RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 STXBP4Q6ZWJ1 553 aa20.45■□□□□ 0.86
CDC42EP3-201ENST00000295324 TTC6Q86TZ1 520 aa20.45■□□□□ 0.86
CDC42EP3-201ENST00000295324 CTAGE5O15320 804 aa20.44■□□□□ 0.86
CDC42EP3-201ENST00000295324 ITGA6P23229 1130 aa20.44■□□□□ 0.86
CDC42EP3-201ENST00000295324 CNNM3Q8NE01 707 aa20.44■□□□□ 0.86
CDC42EP3-201ENST00000295324 CFAP100Q494V2 611 aa20.44■□□□□ 0.86
CDC42EP3-201ENST00000295324 FLAD1Q8NFF5 587 aa20.44■□□□□ 0.86
CDC42EP3-201ENST00000295324 LARP6Q9BRS8 491 aaKnown RBP20.44■□□□□ 0.86
CDC42EP3-201ENST00000295324 MAGEB6Q8N7X4 407 aa20.44■□□□□ 0.86
CDC42EP3-201ENST00000295324 RBM27Q9P2N5 1060 aaKnown RBP20.44■□□□□ 0.86
CDC42EP3-201ENST00000295324 GGA1Q9UJY5 639 aa20.44■□□□□ 0.86
CDC42EP3-201ENST00000295324 ESYT1Q9BSJ8 1104 aa20.44■□□□□ 0.86
CDC42EP3-201ENST00000295324 SKAP1Q86WV1 359 aa20.44■□□□□ 0.86
CDC42EP3-201ENST00000295324 TRPC5Q9UL62 973 aaPredicted RBP20.44■□□□□ 0.86
CDC42EP3-201ENST00000295324 RAB11FIP4Q86YS3 637 aa20.43■□□□□ 0.86
CDC42EP3-201ENST00000295324 TMEM87AQ8NBN3 555 aa20.43■□□□□ 0.86
CDC42EP3-201ENST00000295324 KLHL10Q6JEL2 608 aa20.43■□□□□ 0.86
CDC42EP3-201ENST00000295324 MBD5Q9P267 1494 aa20.43■□□□□ 0.86
CDC42EP3-201ENST00000295324 PTPRTO14522 1441 aa20.43■□□□□ 0.86
CDC42EP3-201ENST00000295324 CALM1P0DP23 149 aa20.43■□□□□ 0.86
CDC42EP3-201ENST00000295324 CALM2P0DP24 149 aa20.43■□□□□ 0.86
CDC42EP3-201ENST00000295324 CALM3P0DP25 149 aa20.43■□□□□ 0.86
CDC42EP3-201ENST00000295324 LRRC27Q9C0I9 530 aa20.43■□□□□ 0.86
CDC42EP3-201ENST00000295324 HIBADHP31937 336 aaKnown RBP20.43■□□□□ 0.86
CDC42EP3-201ENST00000295324 STX6O43752 255 aa20.42■□□□□ 0.86
CDC42EP3-201ENST00000295324 ERLIN2O94905 339 aa20.42■□□□□ 0.86
CDC42EP3-201ENST00000295324 ANAPC15P60006 121 aa20.42■□□□□ 0.86
CDC42EP3-201ENST00000295324 CAMK4Q16566 473 aa20.42■□□□□ 0.86
CDC42EP3-201ENST00000295324 ERMNQ8TAM6 284 aa20.42■□□□□ 0.86
CDC42EP3-201ENST00000295324 BMP15O95972 392 aa20.42■□□□□ 0.86
CDC42EP3-201ENST00000295324 CCDC181Q5TID7 509 aa20.42■□□□□ 0.86
CDC42EP3-201ENST00000295324 ZNF496Q96IT1 587 aaPredicted RBP20.42■□□□□ 0.86
CDC42EP3-201ENST00000295324 RBM25P49756 843 aaKnown RBP20.42■□□□□ 0.86
CDC42EP3-201ENST00000295324 SUPT20HQ8NEM7 779 aa20.42■□□□□ 0.86
CDC42EP3-201ENST00000295324 IDEP14735 1019 aa20.42■□□□□ 0.86
CDC42EP3-201ENST00000295324 PUM3Q15397 648 aaKnown RBP20.42■□□□□ 0.86
CDC42EP3-201ENST00000295324 CCDC150Q8NCX0 1101 aa20.42■□□□□ 0.86
CDC42EP3-201ENST00000295324 MIGA1Q8NAN2 632 aa20.41■□□□□ 0.86
CDC42EP3-201ENST00000295324 NMIQ13287 307 aaPredicted RBP20.41■□□□□ 0.86
CDC42EP3-201ENST00000295324 KDM5DQ9BY66 1539 aa20.41■□□□□ 0.86
CDC42EP3-201ENST00000295324 GJA3Q9Y6H8 435 aa20.41■□□□□ 0.86
CDC42EP3-201ENST00000295324 TRMT1LQ7Z2T5 733 aaKnown RBP20.41■□□□□ 0.86
CDC42EP3-201ENST00000295324 UGGT1Q9NYU2 1555 aa20.41■□□□□ 0.86
CDC42EP3-201ENST00000295324 FBXO3Q9UK99 471 aa20.41■□□□□ 0.86
CDC42EP3-201ENST00000295324 FSIP1Q8NA03 581 aa20.4■□□□□ 0.86
CDC42EP3-201ENST00000295324 MAST3O60307 1309 aa20.4■□□□□ 0.86
CDC42EP3-201ENST00000295324 CETN1Q12798 172 aa20.4■□□□□ 0.86
CDC42EP3-201ENST00000295324 FILIP1Q7Z7B0 1213 aa20.4■□□□□ 0.86
CDC42EP3-201ENST00000295324 CFAP65Q6ZU64 1925 aaKnown RBP20.4■□□□□ 0.86
CDC42EP3-201ENST00000295324 EPB41L2O43491 1005 aaKnown RBP20.4■□□□□ 0.86
CDC42EP3-201ENST00000295324 DPP8Q6V1X1 898 aaPredicted RBP20.4■□□□□ 0.86
CDC42EP3-201ENST00000295324 G2E3Q7L622 706 aa20.4■□□□□ 0.86
CDC42EP3-201ENST00000295324 ZSCAN16Q9H4T2 348 aaPredicted RBP20.4■□□□□ 0.86
CDC42EP3-201ENST00000295324 NEBLO76041 1014 aa20.4■□□□□ 0.86
CDC42EP3-201ENST00000295324 CCDC183Q5T5S1 534 aa20.39■□□□□ 0.86
CDC42EP3-201ENST00000295324 EIF6P56537 245 aaKnown RBP20.39■□□□□ 0.85
CDC42EP3-201ENST00000295324 ZBTB40Q9NUA8 1239 aa20.39■□□□□ 0.85
CDC42EP3-201ENST00000295324 NLRP1Q9C000 1473 aa20.39■□□□□ 0.85
CDC42EP3-201ENST00000295324 LIG1P18858 919 aa20.39■□□□□ 0.85
CDC42EP3-201ENST00000295324 VPS36Q86VN1 386 aa20.39■□□□□ 0.85
CDC42EP3-201ENST00000295324 DDX19AQ9NUU7 478 aaKnown RBP20.39■□□□□ 0.85
CDC42EP3-201ENST00000295324 PLXNC1O60486 1568 aa20.39■□□□□ 0.85
CDC42EP3-201ENST00000295324 PDE6BP35913 854 aa20.39■□□□□ 0.85
CDC42EP3-201ENST00000295324 CETN2P41208 172 aa20.39■□□□□ 0.85
CDC42EP3-201ENST00000295324 KANK3Q6NY19 840 aa20.39■□□□□ 0.85
CDC42EP3-201ENST00000295324 SH2D4AQ9H788 454 aa20.39■□□□□ 0.85
CDC42EP3-201ENST00000295324 RTL9Q8NET4 1388 aa20.38■□□□□ 0.85
CDC42EP3-201ENST00000295324 LARGE2Q8N3Y3 721 aa20.38■□□□□ 0.85
CDC42EP3-201ENST00000295324 SMARCC2Q8TAQ2 1214 aa20.38■□□□□ 0.85
CDC42EP3-201ENST00000295324 HEATR3Q7Z4Q2 680 aa20.38■□□□□ 0.85
CDC42EP3-201ENST00000295324 ALG1Q9BT22 464 aa20.38■□□□□ 0.85
CDC42EP3-201ENST00000295324 PRC1O43663 620 aa20.38■□□□□ 0.85
CDC42EP3-201ENST00000295324 A0A1B0GUL7 405 aa20.38■□□□□ 0.85
CDC42EP3-201ENST00000295324 CACNA2D4Q7Z3S7 1137 aa20.38■□□□□ 0.85
CDC42EP3-201ENST00000295324 TEX11Q8IYF3 940 aa20.38■□□□□ 0.85
CDC42EP3-201ENST00000295324 QTRT2Q9H974 415 aaKnown RBP20.38■□□□□ 0.85
CDC42EP3-201ENST00000295324 RAD50Q92878 1312 aa20.37■□□□□ 0.85
CDC42EP3-201ENST00000295324 PHKG2P15735 406 aa20.37■□□□□ 0.85
CDC42EP3-201ENST00000295324 ALDH1B1P30837 517 aa20.37■□□□□ 0.85
CDC42EP3-201ENST00000295324 TFIP11Q9UBB9 837 aaKnown RBP20.37■□□□□ 0.85
CDC42EP3-201ENST00000295324 NAPAP54920 295 aa20.37■□□□□ 0.85
CDC42EP3-201ENST00000295324 TBC1D2Q9BYX2 928 aa20.37■□□□□ 0.85
CDC42EP3-201ENST00000295324 CERS3Q8IU89 383 aa20.37■□□□□ 0.85
CDC42EP3-201ENST00000295324 WDR66Q8TBY9 1149 aa20.37■□□□□ 0.85
CDC42EP3-201ENST00000295324 JAG2Q9Y219 1238 aa20.37■□□□□ 0.85
CDC42EP3-201ENST00000295324 METP08581 1390 aa20.37■□□□□ 0.85
CDC42EP3-201ENST00000295324 ZNF772Q68DY9 489 aaPredicted RBP20.37■□□□□ 0.85
CDC42EP3-201ENST00000295324 LRRC2Q9BYS8 371 aa20.37■□□□□ 0.85
CDC42EP3-201ENST00000295324 MAGI3Q5TCQ9 1506 aa20.36■□□□□ 0.85
CDC42EP3-201ENST00000295324 C6orf50Q9HD87 102 aa20.36■□□□□ 0.85
CDC42EP3-201ENST00000295324 EIF4A1P60842 406 aaKnown RBP20.36■□□□□ 0.85
CDC42EP3-201ENST00000295324 KIAA1328Q86T90 577 aa20.36■□□□□ 0.85
CDC42EP3-201ENST00000295324 SYCE3A1L190 88 aa20.36■□□□□ 0.85
CDC42EP3-201ENST00000295324 SSR1P43307 286 aaKnown RBP20.36■□□□□ 0.85
CDC42EP3-201ENST00000295324 GRPEL1Q9HAV7 217 aa20.36■□□□□ 0.85
CDC42EP3-201ENST00000295324 INSRP06213 1382 aa20.36■□□□□ 0.85
CDC42EP3-201ENST00000295324 SBNO2Q9Y2G9 1366 aa20.36■□□□□ 0.85
CDC42EP3-201ENST00000295324 CKAP2LQ8IYA6 745 aa20.36■□□□□ 0.85
CDC42EP3-201ENST00000295324 TBCAO75347 108 aaKnown RBP20.35■□□□□ 0.85
CDC42EP3-201ENST00000295324 CALML3P27482 149 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms