RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SEC62Q99442 399 aaKnown RBP14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 CCDC94Q9BW85 323 aaPredicted RBP14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 KIF2AO00139 706 aaPredicted RBP14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 HMGB1P09429 215 aaKnown RBP14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 MNAT1P51948 309 aa14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 GTF2A1P52655 376 aaPredicted RBP14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 BEND3Q5T5X7 828 aa14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 KLHL10Q6JEL2 608 aa14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 MARCKSP29966 332 aaPredicted RBP14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 OTUD7BQ6GQQ9 843 aa14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 ZSWIM4Q9H7M6 989 aa14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 AKAP2Q9Y2D5 859 aa14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 ERBB4Q15303 1308 aa14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 A0A0D9SFI3 127 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 NUTM2BA6NNL0 878 aaPredicted RBP14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 NUTM2EB1AL46 878 aaPredicted RBP14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 STARD3NLO95772 234 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 BMS1Q14692 1282 aaKnown RBP14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 TAX1BP1Q86VP1 789 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 NUTM2AQ8IVF1 878 aaPredicted RBP14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 HELBQ8NG08 1087 aaPredicted RBP14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 PAG1Q9NWQ8 432 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 ARHGEF10O15013 1369 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 NAPBQ9H115 298 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 QRICH2Q9H0J4 1663 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 G3V3G9 751 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 DCAF8Q5TAQ9 597 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 NACAP1Q9BZK3 213 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 TLR7Q9NYK1 1049 aaKnown RBP14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 KIF24Q5T7B8 1368 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 PTCH1Q13635 1447 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 CLASP1Q7Z460 1538 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 UBAC1Q9BSL1 405 aa14.53□□□□□ -0.08
SLC6A1-201ENST00000287766 GIGYF1O75420 1035 aaPredicted RBP14.52□□□□□ -0.08
SLC6A1-201ENST00000287766 XBP1P17861 261 aa14.52□□□□□ -0.08
SLC6A1-201ENST00000287766 IRX3P78415 501 aaPredicted RBP14.52□□□□□ -0.08
SLC6A1-201ENST00000287766 CCDC181Q5TID7 509 aa14.52□□□□□ -0.08
SLC6A1-201ENST00000287766 JAKMIP3Q5VZ66 844 aa14.52□□□□□ -0.08
SLC6A1-201ENST00000287766 TICAM2Q86XR7 235 aa14.52□□□□□ -0.08
SLC6A1-201ENST00000287766 GTPBP4Q9BZE4 634 aaKnown RBP14.52□□□□□ -0.08
SLC6A1-201ENST00000287766 CEP152O94986 1710 aa14.52□□□□□ -0.08
SLC6A1-201ENST00000287766 TMC6Q7Z403 805 aa14.52□□□□□ -0.09
SLC6A1-201ENST00000287766 HECW2Q9P2P5 1572 aa14.52□□□□□ -0.09
SLC6A1-201ENST00000287766 SLC3A2P08195 630 aaKnown RBP14.52□□□□□ -0.09
SLC6A1-201ENST00000287766 PDIA4P13667 645 aaKnown RBP14.52□□□□□ -0.09
SLC6A1-201ENST00000287766 SLC4A8Q2Y0W8 1093 aa14.52□□□□□ -0.09
SLC6A1-201ENST00000287766 ZSCAN25Q6NSZ9 544 aa14.52□□□□□ -0.09
SLC6A1-201ENST00000287766 ATP7BP35670 1465 aa14.52□□□□□ -0.09
SLC6A1-201ENST00000287766 PTPDC1A2A3K4 754 aa14.51□□□□□ -0.09
SLC6A1-201ENST00000287766 IFIT3O14879 490 aaKnown RBP14.51□□□□□ -0.09
SLC6A1-201ENST00000287766 A1BGP04217 495 aa14.51□□□□□ -0.09
SLC6A1-201ENST00000287766 LRRC7Q96NW7 1537 aa14.51□□□□□ -0.09
SLC6A1-201ENST00000287766 KIF4BQ2VIQ3 1234 aa14.51□□□□□ -0.09
SLC6A1-201ENST00000287766 RPS6KB1P23443 525 aa14.51□□□□□ -0.09
SLC6A1-201ENST00000287766 TPCN1Q9ULQ1 816 aa14.51□□□□□ -0.09
SLC6A1-201ENST00000287766 IGSF1Q8N6C5 1336 aa14.51□□□□□ -0.09
SLC6A1-201ENST00000287766 CT47A1Q5JQC4 288 aaPredicted RBP14.51□□□□□ -0.09
SLC6A1-201ENST00000287766 SETD1BQ9UPS6 1966 aaKnown RBP14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 NPHP3Q7Z494 1330 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 GOLGA6L7A0A1B0GV03 622 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 STX1AQ16623 288 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 TNNI3KQ59H18 835 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 AOPEPQ8N6M6 819 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 DYDC1Q8WWB3 177 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 OSBPL3Q9H4L5 887 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 ZNHIT6Q9NWK9 470 aaKnown RBP14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 FPGT-TNNI3KV9GXZ4 949 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 PNPLA6Q8IY17 1366 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 SHTN1A0MZ66 631 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 CDKL5O76039 1030 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 LARGE1O95461 756 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 GCKRQ14397 625 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 DHX8Q14562 1220 aaKnown RBP14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 FAM89AQ96GI7 184 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 BRMS1Q9HCU9 246 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 LAMC1P11047 1609 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 ADGRB3O60242 1522 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 GOLGA8AA7E2F4 631 aa14.5□□□□□ -0.09
SLC6A1-201ENST00000287766 HS1BP3Q53T59 392 aa14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 SMAP1Q8IYB5 467 aaPredicted RBP14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 ZCRB1Q8TBF4 217 aaKnown RBP14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 PPP1R9BQ96SB3 815 aa14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 LIG1P18858 919 aa14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 ZSCAN16Q9H4T2 348 aaPredicted RBP14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 USP6P35125 1406 aa14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 PPRC1Q5VV67 1664 aaKnown RBP14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 CEP135Q66GS9 1140 aa14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 SAMD1Q6SPF0 538 aaPredicted RBP14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 CPLX3Q8WVH0 158 aa14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 LSG1Q9H089 658 aaKnown RBP14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 A0A1B0GVL5 298 aa14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 ANKRD18BA2A2Z9 1011 aa14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 EPB41L2O43491 1005 aaKnown RBP14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 RNF187Q5TA31 235 aaPredicted RBP14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 SLC9C2Q5TAH2 1124 aa14.49□□□□□ -0.09
SLC6A1-201ENST00000287766 CBFA2T2O43439 604 aa14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 ZFYVE27Q5T4F4 411 aa14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 METTL22Q9BUU2 404 aaPredicted RBP14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 SLC26A6Q9BXS9 759 aa14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 STAP2Q9UGK3 403 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms