RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 CMTR1Q8N1G2 835 aaKnown RBP4.39□□□□□ -1.71
RAB3C-201ENST00000282878 GIPC2Q8TF65 315 aa4.39□□□□□ -1.71
RAB3C-201ENST00000282878 DHX16O60231 1041 aaKnown RBP4.38□□□□□ -1.71
RAB3C-201ENST00000282878 ATP2B1P20020 1258 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 CEP120Q8N960 986 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 COMMD10Q9Y6G5 202 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 ADGRL3Q9HAR2 1447 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 ATP10DQ9P241 1426 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 USP31Q70CQ4 1352 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 GTF2F1P35269 517 aaKnown RBP eCLIP4.38□□□□□ -1.71
RAB3C-201ENST00000282878 PIGBQ92521 554 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 SLC4A9Q96Q91 983 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 RBM8AQ9Y5S9 174 aaKnown RBP4.38□□□□□ -1.71
RAB3C-201ENST00000282878 RICTORQ6R327 1708 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 SLURP2P0DP57 97 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 PTPN12Q05209 780 aaKnown RBP4.38□□□□□ -1.71
RAB3C-201ENST00000282878 FAM98CQ17RN3 349 aaKnown RBP4.38□□□□□ -1.71
RAB3C-201ENST00000282878 TSNAXIP1Q2TAA8 658 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 SSH3Q8TE77 659 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 RBSNQ9H1K0 784 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 DBNLQ9UJU6 430 aaKnown RBP4.38□□□□□ -1.71
RAB3C-201ENST00000282878 EVX2Q03828 476 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 BRF1Q92994 677 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 ZKSCAN3Q9BRR0 538 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 PDRG1Q9NUG6 133 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 S100BP04271 92 aaPredicted RBP4.38□□□□□ -1.71
RAB3C-201ENST00000282878 KRT18P05783 430 aaKnown RBP4.38□□□□□ -1.71
RAB3C-201ENST00000282878 RPAINQ86UA6 219 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 FMNL2Q96PY5 1086 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 NEURL1BA8MQ27 555 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 SETSIPP0DME0 302 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 C8orf37Q96NL8 207 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 DDX21Q9NR30 783 aaKnown RBP eCLIP4.38□□□□□ -1.71
RAB3C-201ENST00000282878 PTPRCP08575 1304 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 TET3O43151 1660 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 GRM8O00222 908 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 SEMA3EO15041 775 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 TCF3P15923 654 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 ST3GAL1Q11201 340 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 ECHDC1Q9NTX5 307 aa4.38□□□□□ -1.71
RAB3C-201ENST00000282878 RNF216Q9NWF9 866 aaPredicted RBP4.38□□□□□ -1.71
RAB3C-201ENST00000282878 USP5P45974 858 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 NEXNQ0ZGT2 675 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 TMOD3Q9NYL9 352 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 TRMT112Q9UI30 125 aaKnown RBP4.37□□□□□ -1.71
RAB3C-201ENST00000282878 hCG_1642624A0A1W2PR95 340 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 SNRPA1P09661 255 aaKnown RBP4.37□□□□□ -1.71
RAB3C-201ENST00000282878 APOBRQ0VD83 1088 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 ISM2Q6H9L7 571 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 MIGA1Q8NAN2 632 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 SRP68Q9UHB9 627 aaKnown RBP4.37□□□□□ -1.71
RAB3C-201ENST00000282878 IVNS1ABPQ9Y6Y0 642 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 HMGB3O15347 200 aaKnown RBP4.37□□□□□ -1.71
RAB3C-201ENST00000282878 GJB2P29033 226 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 ZAP70P43403 619 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 PDE4DQ08499 809 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 KIAA1211Q6ZU35 1233 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 C3orf67Q6ZVT6 689 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 SSH2Q76I76 1423 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 RUFY3Q7L099 469 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 TSC1Q92574 1164 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 ARHGEF1Q92888 912 aaKnown RBP4.37□□□□□ -1.71
RAB3C-201ENST00000282878 SENP2Q9HC62 589 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 R3HCC1Q9Y3T6 440 aaKnown RBP4.37□□□□□ -1.71
RAB3C-201ENST00000282878 MYO3AQ8NEV4 1616 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 RRP12Q5JTH9 1297 aaKnown RBP4.37□□□□□ -1.71
RAB3C-201ENST00000282878 NOC3LQ8WTT2 800 aaKnown RBP4.37□□□□□ -1.71
RAB3C-201ENST00000282878 IDH1O75874 414 aaKnown RBP4.37□□□□□ -1.71
RAB3C-201ENST00000282878 BARGINQ6ZT62 677 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 GPT2Q8TD30 523 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 KIF1BPQ96EK5 621 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 UIMC1Q96RL1 719 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 MYCBPQ99417 103 aaPredicted RBP4.37□□□□□ -1.71
RAB3C-201ENST00000282878 TMEM63CQ9P1W3 806 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 ARHGEF10O15013 1369 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 SND1Q7KZF4 910 aaKnown RBP eCLIP4.37□□□□□ -1.71
RAB3C-201ENST00000282878 DZIP1Q86YF9 867 aaKnown RBP4.37□□□□□ -1.71
RAB3C-201ENST00000282878 FAM117AQ9C073 453 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 LSG1Q9H089 658 aaKnown RBP4.37□□□□□ -1.71
RAB3C-201ENST00000282878 TPCN1Q9ULQ1 816 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 CFAP74Q9C0B2 1584 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 PRKAB2O43741 272 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 SLMAPQ14BN4 828 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 CKAP2LQ8IYA6 745 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 LINS1Q8NG48 757 aa4.37□□□□□ -1.71
RAB3C-201ENST00000282878 PRDM1O75626 825 aa4.36□□□□□ -1.71
RAB3C-201ENST00000282878 DNM1Q05193 864 aaKnown RBP4.36□□□□□ -1.71
RAB3C-201ENST00000282878 GREM2Q9H772 168 aa4.36□□□□□ -1.71
RAB3C-201ENST00000282878 GRPEL1Q9HAV7 217 aa4.36□□□□□ -1.71
RAB3C-201ENST00000282878 ZNF500O60304 480 aaPredicted RBP4.36□□□□□ -1.71
RAB3C-201ENST00000282878 TNNI3KQ59H18 835 aa4.36□□□□□ -1.71
RAB3C-201ENST00000282878 GIMAP6Q6P9H5 292 aa4.36□□□□□ -1.71
RAB3C-201ENST00000282878 FPGT-TNNI3KV9GXZ4 949 aa4.36□□□□□ -1.71
RAB3C-201ENST00000282878 IL2RBP14784 551 aa4.36□□□□□ -1.71
RAB3C-201ENST00000282878 AIFM3Q96NN9 605 aa4.36□□□□□ -1.71
RAB3C-201ENST00000282878 C1orf167Q5SNV9 1468 aa4.36□□□□□ -1.71
RAB3C-201ENST00000282878 ST18O60284 1047 aa4.36□□□□□ -1.71
RAB3C-201ENST00000282878 RAB11FIP3O75154 756 aa4.36□□□□□ -1.71
RAB3C-201ENST00000282878 TNNT3P45378 269 aaPredicted RBP4.36□□□□□ -1.71
RAB3C-201ENST00000282878 RAB3GAP1Q15042 981 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms