.21
CHMP4C-201ENST00000297265 PAG1Q9NWQ8 432 aa16.39■□□□□ 0.21
CHMP4C-201ENST00000297265 RBM8AQ9Y5S9 174 aaKnown RBP16.39■□□□□ 0.21
CHMP4C-201ENST00000297265 FAM177BA6PVY3 158 aa16.38■□□□□ 0.21
CHMP4C-201ENST00000297265 GOLIM4O00461 696 aa16.38■□□□□ 0.21
CHMP4C-201ENST00000297265 MCM4P33991 863 aa16.38■□□□□ 0.21
CHMP4C-201ENST00000297265 MCM2P49736 904 aa16.38■□□□□ 0.21
CHMP4C-201ENST00000297265 RC3H1Q5TC82 1133 aaKnown RBP16.38■□□□□ 0.21
CHMP4C-201ENST00000297265 MEX3CQ5U5Q3 659 aaKnown RBP16.38■□□□□ 0.21
CHMP4C-201ENST00000297265 PRPF40BQ6NWY9 871 aaKnown RBP16.38■□□□□ 0.21
CHMP4C-201ENST00000297265 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
CHMP4C-201ENST00000297265 LY75O60449 1722 aa16.38■□□□□ 0.21
CHMP4C-201ENST00000297265 IFIT1P09914 478 aaKnown RBP16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 SCARF1Q14162 830 aa16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 USPL1Q5W0Q7 1092 aa16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 CREB3L3Q68CJ9 461 aa16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 SPEF2Q9C093 1822 aa16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 LAMB2P55268 1798 aa16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 PDE8BO95263 885 aa16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 CYP2E1P05181 493 aaPredicted RBP16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 IL27Q8NEV9 243 aa16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 SEC31BQ9NQW1 1179 aa16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 TAF6LQ9Y6J9 622 aa16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 AKAP11Q9UKA4 1901 aa16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 COL4A1P02462 1669 aa16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
CHMP4C-201ENST00000297265 RPS6KA4O75676 772 aa16.36■□□□□ 0.21
CHMP4C-201ENST00000297265 CPA1P15085 419 aa16.36■□□□□ 0.21
CHMP4C-201ENST00000297265 PKP1Q13835 747 aa16.36■□□□□ 0.21
CHMP4C-201ENST00000297265 METTL24Q5JXM2 366 aa16.36■□□□□ 0.21
CHMP4C-201ENST00000297265 TICAM2Q86XR7 235 aa16.36■□□□□ 0.21
CHMP4C-201ENST00000297265 SEPT12Q8IYM1 358 aa16.36■□□□□ 0.21
CHMP4C-201ENST00000297265 TM6SF1Q9BZW5 370 aa16.36■□□□□ 0.21
CHMP4C-201ENST00000297265 ZSWIM6Q9HCJ5 1215 aa16.36■□□□□ 0.21
CHMP4C-201ENST00000297265 CNNM1Q9NRU3 951 aa16.36■□□□□ 0.21
CHMP4C-201ENST00000297265 TRPC5Q9UL62 973 aaPredicted RBP16.36■□□□□ 0.21
CHMP4C-201ENST00000297265 SLC27A2O14975 620 aa16.35■□□□□ 0.21
CHMP4C-201ENST00000297265 ATP2B3Q16720 1220 aa16.35■□□□□ 0.21
CHMP4C-201ENST00000297265 CCDC129Q6ZRS4 1044 aa16.35■□□□□ 0.21
CHMP4C-201ENST00000297265 RGL2O15211 777 aa16.35■□□□□ 0.21
CHMP4C-201ENST00000297265 FGFR2P21802 821 aa16.35■□□□□ 0.21
CHMP4C-201ENST00000297265 MCMDC2Q4G0Z9 681 aa16.35■□□□□ 0.21
CHMP4C-201ENST00000297265 CCDC158Q5M9N0 1113 aa16.35■□□□□ 0.21
CHMP4C-201ENST00000297265 CWC22Q9HCG8 908 aaKnown RBP16.35■□□□□ 0.21
CHMP4C-201ENST00000297265 SCN7AQ01118 1682 aa16.35■□□□□ 0.21
CHMP4C-201ENST00000297265 RTL9Q8NET4 1388 aa16.34■□□□□ 0.21
CHMP4C-201ENST00000297265 RPAP1Q9BWH6 1393 aaPredicted RBP16.34■□□□□ 0.21
CHMP4C-201ENST00000297265 CASTP20810 708 aaKnown RBP16.34■□□□□ 0.21
CHMP4C-201ENST00000297265 SSFA2P28290 1259 aa16.34■□□□□ 0.21
CHMP4C-201ENST00000297265 AK2P54819 239 aa16.34■□□□□ 0.21
CHMP4C-201ENST00000297265 TSGA10IPQ3SY00 556 aa16.34■□□□□ 0.21
CHMP4C-201ENST00000297265 ZMYM1Q5SVZ6 1142 aa16.34■□□□□ 0.21
CHMP4C-201ENST00000297265 CLEC17AQ6ZS10 378 aa16.34■□□□□ 0.21
CHMP4C-201ENST00000297265 RUFY3Q7L099 469 aa16.34■□□□□ 0.21
CHMP4C-201ENST00000297265 ZNF652Q9Y2D9 606 aa16.34■□□□□ 0.21
CHMP4C-201ENST00000297265 ZDHHC9Q9Y397 364 aa16.34■□□□□ 0.21
CHMP4C-201ENST00000297265 TBC1D9BQ66K14 1250 aa16.33■□□□□ 0.21
CHMP4C-201ENST00000297265 PI16Q6UXB8 463 aa16.33■□□□□ 0.21
CHMP4C-201ENST00000297265 C3orf67Q6ZVT6 689 aa16.33■□□□□ 0.21
CHMP4C-201ENST00000297265 ZNF512BQ96KM6 892 aaPredicted RBP16.33■□□□□ 0.21
CHMP4C-201ENST00000297265 NARFQ9UHQ1 456 aa16.33■□□□□ 0.21
CHMP4C-201ENST00000297265 CCNL1Q9UK58 526 aaPredicted RBP16.33■□□□□ 0.21
CHMP4C-201ENST00000297265 ABCC12Q96J65 1359 aa16.33■□□□□ 0.2
CHMP4C-201ENST00000297265 MCAMP43121 646 aa16.33■□□□□ 0.2
CHMP4C-201ENST00000297265 ZAP70P43403 619 aa16.33■□□□□ 0.2
CHMP4C-201ENST00000297265 ERFEQ4G0M1 354 aa16.33■□□□□ 0.2
CHMP4C-201ENST00000297265 TTC39AQ5SRH9 613 aa16.33■□□□□ 0.2
CHMP4C-201ENST00000297265 NOL8Q76FK4 1167 aaKnown RBP16.33■□□□□ 0.2
CHMP4C-201ENST00000297265 HELBQ8NG08 1087 aaPredicted RBP16.33■□□□□ 0.2
CHMP4C-201ENST00000297265 INTS4Q96HW7 963 aaKnown RBP16.33■□□□□ 0.2
CHMP4C-201ENST00000297265 JAKMIP1Q96N16 626 aaKnown RBP16.33■□□□□ 0.2
CHMP4C-201ENST00000297265 QTRT2Q9H974 415 aaKnown RBP16.33■□□□□ 0.2
CHMP4C-201ENST00000297265 HELLSQ9NRZ9 838 aa16.33■□□□□ 0.2
CHMP4C-201ENST00000297265 SRP68Q9UHB9 627 aaKnown RBP16.33■□□□□ 0.2
CHMP4C-201ENST00000297265 CASZ1Q86V15 1759 aa16.32■□□□□ 0.2
CHMP4C-201ENST00000297265 SNAP23O00161 211 aa16.32■□□□□ 0.2
CHMP4C-201ENST00000297265 DEKP35659 375 aaKnown RBP16.32■□□□□ 0.2
CHMP4C-201ENST00000297265 FKBP4Q02790 459 aaKnown RBP eCLIP16.32■□□□□ 0.2
CHMP4C-201ENST00000297265 MROH5Q6ZUA9 1318 aa16.32■□□□□ 0.2
CHMP4C-201ENST00000297265 RNF113AO15541 343 aaKnown RBP16.31■□□□□ 0.2
CHMP4C-201ENST00000297265 CCDC152Q4G0S7 254 aa16.31■□□□□ 0.2
CHMP4C-201ENST00000297265 GORABQ5T7V8 394 aa16.31■□□□□ 0.2
CHMP4C-201ENST00000297265 VPS53Q5VIR6 699 aa16.31■□□□□ 0.2
CHMP4C-201ENST00000297265 LARP6Q9BRS8 491 aaKnown RBP16.31■□□□□ 0.2
CHMP4C-201ENST00000297265 LRRC4BQ9NT99 713 aa16.31■□□□□ 0.2
CHMP4C-201ENST00000297265 ARAP2Q8WZ64 1704 aa16.31■□□□□ 0.2
CHMP4C-201ENST00000297265 TAF1P21675 1872 aa16.31■□□□□ 0.2
CHMP4C-201ENST00000297265 GNPATO15228 680 aa16.31■□□□□ 0.2
CHMP4C-201ENST00000297265 ZKSCAN1P17029 563 aaPredicted RBP16.31■□□□□ 0.2
CHMP4C-201ENST00000297265 SLC10A5Q5PT55 438 aa16.31■□□□□ 0.2
CHMP4C-201ENST00000297265 ARHGEF1Q92888 912 aaKnown RBP16.31■□□□□ 0.2
CHMP4C-201ENST00000297265 OSBP2Q969R2 916 aa16.31■□□□□ 0.2
CHMP4C-201ENST00000297265 MAST3O60307 1309 aa16.3■□□□□ 0.2
CHMP4C-201ENST00000297265 SF3B3Q15393 1217 aaKnown RBP16.3■□□□□ 0.2
CHMP4C-201ENST00000297265 CCDC102BQ68D86 513 aa16.3■□□□□ 0.2
CHMP4C-201ENST00000297265 BCL11BQ9C0K0 894 aaPredicted RBP16.3■□□□□ 0.2
CHMP4C-201ENST00000297265 MYO5AQ9Y4I1 1855 aaKnown RBP16.3■□□□□ 0.2
CHMP4C-201ENST00000297265 C4BP0C0L5 1744 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 COL24A1Q17RW2 1714 aa16.29■□□□□ 0.2
CHMP4C-201ENST00000297265 FOXP2O15409 715 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms