RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 RNF20Q5VTR2 975 aa14.04□□□□□ -0.16
RHO-201ENST00000296271 LARP1BQ659C4 914 aaKnown RBP14.04□□□□□ -0.16
RHO-201ENST00000296271 NEK1Q96PY6 1258 aa14.04□□□□□ -0.16
RHO-201ENST00000296271 GREM2Q9H772 168 aa14.04□□□□□ -0.16
RHO-201ENST00000296271 ESPNB1AK53 854 aa14.04□□□□□ -0.16
RHO-201ENST00000296271 PSMA5P28066 241 aa14.04□□□□□ -0.16
RHO-201ENST00000296271 TRIM44Q96DX7 344 aaPredicted RBP14.04□□□□□ -0.16
RHO-201ENST00000296271 ACSBG1Q96GR2 724 aa14.04□□□□□ -0.16
RHO-201ENST00000296271 GPHNQ9NQX3 736 aaPredicted RBP14.04□□□□□ -0.16
RHO-201ENST00000296271 SH2B1Q9NRF2 756 aaPredicted RBP14.04□□□□□ -0.16
RHO-201ENST00000296271 TFIP11Q9UBB9 837 aaKnown RBP14.04□□□□□ -0.16
RHO-201ENST00000296271 MBD3O95983 291 aa14.03□□□□□ -0.16
RHO-201ENST00000296271 BRF1Q92994 677 aa14.03□□□□□ -0.16
RHO-201ENST00000296271 OSBP2Q969R2 916 aa14.03□□□□□ -0.16
RHO-201ENST00000296271 XAGE2Q96GT9 111 aa14.03□□□□□ -0.16
RHO-201ENST00000296271 ZSCAN31Q96LW9 406 aaPredicted RBP14.03□□□□□ -0.16
RHO-201ENST00000296271 KIF6Q6ZMV9 814 aa14.03□□□□□ -0.16
RHO-201ENST00000296271 CEP126Q9P2H0 1117 aa14.03□□□□□ -0.16
RHO-201ENST00000296271 ITGB4P16144 1822 aa14.03□□□□□ -0.16
RHO-201ENST00000296271 MAST3O60307 1309 aa14.03□□□□□ -0.16
RHO-201ENST00000296271 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.02□□□□□ -0.16
RHO-201ENST00000296271 CYP19A1P11511 503 aaPredicted RBP14.02□□□□□ -0.16
RHO-201ENST00000296271 HAND2P61296 217 aa14.02□□□□□ -0.16
RHO-201ENST00000296271 HELBQ8NG08 1087 aaPredicted RBP14.02□□□□□ -0.16
RHO-201ENST00000296271 PPP1R9BQ96SB3 815 aa14.02□□□□□ -0.16
RHO-201ENST00000296271 PLEKHG2Q9H7P9 1386 aa14.02□□□□□ -0.16
RHO-201ENST00000296271 HSPD1P10809 573 aaKnown RBP14.02□□□□□ -0.17
RHO-201ENST00000296271 ZAP70P43403 619 aa14.02□□□□□ -0.17
RHO-201ENST00000296271 TAF7LQ5H9L4 462 aa14.02□□□□□ -0.17
RHO-201ENST00000296271 NLRP10Q86W26 655 aa14.02□□□□□ -0.17
RHO-201ENST00000296271 MAP3K15Q6ZN16 1313 aa14.01□□□□□ -0.17
RHO-201ENST00000296271 FOXP2O15409 715 aa14.01□□□□□ -0.17
RHO-201ENST00000296271 HSP90B1P14625 803 aaKnown RBP14.01□□□□□ -0.17
RHO-201ENST00000296271 APOBRQ0VD83 1088 aa14.01□□□□□ -0.17
RHO-201ENST00000296271 ZMYM1Q5SVZ6 1142 aa14.01□□□□□ -0.17
RHO-201ENST00000296271 GORABQ5T7V8 394 aa14.01□□□□□ -0.17
RHO-201ENST00000296271 GIGYF2Q6Y7W6 1299 aaKnown RBP14.01□□□□□ -0.17
RHO-201ENST00000296271 NCOA5Q9HCD5 579 aaKnown RBP14.01□□□□□ -0.17
RHO-201ENST00000296271 STARD3NLO95772 234 aa14.01□□□□□ -0.17
RHO-201ENST00000296271 ITGA6P23229 1130 aa14.01□□□□□ -0.17
RHO-201ENST00000296271 CCT2P78371 535 aaKnown RBP14.01□□□□□ -0.17
RHO-201ENST00000296271 CCDC173Q0VFZ6 552 aa14.01□□□□□ -0.17
RHO-201ENST00000296271 TSGA10IPQ3SY00 556 aa14.01□□□□□ -0.17
RHO-201ENST00000296271 GIMAP6Q6P9H5 292 aa14.01□□□□□ -0.17
RHO-201ENST00000296271 TTC6Q86TZ1 520 aa14.01□□□□□ -0.17
RHO-201ENST00000296271 ZBTB38Q8NAP3 1195 aaPredicted RBP14.01□□□□□ -0.17
RHO-201ENST00000296271 NKX2-3Q8TAU0 364 aa14.01□□□□□ -0.17
RHO-201ENST00000296271 NAP1L2Q9ULW6 460 aaPredicted RBP14.01□□□□□ -0.17
RHO-201ENST00000296271 NHSL1Q5SYE7 1610 aa14.01□□□□□ -0.17
RHO-201ENST00000296271 PCCAP05165 728 aaPredicted RBP14□□□□□ -0.17
RHO-201ENST00000296271 SMIM5Q71RC9 77 aa14□□□□□ -0.17
RHO-201ENST00000296271 RAB11FIP4Q86YS3 637 aa14□□□□□ -0.17
RHO-201ENST00000296271 TTLL11Q8NHH1 800 aa14□□□□□ -0.17
RHO-201ENST00000296271 DENND2AQ9ULE3 1009 aa14□□□□□ -0.17
RHO-201ENST00000296271 UBN2Q6ZU65 1347 aa14□□□□□ -0.17
RHO-201ENST00000296271 SCRN1Q12765 414 aa14□□□□□ -0.17
RHO-201ENST00000296271 IFIT5Q13325 482 aaKnown RBP14□□□□□ -0.17
RHO-201ENST00000296271 TTC39AQ5SRH9 613 aa14□□□□□ -0.17
RHO-201ENST00000296271 PUS7LQ9H0K6 701 aaKnown RBP14□□□□□ -0.17
RHO-201ENST00000296271 HMG20BQ9P0W2 317 aa14□□□□□ -0.17
RHO-201ENST00000296271 U3KPZ7 1027 aaPredicted RBP14□□□□□ -0.17
RHO-201ENST00000296271 PALLDQ8WX93 1383 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 SH3TC1Q8TE82 1336 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 EXOC5O00471 708 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 RNF113AO15541 343 aaKnown RBP13.99□□□□□ -0.17
RHO-201ENST00000296271 CSF1RP07333 972 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 WASHC4Q2M389 1173 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 LDHAL6AQ6ZMR3 332 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 TMEM87AQ8NBN3 555 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 TSPY26PQ9H489 355 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 GPR108Q9NPR9 543 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 TRMT112Q9UI30 125 aaKnown RBP13.99□□□□□ -0.17
RHO-201ENST00000296271 BCL9O00512 1426 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 CIAO1O76071 339 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 HCLS1P14317 486 aaPredicted RBP13.99□□□□□ -0.17
RHO-201ENST00000296271 KCNQ4P56696 695 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 FGD1P98174 961 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 LAMA4Q16363 1823 aa13.99□□□□□ -0.17
RHO-201ENST00000296271 E7EWF7 191 aa13.98□□□□□ -0.17
RHO-201ENST00000296271 IRS4O14654 1257 aaPredicted RBP13.98□□□□□ -0.17
RHO-201ENST00000296271 METTL24Q5JXM2 366 aa13.98□□□□□ -0.17
RHO-201ENST00000296271 GTF3C6Q969F1 213 aa13.98□□□□□ -0.17
RHO-201ENST00000296271 NUTM2BA6NNL0 878 aaPredicted RBP13.98□□□□□ -0.17
RHO-201ENST00000296271 NUTM2EB1AL46 878 aaPredicted RBP13.98□□□□□ -0.17
RHO-201ENST00000296271 CLCN1P35523 988 aa13.98□□□□□ -0.17
RHO-201ENST00000296271 MCAMP43121 646 aa13.98□□□□□ -0.17
RHO-201ENST00000296271 UBE2HP62256 183 aa13.98□□□□□ -0.17
RHO-201ENST00000296271 NUTM2AQ8IVF1 878 aaPredicted RBP13.98□□□□□ -0.17
RHO-201ENST00000296271 FTOQ9C0B1 505 aaKnown RBP eCLIP13.98□□□□□ -0.17
RHO-201ENST00000296271 RIPOR2Q9Y4F9 1068 aa13.98□□□□□ -0.17
RHO-201ENST00000296271 DISP2A7MBM2 1401 aa13.98□□□□□ -0.17
RHO-201ENST00000296271 RIC1Q4ADV7 1423 aa13.98□□□□□ -0.17
RHO-201ENST00000296271 CTDNEP1O95476 244 aa13.97□□□□□ -0.17
RHO-201ENST00000296271 LIG1P18858 919 aa13.97□□□□□ -0.17
RHO-201ENST00000296271 GUCY1B3Q02153 619 aa13.97□□□□□ -0.17
RHO-201ENST00000296271 CEBPZQ03701 1054 aaKnown RBP13.97□□□□□ -0.17
RHO-201ENST00000296271 TRIM28Q13263 835 aaKnown RBP13.97□□□□□ -0.17
RHO-201ENST00000296271 CAMK4Q16566 473 aa13.97□□□□□ -0.17
RHO-201ENST00000296271 DZIP3Q86Y13 1208 aaKnown RBP13.97□□□□□ -0.17
RHO-201ENST00000296271 HELLSQ9NRZ9 838 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms