RNA–Protein interactions for RNA: ENST00000272454.10

RGPD5-202, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 2 BASIC

Gene RGPD5, Length 2,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-202ENST00000272454 PDIA6Q15084 440 aa18.16■□□□□ 0.5
RGPD5-202ENST00000272454 CHST3Q7LGC8 479 aa18.16■□□□□ 0.5
RGPD5-202ENST00000272454 CCAR1Q8IX12 1150 aaKnown RBP18.16■□□□□ 0.5
RGPD5-202ENST00000272454 CCDC112Q8NEF3 446 aa18.16■□□□□ 0.5
RGPD5-202ENST00000272454 SYTL4Q96C24 671 aaPredicted RBP18.16■□□□□ 0.5
RGPD5-202ENST00000272454 GOLGA6L19H0YKK7 550 aa18.16■□□□□ 0.5
RGPD5-202ENST00000272454 ADD1P35611 737 aaKnown RBP18.15■□□□□ 0.5
RGPD5-202ENST00000272454 APOBRQ0VD83 1088 aa18.15■□□□□ 0.5
RGPD5-202ENST00000272454 LRRC8AQ8IWT6 810 aa18.15■□□□□ 0.5
RGPD5-202ENST00000272454 DBNDD2Q9BQY9 259 aa18.15■□□□□ 0.5
RGPD5-202ENST00000272454 IRX5P78411 483 aaPredicted RBP18.15■□□□□ 0.5
RGPD5-202ENST00000272454 CEP135Q66GS9 1140 aa18.15■□□□□ 0.5
RGPD5-202ENST00000272454 XAGE3Q8WTP9 111 aa18.15■□□□□ 0.5
RGPD5-202ENST00000272454 MED1Q15648 1581 aaPredicted RBP18.14■□□□□ 0.5
RGPD5-202ENST00000272454 NPHP1O15259 732 aa18.14■□□□□ 0.49
RGPD5-202ENST00000272454 PSME1Q06323 249 aa18.14■□□□□ 0.49
RGPD5-202ENST00000272454 USP28Q96RU2 1077 aa18.14■□□□□ 0.49
RGPD5-202ENST00000272454 CTNNA3Q9UI47 895 aa18.14■□□□□ 0.49
RGPD5-202ENST00000272454 ZNF609O15014 1411 aa18.14■□□□□ 0.49
RGPD5-202ENST00000272454 HMG20BQ9P0W2 317 aa18.14■□□□□ 0.49
RGPD5-202ENST00000272454 NEURL1BA8MQ27 555 aa18.13■□□□□ 0.49
RGPD5-202ENST00000272454 CTDNEP1O95476 244 aa18.13■□□□□ 0.49
RGPD5-202ENST00000272454 ESCO1Q5FWF5 840 aa18.13■□□□□ 0.49
RGPD5-202ENST00000272454 COPS6Q7L5N1 327 aa18.13■□□□□ 0.49
RGPD5-202ENST00000272454 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.13■□□□□ 0.49
RGPD5-202ENST00000272454 DDX21Q9NR30 783 aaKnown RBP eCLIP18.13■□□□□ 0.49
RGPD5-202ENST00000272454 SKILP12757 684 aa18.13■□□□□ 0.49
RGPD5-202ENST00000272454 GABPB1Q06547 395 aaPredicted RBP18.13■□□□□ 0.49
RGPD5-202ENST00000272454 ALDH8A1Q9H2A2 487 aaPredicted RBP18.13■□□□□ 0.49
RGPD5-202ENST00000272454 RGPD2P0DJD1 1756 aa18.13■□□□□ 0.49
RGPD5-202ENST00000272454 ATP5J2-PTCD1G3V325 749 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 PTCD1O75127 700 aaKnown RBP18.12■□□□□ 0.49
RGPD5-202ENST00000272454 DDX58O95786 925 aaKnown RBP18.12■□□□□ 0.49
RGPD5-202ENST00000272454 GCKRQ14397 625 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 USPL1Q5W0Q7 1092 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 ZNF215Q9UL58 517 aaPredicted RBP18.12■□□□□ 0.49
RGPD5-202ENST00000272454 KDM3BQ7LBC6 1761 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 BECN2A8MW95 431 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 TSGA10IPQ3SY00 556 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 TNNI3KQ59H18 835 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 FPGT-TNNI3KV9GXZ4 949 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 UTYO14607 1347 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 PTPDC1A2A3K4 754 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 CCDC69A6NI79 296 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 SNW1Q13573 536 aaKnown RBP18.12■□□□□ 0.49
RGPD5-202ENST00000272454 OTUD7BQ6GQQ9 843 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 KLHL34Q8N239 644 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 NSUN7Q8NE18 718 aaKnown RBP18.12■□□□□ 0.49
RGPD5-202ENST00000272454 CHMP4AQ9BY43 222 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 TAOK2Q9UL54 1235 aa18.12■□□□□ 0.49
RGPD5-202ENST00000272454 ERICH4A6NGS2 130 aa18.11■□□□□ 0.49
RGPD5-202ENST00000272454 SLFN14P0C7P3 912 aa18.11■□□□□ 0.49
RGPD5-202ENST00000272454 UBE3BQ7Z3V4 1068 aa18.11■□□□□ 0.49
RGPD5-202ENST00000272454 DHX40Q8IX18 779 aaKnown RBP18.11■□□□□ 0.49
RGPD5-202ENST00000272454 AOPEPQ8N6M6 819 aa18.11■□□□□ 0.49
RGPD5-202ENST00000272454 CFAP45Q9UL16 551 aa18.11■□□□□ 0.49
RGPD5-202ENST00000272454 AXIN2Q9Y2T1 843 aa18.11■□□□□ 0.49
RGPD5-202ENST00000272454 ME1P48163 572 aa18.1■□□□□ 0.49
RGPD5-202ENST00000272454 PTPN12Q05209 780 aaKnown RBP18.1■□□□□ 0.49
RGPD5-202ENST00000272454 ANKRD24Q8TF21 1146 aa18.1■□□□□ 0.49
RGPD5-202ENST00000272454 GPHNQ9NQX3 736 aaPredicted RBP18.1■□□□□ 0.49
RGPD5-202ENST00000272454 HDAC5Q9UQL6 1122 aa18.1■□□□□ 0.49
RGPD5-202ENST00000272454 CCDC66A2RUB6 948 aa18.1■□□□□ 0.49
RGPD5-202ENST00000272454 ATP5JP18859 108 aa18.1■□□□□ 0.49
RGPD5-202ENST00000272454 KRT32Q14532 448 aa18.1■□□□□ 0.49
RGPD5-202ENST00000272454 STX1AQ16623 288 aa18.1■□□□□ 0.49
RGPD5-202ENST00000272454 FSIP1Q8NA03 581 aa18.1■□□□□ 0.49
RGPD5-202ENST00000272454 JCADQ9P266 1359 aa18.1■□□□□ 0.49
RGPD5-202ENST00000272454 ADGRL3Q9HAR2 1447 aa18.09■□□□□ 0.49
RGPD5-202ENST00000272454 LTN1O94822 1766 aa18.09■□□□□ 0.49
RGPD5-202ENST00000272454 NEXNQ0ZGT2 675 aa18.09■□□□□ 0.49
RGPD5-202ENST00000272454 PTPN14Q15678 1187 aa18.09■□□□□ 0.49
RGPD5-202ENST00000272454 RAB11FIP4Q86YS3 637 aa18.09■□□□□ 0.49
RGPD5-202ENST00000272454 ZSCAN16Q9H4T2 348 aaPredicted RBP18.09■□□□□ 0.49
RGPD5-202ENST00000272454 PAXBP1Q9Y5B6 917 aa18.09■□□□□ 0.49
RGPD5-202ENST00000272454 HEG1Q9ULI3 1381 aa18.09■□□□□ 0.49
RGPD5-202ENST00000272454 CCZ1BP86790 482 aa18.09■□□□□ 0.49
RGPD5-202ENST00000272454 CCZ1P86791 482 aaPredicted RBP18.09■□□□□ 0.49
RGPD5-202ENST00000272454 MCMDC2Q4G0Z9 681 aa18.09■□□□□ 0.49
RGPD5-202ENST00000272454 AMOTQ4VCS5 1084 aa18.09■□□□□ 0.49
RGPD5-202ENST00000272454 CCDC73Q6ZRK6 1079 aa18.09■□□□□ 0.49
RGPD5-202ENST00000272454 ILDR1Q86SU0 546 aaPredicted RBP18.09■□□□□ 0.49
RGPD5-202ENST00000272454 SMARCC2Q8TAQ2 1214 aa18.09■□□□□ 0.49
RGPD5-202ENST00000272454 RCOR1Q9UKL0 485 aa18.09■□□□□ 0.49
RGPD5-202ENST00000272454 A0A1B0GVL5 298 aa18.08■□□□□ 0.49
RGPD5-202ENST00000272454 GOLIM4O00461 696 aa18.08■□□□□ 0.49
RGPD5-202ENST00000272454 KINO60870 393 aaKnown RBP18.08■□□□□ 0.49
RGPD5-202ENST00000272454 RFX5P48382 616 aaPredicted RBP18.08■□□□□ 0.49
RGPD5-202ENST00000272454 DDX41Q9UJV9 622 aaKnown RBP18.08■□□□□ 0.49
RGPD5-202ENST00000272454 U3KPZ7 1027 aaPredicted RBP18.08■□□□□ 0.49
RGPD5-202ENST00000272454 CHD2O14647 1828 aaKnown RBP18.08■□□□□ 0.48
RGPD5-202ENST00000272454 GCP02774 474 aa18.08■□□□□ 0.48
RGPD5-202ENST00000272454 KMT5BQ4FZB7 885 aa18.08■□□□□ 0.48
RGPD5-202ENST00000272454 NEUROD6Q96NK8 337 aa18.08■□□□□ 0.48
RGPD5-202ENST00000272454 FMNL2Q96PY5 1086 aa18.08■□□□□ 0.48
RGPD5-202ENST00000272454 ANKARQ7Z5J8 1434 aa18.07■□□□□ 0.48
RGPD5-202ENST00000272454 BIN1O00499 593 aa18.07■□□□□ 0.48
RGPD5-202ENST00000272454 PFKFB2O60825 505 aa18.07■□□□□ 0.48
RGPD5-202ENST00000272454 CDC25BP30305 580 aa18.07■□□□□ 0.48
RGPD5-202ENST00000272454 ELF2Q15723 593 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms