RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 GOLPH3LQ9H4A5 285 aa11.97□□□□□ -0.49
CCDC36-201ENST00000296449 RCOR1Q9UKL0 485 aa11.97□□□□□ -0.49
CCDC36-201ENST00000296449 RGPD2P0DJD1 1756 aa11.97□□□□□ -0.49
CCDC36-201ENST00000296449 NCAPD2Q15021 1401 aa11.96□□□□□ -0.49
CCDC36-201ENST00000296449 CHGBP05060 677 aa11.96□□□□□ -0.49
CCDC36-201ENST00000296449 CYP21A2P08686 494 aa11.96□□□□□ -0.49
CCDC36-201ENST00000296449 ATP5JP18859 108 aa11.96□□□□□ -0.49
CCDC36-201ENST00000296449 PDIA6Q15084 440 aa11.96□□□□□ -0.49
CCDC36-201ENST00000296449 AMOTQ4VCS5 1084 aa11.96□□□□□ -0.49
CCDC36-201ENST00000296449 C1orf141Q5JVX7 400 aa11.96□□□□□ -0.49
CCDC36-201ENST00000296449 EPHA10Q5JZY3 1008 aa11.96□□□□□ -0.49
CCDC36-201ENST00000296449 CCDC129Q6ZRS4 1044 aa11.96□□□□□ -0.49
CCDC36-201ENST00000296449 CCAR1Q8IX12 1150 aaKnown RBP11.96□□□□□ -0.49
CCDC36-201ENST00000296449 DDX21Q9NR30 783 aaKnown RBP eCLIP11.96□□□□□ -0.49
CCDC36-201ENST00000296449 DBNLQ9UJU6 430 aaKnown RBP11.96□□□□□ -0.49
CCDC36-201ENST00000296449 USP16Q9Y5T5 823 aa11.96□□□□□ -0.49
CCDC36-201ENST00000296449 MYH15Q9Y2K3 1946 aa11.96□□□□□ -0.49
CCDC36-201ENST00000296449 ZNF609O15014 1411 aa11.96□□□□□ -0.49
CCDC36-201ENST00000296449 SKILP12757 684 aa11.96□□□□□ -0.5
CCDC36-201ENST00000296449 GABPB1Q06547 395 aaPredicted RBP11.96□□□□□ -0.5
CCDC36-201ENST00000296449 SNW1Q13573 536 aaKnown RBP11.96□□□□□ -0.5
CCDC36-201ENST00000296449 DHX40Q8IX18 779 aaKnown RBP11.96□□□□□ -0.5
CCDC36-201ENST00000296449 LRRC2Q9BYS8 371 aa11.96□□□□□ -0.5
CCDC36-201ENST00000296449 NDUFB9Q9Y6M9 179 aa11.96□□□□□ -0.5
CCDC36-201ENST00000296449 U3KPZ7 1027 aaPredicted RBP11.96□□□□□ -0.5
CCDC36-201ENST00000296449 A0A087WWV3 80 aa11.95□□□□□ -0.5
CCDC36-201ENST00000296449 CCZ1BP86790 482 aa11.95□□□□□ -0.5
CCDC36-201ENST00000296449 CCZ1P86791 482 aaPredicted RBP11.95□□□□□ -0.5
CCDC36-201ENST00000296449 NAA16Q6N069 864 aaPredicted RBP11.95□□□□□ -0.5
CCDC36-201ENST00000296449 SEC62Q99442 399 aaKnown RBP11.95□□□□□ -0.5
CCDC36-201ENST00000296449 LLPHQ9BRT6 129 aaKnown RBP11.95□□□□□ -0.5
CCDC36-201ENST00000296449 PHF8Q9UPP1 1060 aa11.95□□□□□ -0.5
CCDC36-201ENST00000296449 RFX7Q2KHR2 1363 aa11.95□□□□□ -0.5
CCDC36-201ENST00000296449 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.95□□□□□ -0.5
CCDC36-201ENST00000296449 CCDC69A6NI79 296 aa11.95□□□□□ -0.5
CCDC36-201ENST00000296449 PFKFB2O60825 505 aa11.95□□□□□ -0.5
CCDC36-201ENST00000296449 PTPN14Q15678 1187 aa11.95□□□□□ -0.5
CCDC36-201ENST00000296449 NSUN7Q8NE18 718 aaKnown RBP11.95□□□□□ -0.5
CCDC36-201ENST00000296449 KIF18AQ8NI77 898 aa11.95□□□□□ -0.5
CCDC36-201ENST00000296449 KCND1Q9NSA2 647 aa11.95□□□□□ -0.5
CCDC36-201ENST00000296449 ZNF215Q9UL58 517 aaPredicted RBP11.95□□□□□ -0.5
CCDC36-201ENST00000296449 MORC2Q9Y6X9 1032 aaPredicted RBP11.95□□□□□ -0.5
CCDC36-201ENST00000296449 PHRF1Q9P1Y6 1649 aaKnown RBP11.95□□□□□ -0.5
CCDC36-201ENST00000296449 NEURL1BA8MQ27 555 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 BECN2A8MW95 431 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 STOX1Q6ZVD7 989 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 FILIP1Q7Z7B0 1213 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 ENGASEQ8NFI3 743 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 USP28Q96RU2 1077 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 BCL11BQ9C0K0 894 aaPredicted RBP11.94□□□□□ -0.5
CCDC36-201ENST00000296449 CTDNEP1O95476 244 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 FOSBP53539 338 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 GCKRQ14397 625 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 TNNI3KQ59H18 835 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 CCDC73Q6ZRK6 1079 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 COPRSQ9NQ92 184 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 FPGT-TNNI3KV9GXZ4 949 aa11.94□□□□□ -0.5
CCDC36-201ENST00000296449 KINO60870 393 aaKnown RBP11.93□□□□□ -0.5
CCDC36-201ENST00000296449 FAM160A1Q05DH4 1040 aa11.93□□□□□ -0.5
CCDC36-201ENST00000296449 TFCP2Q12800 502 aa11.93□□□□□ -0.5
CCDC36-201ENST00000296449 MCMDC2Q4G0Z9 681 aa11.93□□□□□ -0.5
CCDC36-201ENST00000296449 ANO10Q9NW15 660 aa11.93□□□□□ -0.5
CCDC36-201ENST00000296449 PTPDC1A2A3K4 754 aa11.93□□□□□ -0.5
CCDC36-201ENST00000296449 KMT5BQ4FZB7 885 aa11.93□□□□□ -0.5
CCDC36-201ENST00000296449 ATL3Q6DD88 541 aa11.93□□□□□ -0.5
CCDC36-201ENST00000296449 CCAR2Q8N163 923 aaKnown RBP11.93□□□□□ -0.5
CCDC36-201ENST00000296449 ZNF397Q8NF99 534 aaPredicted RBP11.93□□□□□ -0.5
CCDC36-201ENST00000296449 DNAJC2Q99543 621 aaKnown RBP11.93□□□□□ -0.5
CCDC36-201ENST00000296449 TRMT1Q9NXH9 659 aaKnown RBP11.93□□□□□ -0.5
CCDC36-201ENST00000296449 RFX5P48382 616 aaPredicted RBP11.92□□□□□ -0.5
CCDC36-201ENST00000296449 PTPN12Q05209 780 aaKnown RBP11.92□□□□□ -0.5
CCDC36-201ENST00000296449 NEXNQ0ZGT2 675 aa11.92□□□□□ -0.5
CCDC36-201ENST00000296449 KCNH5Q8NCM2 988 aa11.92□□□□□ -0.5
CCDC36-201ENST00000296449 APOBRQ0VD83 1088 aa11.92□□□□□ -0.5
CCDC36-201ENST00000296449 DHX32Q7L7V1 743 aaKnown RBP11.92□□□□□ -0.5
CCDC36-201ENST00000296449 CEP57L1Q8IYX8 460 aa11.92□□□□□ -0.5
CCDC36-201ENST00000296449 AOPEPQ8N6M6 819 aa11.92□□□□□ -0.5
CCDC36-201ENST00000296449 FSIP1Q8NA03 581 aa11.92□□□□□ -0.5
CCDC36-201ENST00000296449 ERCC4Q92889 916 aaPredicted RBP11.92□□□□□ -0.5
CCDC36-201ENST00000296449 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCDC36-201ENST00000296449 V9GYY5 206 aaPredicted RBP11.92□□□□□ -0.5
CCDC36-201ENST00000296449 LMTK3Q96Q04 1460 aa11.92□□□□□ -0.5
CCDC36-201ENST00000296449 SIPA1L3O60292 1781 aaPredicted RBP11.91□□□□□ -0.5
CCDC36-201ENST00000296449 TULP1O00294 542 aaPredicted RBP11.91□□□□□ -0.5
CCDC36-201ENST00000296449 HMGB1P09429 215 aaKnown RBP11.91□□□□□ -0.5
CCDC36-201ENST00000296449 TAF3Q5VWG9 929 aa11.91□□□□□ -0.5
CCDC36-201ENST00000296449 DDX46Q7L014 1031 aaKnown RBP11.91□□□□□ -0.5
CCDC36-201ENST00000296449 ZNF771Q7L3S4 317 aaPredicted RBP11.91□□□□□ -0.5
CCDC36-201ENST00000296449 HOMEZQ8IX15 550 aa11.91□□□□□ -0.5
CCDC36-201ENST00000296449 ZNF396Q96N95 335 aaPredicted RBP11.91□□□□□ -0.5
CCDC36-201ENST00000296449 MYD88Q99836 296 aa11.91□□□□□ -0.5
CCDC36-201ENST00000296449 HAUS7Q99871 368 aa11.91□□□□□ -0.5
CCDC36-201ENST00000296449 DBNDD2Q9BQY9 259 aa11.91□□□□□ -0.5
CCDC36-201ENST00000296449 ERBB3P21860 1342 aa11.91□□□□□ -0.5
CCDC36-201ENST00000296449 KIF2AO00139 706 aaPredicted RBP11.91□□□□□ -0.5
CCDC36-201ENST00000296449 SLFN14P0C7P3 912 aa11.91□□□□□ -0.5
CCDC36-201ENST00000296449 MYL6BP14649 208 aa11.91□□□□□ -0.5
CCDC36-201ENST00000296449 ME1P48163 572 aa11.91□□□□□ -0.5
CCDC36-201ENST00000296449 SLFNL1Q499Z3 407 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms