RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 LINS1Q8NG48 757 aa16.27■□□□□ 0.19
LPCAT1-201ENST00000283415 FUCA2Q9BTY2 467 aa16.27■□□□□ 0.19
LPCAT1-201ENST00000283415 TLR7Q9NYK1 1049 aaKnown RBP16.27■□□□□ 0.19
LPCAT1-201ENST00000283415 NWD2Q9ULI1 1742 aa16.27■□□□□ 0.19
LPCAT1-201ENST00000283415 CCDC57Q2TAC2 916 aa16.27■□□□□ 0.19
LPCAT1-201ENST00000283415 SPATA32Q96LK8 384 aa16.27■□□□□ 0.19
LPCAT1-201ENST00000283415 TFCP2Q12800 502 aa16.26■□□□□ 0.19
LPCAT1-201ENST00000283415 RALYLQ86SE5 291 aaKnown RBP16.26■□□□□ 0.19
LPCAT1-201ENST00000283415 CCDC144CPQ8IYA2 1237 aa16.26■□□□□ 0.19
LPCAT1-201ENST00000283415 VPS53Q5VIR6 699 aa16.26■□□□□ 0.19
LPCAT1-201ENST00000283415 MAP4K1Q92918 833 aa16.26■□□□□ 0.19
LPCAT1-201ENST00000283415 BRF1Q92994 677 aa16.26■□□□□ 0.19
LPCAT1-201ENST00000283415 SEC62Q99442 399 aaKnown RBP16.26■□□□□ 0.19
LPCAT1-201ENST00000283415 A1BGP04217 495 aa16.26■□□□□ 0.19
LPCAT1-201ENST00000283415 SLFNL1Q499Z3 407 aa16.26■□□□□ 0.19
LPCAT1-201ENST00000283415 CEP126Q9P2H0 1117 aa16.26■□□□□ 0.19
LPCAT1-201ENST00000283415 LARGE1O95461 756 aa16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 SYT1P21579 422 aa16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 CASP7P55210 303 aa16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 KRT85P78386 507 aa16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 ME1P48163 572 aa16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 ADCK5Q3MIX3 580 aa16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 RABL6Q3YEC7 729 aaPredicted RBP16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 TTC39AQ5SRH9 613 aa16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 ISM2Q6H9L7 571 aa16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 TNMDQ9H2S6 317 aa16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 ZKSCAN5Q9Y2L8 839 aa16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 CPDO75976 1380 aa16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 USPL1Q5W0Q7 1092 aa16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 PIBF1Q8WXW3 757 aa16.25■□□□□ 0.19
LPCAT1-201ENST00000283415 COL9A3Q14050 684 aaPredicted RBP16.24■□□□□ 0.19
LPCAT1-201ENST00000283415 BICDL1Q6ZP65 573 aa16.24■□□□□ 0.19
LPCAT1-201ENST00000283415 IQSEC3Q9UPP2 1182 aaPredicted RBP16.24■□□□□ 0.19
LPCAT1-201ENST00000283415 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
LPCAT1-201ENST00000283415 HELBQ8NG08 1087 aaPredicted RBP16.24■□□□□ 0.19
LPCAT1-201ENST00000283415 EAF2Q96CJ1 260 aaPredicted RBP16.24■□□□□ 0.19
LPCAT1-201ENST00000283415 TERF1P54274 439 aa16.24■□□□□ 0.19
LPCAT1-201ENST00000283415 ZBTB9Q96C00 473 aa16.24■□□□□ 0.19
LPCAT1-201ENST00000283415 DBNDD2Q9BQY9 259 aa16.24■□□□□ 0.19
LPCAT1-201ENST00000283415 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.24■□□□□ 0.19
LPCAT1-201ENST00000283415 IFIT1P09914 478 aaKnown RBP16.23■□□□□ 0.19
LPCAT1-201ENST00000283415 TPD52L1Q16890 204 aaPredicted RBP16.23■□□□□ 0.19
LPCAT1-201ENST00000283415 ZNF790Q6PG37 636 aa16.23■□□□□ 0.19
LPCAT1-201ENST00000283415 EVI5LQ96CN4 794 aa16.23■□□□□ 0.19
LPCAT1-201ENST00000283415 C16orf45Q96MC5 204 aaPredicted RBP16.23■□□□□ 0.19
LPCAT1-201ENST00000283415 OFD1O75665 1012 aa16.23■□□□□ 0.19
LPCAT1-201ENST00000283415 ADAMTS2O95450 1211 aa16.23■□□□□ 0.19
LPCAT1-201ENST00000283415 SLC52A2Q9HAB3 445 aa16.23■□□□□ 0.19
LPCAT1-201ENST00000283415 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
LPCAT1-201ENST00000283415 CHGBP05060 677 aa16.23■□□□□ 0.19
LPCAT1-201ENST00000283415 TRDNQ13061 729 aa16.23■□□□□ 0.19
LPCAT1-201ENST00000283415 PDCL3Q9H2J4 239 aa16.23■□□□□ 0.19
LPCAT1-201ENST00000283415 CCAR2Q8N163 923 aaKnown RBP16.22■□□□□ 0.19
LPCAT1-201ENST00000283415 TNS2Q63HR2 1409 aa16.22■□□□□ 0.19
LPCAT1-201ENST00000283415 CCDC192P0DO97 292 aa16.22■□□□□ 0.19
LPCAT1-201ENST00000283415 ZSCAN22P10073 491 aaPredicted RBP16.22■□□□□ 0.19
LPCAT1-201ENST00000283415 ZNF771Q7L3S4 317 aaPredicted RBP16.22■□□□□ 0.19
LPCAT1-201ENST00000283415 NEURL1BA8MQ27 555 aa16.22■□□□□ 0.19
LPCAT1-201ENST00000283415 SLC4A8Q2Y0W8 1093 aa16.22■□□□□ 0.19
LPCAT1-201ENST00000283415 CCDC171Q6TFL3 1326 aa16.22■□□□□ 0.19
LPCAT1-201ENST00000283415 A0A0U1RQG5 324 aaPredicted RBP16.21■□□□□ 0.19
LPCAT1-201ENST00000283415 POLR3DP05423 398 aaPredicted RBP16.21■□□□□ 0.19
LPCAT1-201ENST00000283415 PHKG2P15735 406 aa16.21■□□□□ 0.19
LPCAT1-201ENST00000283415 CCDC183Q5T5S1 534 aa16.21■□□□□ 0.19
LPCAT1-201ENST00000283415 CCDC73Q6ZRK6 1079 aa16.21■□□□□ 0.19
LPCAT1-201ENST00000283415 NUP62CLQ9H1M0 184 aa16.21■□□□□ 0.19
LPCAT1-201ENST00000283415 CREB3L3Q68CJ9 461 aa16.21■□□□□ 0.19
LPCAT1-201ENST00000283415 NHSL1Q5SYE7 1610 aa16.21■□□□□ 0.19
LPCAT1-201ENST00000283415 SNRPA1P09661 255 aaKnown RBP16.21■□□□□ 0.19
LPCAT1-201ENST00000283415 ERCC4Q92889 916 aaPredicted RBP16.21■□□□□ 0.19
LPCAT1-201ENST00000283415 MTMR6Q9Y217 621 aa16.2■□□□□ 0.18
LPCAT1-201ENST00000283415 RXRAP19793 462 aa16.2■□□□□ 0.18
LPCAT1-201ENST00000283415 EPHA10Q5JZY3 1008 aa16.2■□□□□ 0.18
LPCAT1-201ENST00000283415 CCDC158Q5M9N0 1113 aa16.2■□□□□ 0.18
LPCAT1-201ENST00000283415 FAM89AQ96GI7 184 aa16.2■□□□□ 0.18
LPCAT1-201ENST00000283415 COPRSQ9NQ92 184 aa16.2■□□□□ 0.18
LPCAT1-201ENST00000283415 TNS3Q68CZ2 1445 aa16.2■□□□□ 0.18
LPCAT1-201ENST00000283415 BIN1O00499 593 aa16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 MCM5P33992 734 aa16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 METTL24Q5JXM2 366 aa16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 TRMT1Q9NXH9 659 aaKnown RBP16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 ANKRD36CQ5JPF3 1778 aa16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 NCOA5Q9HCD5 579 aaKnown RBP16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 A0A0D9SFI3 127 aa16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 PDCP20941 246 aa16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 GCKRQ14397 625 aa16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 METTL22Q9BUU2 404 aaPredicted RBP16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 MYH7P12883 1935 aa16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 HIP1O00291 1037 aa16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 F13A1P00488 732 aa16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 SYNE3Q6ZMZ3 975 aa16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 TICAM2Q86XR7 235 aa16.19■□□□□ 0.18
LPCAT1-201ENST00000283415 ARAP2Q8WZ64 1704 aa16.18■□□□□ 0.18
LPCAT1-201ENST00000283415 NRDCO43847 1150 aa16.18■□□□□ 0.18
LPCAT1-201ENST00000283415 OTUD7BQ6GQQ9 843 aa16.18■□□□□ 0.18
LPCAT1-201ENST00000283415 FAM177A1Q8N128 213 aaPredicted RBP16.18■□□□□ 0.18
LPCAT1-201ENST00000283415 WNK3Q9BYP7 1800 aa16.18■□□□□ 0.18
LPCAT1-201ENST00000283415 JAK2O60674 1132 aa16.18■□□□□ 0.18
LPCAT1-201ENST00000283415 KIF6Q6ZMV9 814 aa16.18■□□□□ 0.18
LPCAT1-201ENST00000283415 VPS37DQ86XT2 251 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms