RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 RBM8AQ9Y5S9 174 aaKnown RBP20.17■□□□□ 0.82
HIF3A-203ENST00000291300 IFIT1P09914 478 aaKnown RBP20.17■□□□□ 0.82
HIF3A-203ENST00000291300 C3orf67Q6ZVT6 689 aa20.17■□□□□ 0.82
HIF3A-203ENST00000291300 SNAP23O00161 211 aa20.16■□□□□ 0.82
HIF3A-203ENST00000291300 PARP10Q53GL7 1025 aa20.16■□□□□ 0.82
HIF3A-203ENST00000291300 PI16Q6UXB8 463 aa20.16■□□□□ 0.82
HIF3A-203ENST00000291300 BICDL1Q6ZP65 573 aa20.16■□□□□ 0.82
HIF3A-203ENST00000291300 KBTBD3Q8NAB2 608 aa20.16■□□□□ 0.82
HIF3A-203ENST00000291300 MAP4K1Q92918 833 aa20.16■□□□□ 0.82
HIF3A-203ENST00000291300 TMX3Q96JJ7 454 aa20.16■□□□□ 0.82
HIF3A-203ENST00000291300 LARP6Q9BRS8 491 aaKnown RBP20.16■□□□□ 0.82
HIF3A-203ENST00000291300 QTRT2Q9H974 415 aaKnown RBP20.16■□□□□ 0.82
HIF3A-203ENST00000291300 LRP5O75197 1615 aa20.15■□□□□ 0.82
HIF3A-203ENST00000291300 LY75O60449 1722 aa20.15■□□□□ 0.82
HIF3A-203ENST00000291300 SPEF2Q9C093 1822 aa20.15■□□□□ 0.82
HIF3A-203ENST00000291300 GNPATO15228 680 aa20.15■□□□□ 0.82
HIF3A-203ENST00000291300 TAF5LO75529 589 aa20.15■□□□□ 0.82
HIF3A-203ENST00000291300 ATP2B3Q16720 1220 aa20.15■□□□□ 0.82
HIF3A-203ENST00000291300 TBC1D9BQ66K14 1250 aa20.15■□□□□ 0.82
HIF3A-203ENST00000291300 AKAP2Q9Y2D5 859 aa20.15■□□□□ 0.82
HIF3A-203ENST00000291300 TAF1LQ8IZX4 1826 aa20.15■□□□□ 0.82
HIF3A-203ENST00000291300 ERFEQ4G0M1 354 aa20.14■□□□□ 0.81
HIF3A-203ENST00000291300 USPL1Q5W0Q7 1092 aa20.14■□□□□ 0.81
HIF3A-203ENST00000291300 KCNB2Q92953 911 aa20.14■□□□□ 0.81
HIF3A-203ENST00000291300 TAF1P21675 1872 aa20.14■□□□□ 0.81
HIF3A-203ENST00000291300 SCN7AQ01118 1682 aa20.14■□□□□ 0.81
HIF3A-203ENST00000291300 PKP1Q13835 747 aa20.14■□□□□ 0.81
HIF3A-203ENST00000291300 CREB3L3Q68CJ9 461 aa20.14■□□□□ 0.81
HIF3A-203ENST00000291300 TNPO1Q92973 898 aaKnown RBP20.14■□□□□ 0.81
HIF3A-203ENST00000291300 LAMB2P55268 1798 aa20.13■□□□□ 0.81
HIF3A-203ENST00000291300 RPS6KA4O75676 772 aa20.13■□□□□ 0.81
HIF3A-203ENST00000291300 FKBP4Q02790 459 aaKnown RBP eCLIP20.13■□□□□ 0.81
HIF3A-203ENST00000291300 TTC39AQ5SRH9 613 aa20.13■□□□□ 0.81
HIF3A-203ENST00000291300 GORABQ5T7V8 394 aa20.13■□□□□ 0.81
HIF3A-203ENST00000291300 TTC14Q96N46 770 aa20.13■□□□□ 0.81
HIF3A-203ENST00000291300 SSFA2P28290 1259 aa20.12■□□□□ 0.81
HIF3A-203ENST00000291300 RAB3GAP1Q15042 981 aa20.12■□□□□ 0.81
HIF3A-203ENST00000291300 RC3H1Q5TC82 1133 aaKnown RBP20.12■□□□□ 0.81
HIF3A-203ENST00000291300 CLEC4GQ6UXB4 293 aa20.12■□□□□ 0.81
HIF3A-203ENST00000291300 AK7Q96M32 723 aa20.12■□□□□ 0.81
HIF3A-203ENST00000291300 ZNF652Q9Y2D9 606 aa20.12■□□□□ 0.81
HIF3A-203ENST00000291300 CASZ1Q86V15 1759 aa20.12■□□□□ 0.81
HIF3A-203ENST00000291300 SLC27A2O14975 620 aa20.12■□□□□ 0.81
HIF3A-203ENST00000291300 PDE8BO95263 885 aa20.12■□□□□ 0.81
HIF3A-203ENST00000291300 CASTP20810 708 aaKnown RBP20.12■□□□□ 0.81
HIF3A-203ENST00000291300 LRRC4BQ9NT99 713 aa20.12■□□□□ 0.81
HIF3A-203ENST00000291300 CIZ1Q9ULV3 898 aaPredicted RBP20.12■□□□□ 0.81
HIF3A-203ENST00000291300 RFX7Q2KHR2 1363 aa20.11■□□□□ 0.81
HIF3A-203ENST00000291300 AKAP11Q9UKA4 1901 aa20.11■□□□□ 0.81
HIF3A-203ENST00000291300 BRWD3Q6RI45 1802 aa20.11■□□□□ 0.81
HIF3A-203ENST00000291300 CCDC158Q5M9N0 1113 aa20.11■□□□□ 0.81
HIF3A-203ENST00000291300 JAKMIP1Q96N16 626 aaKnown RBP20.11■□□□□ 0.81
HIF3A-203ENST00000291300 ZAP70P43403 619 aa20.11■□□□□ 0.81
HIF3A-203ENST00000291300 CCDC24Q8N4L8 307 aa20.11■□□□□ 0.81
HIF3A-203ENST00000291300 NARFQ9UHQ1 456 aa20.11■□□□□ 0.81
HIF3A-203ENST00000291300 MCM4P33991 863 aa20.1■□□□□ 0.81
HIF3A-203ENST00000291300 MCAMP43121 646 aa20.1■□□□□ 0.81
HIF3A-203ENST00000291300 KCNJ4P48050 445 aa20.1■□□□□ 0.81
HIF3A-203ENST00000291300 AK2P54819 239 aa20.1■□□□□ 0.81
HIF3A-203ENST00000291300 VPS53Q5VIR6 699 aa20.1■□□□□ 0.81
HIF3A-203ENST00000291300 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.1■□□□□ 0.81
HIF3A-203ENST00000291300 ABCC12Q96J65 1359 aa20.1■□□□□ 0.81
HIF3A-203ENST00000291300 MCMDC2Q4G0Z9 681 aa20.09■□□□□ 0.81
HIF3A-203ENST00000291300 ARHGEF1Q92888 912 aaKnown RBP20.09■□□□□ 0.81
HIF3A-203ENST00000291300 PHF14O94880 888 aa20.09■□□□□ 0.81
HIF3A-203ENST00000291300 FGFR2P21802 821 aa20.09■□□□□ 0.81
HIF3A-203ENST00000291300 PHKA1P46020 1223 aa20.09■□□□□ 0.81
HIF3A-203ENST00000291300 CCDC152Q4G0S7 254 aa20.09■□□□□ 0.81
HIF3A-203ENST00000291300 RUFY3Q7L099 469 aa20.09■□□□□ 0.81
HIF3A-203ENST00000291300 MYO5AQ9Y4I1 1855 aaKnown RBP20.09■□□□□ 0.81
HIF3A-203ENST00000291300 C4BP0C0L5 1744 aa20.09■□□□□ 0.81
HIF3A-203ENST00000291300 CUL4AQ13619 759 aa20.08■□□□□ 0.81
HIF3A-203ENST00000291300 ZMYM1Q5SVZ6 1142 aa20.08■□□□□ 0.81
HIF3A-203ENST00000291300 A0A0G2JLW4 131 aa20.08■□□□□ 0.8
HIF3A-203ENST00000291300 WTIPA6NIX2 430 aaPredicted RBP20.08■□□□□ 0.8
HIF3A-203ENST00000291300 DTNBO60941 627 aa20.08■□□□□ 0.8
HIF3A-203ENST00000291300 ZSWIM6Q9HCJ5 1215 aa20.08■□□□□ 0.8
HIF3A-203ENST00000291300 C4AP0C0L4 1744 aa20.07■□□□□ 0.8
HIF3A-203ENST00000291300 M0R2C6 588 aa20.07■□□□□ 0.8
HIF3A-203ENST00000291300 LARGE1O95461 756 aa20.07■□□□□ 0.8
HIF3A-203ENST00000291300 MCM2P49736 904 aa20.07■□□□□ 0.8
HIF3A-203ENST00000291300 MPHOSPH8Q99549 860 aa20.07■□□□□ 0.8
HIF3A-203ENST00000291300 BCL11BQ9C0K0 894 aaPredicted RBP20.07■□□□□ 0.8
HIF3A-203ENST00000291300 RTCBQ9Y3I0 505 aaKnown RBP20.07■□□□□ 0.8
HIF3A-203ENST00000291300 MAST3O60307 1309 aa20.07■□□□□ 0.8
HIF3A-203ENST00000291300 RPAP1Q9BWH6 1393 aaPredicted RBP20.07■□□□□ 0.8
HIF3A-203ENST00000291300 RNF113AO15541 343 aaKnown RBP20.06■□□□□ 0.8
HIF3A-203ENST00000291300 DEKP35659 375 aaKnown RBP20.06■□□□□ 0.8
HIF3A-203ENST00000291300 CCDC102BQ68D86 513 aa20.06■□□□□ 0.8
HIF3A-203ENST00000291300 FAM196AQ6ZSG2 479 aa20.06■□□□□ 0.8
HIF3A-203ENST00000291300 OSBP2Q969R2 916 aa20.06■□□□□ 0.8
HIF3A-203ENST00000291300 TCEANC2Q96MN5 208 aa20.06■□□□□ 0.8
HIF3A-203ENST00000291300 ZDHHC9Q9Y397 364 aa20.06■□□□□ 0.8
HIF3A-203ENST00000291300 MROH5Q6ZUA9 1318 aa20.06■□□□□ 0.8
HIF3A-203ENST00000291300 RTL9Q8NET4 1388 aa20.06■□□□□ 0.8
HIF3A-203ENST00000291300 CYP2E1P05181 493 aaPredicted RBP20.05■□□□□ 0.8
HIF3A-203ENST00000291300 PUM3Q15397 648 aaKnown RBP20.05■□□□□ 0.8
HIF3A-203ENST00000291300 ARAP2Q8WZ64 1704 aa20.05■□□□□ 0.8
HIF3A-203ENST00000291300 ZPR1O75312 459 aa20.05■□□□□ 0.8
HIF3A-203ENST00000291300 ZKSCAN1P17029 563 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms