RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 SYT17Q9BSW7 474 aa10.56□□□□□ -0.72
TRIM43-201ENST00000272395 FOXD4L1Q9NU39 408 aa10.56□□□□□ -0.72
TRIM43-201ENST00000272395 EXOC6BQ9Y2D4 811 aa10.56□□□□□ -0.72
TRIM43-201ENST00000272395 SH3TC1Q8TE82 1336 aa10.55□□□□□ -0.72
TRIM43-201ENST00000272395 DPEP1P16444 411 aa10.55□□□□□ -0.72
TRIM43-201ENST00000272395 UBE3BQ7Z3V4 1068 aa10.55□□□□□ -0.72
TRIM43-201ENST00000272395 ZBTB38Q8NAP3 1195 aaPredicted RBP10.55□□□□□ -0.72
TRIM43-201ENST00000272395 BRIP1Q9BX63 1249 aa10.55□□□□□ -0.72
TRIM43-201ENST00000272395 PANK2Q9BZ23 570 aa10.55□□□□□ -0.72
TRIM43-201ENST00000272395 USP44Q9H0E7 712 aa10.55□□□□□ -0.72
TRIM43-201ENST00000272395 CD2APQ9Y5K6 639 aa10.55□□□□□ -0.72
TRIM43-201ENST00000272395 DDX49Q9Y6V7 483 aaKnown RBP10.55□□□□□ -0.72
TRIM43-201ENST00000272395 NRXN2Q9P2S2 1712 aa10.54□□□□□ -0.72
TRIM43-201ENST00000272395 PNMA6EA0A0J9YXQ4 647 aa10.54□□□□□ -0.72
TRIM43-201ENST00000272395 IRS4O14654 1257 aaPredicted RBP10.54□□□□□ -0.72
TRIM43-201ENST00000272395 PCCAP05165 728 aaPredicted RBP10.54□□□□□ -0.72
TRIM43-201ENST00000272395 C2CD5Q86YS7 1000 aa10.54□□□□□ -0.72
TRIM43-201ENST00000272395 LRRFIP2Q9Y608 721 aaKnown RBP10.54□□□□□ -0.72
TRIM43-201ENST00000272395 ANKRD36CQ5JPF3 1778 aa10.54□□□□□ -0.72
TRIM43-201ENST00000272395 AFDNP55196 1824 aaKnown RBP10.54□□□□□ -0.72
TRIM43-201ENST00000272395 H7C1W4 665 aa10.53□□□□□ -0.72
TRIM43-201ENST00000272395 ALDH1L1O75891 902 aa10.53□□□□□ -0.72
TRIM43-201ENST00000272395 CHMLP26374 656 aa10.53□□□□□ -0.72
TRIM43-201ENST00000272395 CLCN1P35523 988 aa10.53□□□□□ -0.72
TRIM43-201ENST00000272395 ZNF445P59923 1031 aa10.53□□□□□ -0.72
TRIM43-201ENST00000272395 POLA2Q14181 598 aa10.53□□□□□ -0.72
TRIM43-201ENST00000272395 HSP90AB4PQ58FF6 505 aa10.53□□□□□ -0.72
TRIM43-201ENST00000272395 INTS4Q96HW7 963 aaKnown RBP10.53□□□□□ -0.72
TRIM43-201ENST00000272395 HDAC5Q9UQL6 1122 aa10.53□□□□□ -0.72
TRIM43-201ENST00000272395 TNRC6CQ9HCJ0 1690 aaKnown RBP10.53□□□□□ -0.72
TRIM43-201ENST00000272395 GRM8O00222 908 aa10.53□□□□□ -0.72
TRIM43-201ENST00000272395 KCNA3P22001 575 aa10.53□□□□□ -0.72
TRIM43-201ENST00000272395 CASP7P55210 303 aa10.53□□□□□ -0.72
TRIM43-201ENST00000272395 CUL4AQ13619 759 aa10.53□□□□□ -0.72
TRIM43-201ENST00000272395 CCDC85AQ96PX6 553 aaPredicted RBP10.53□□□□□ -0.72
TRIM43-201ENST00000272395 NBPF7P0C2Y1 421 aaPredicted RBP10.52□□□□□ -0.73
TRIM43-201ENST00000272395 PDE6BP35913 854 aa10.52□□□□□ -0.73
TRIM43-201ENST00000272395 NEK4P51957 841 aa10.52□□□□□ -0.73
TRIM43-201ENST00000272395 TGFB2P61812 414 aa10.52□□□□□ -0.73
TRIM43-201ENST00000272395 CCDC173Q0VFZ6 552 aa10.52□□□□□ -0.73
TRIM43-201ENST00000272395 SLC10A5Q5PT55 438 aa10.52□□□□□ -0.73
TRIM43-201ENST00000272395 ZNF622Q969S3 477 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRIM43-201ENST00000272395 RRAGDQ9NQL2 400 aaPredicted RBP10.52□□□□□ -0.73
TRIM43-201ENST00000272395 LMBRD1Q9NUN5 540 aa10.52□□□□□ -0.73
TRIM43-201ENST00000272395 C9orf78Q9NZ63 289 aaPredicted RBP10.52□□□□□ -0.73
TRIM43-201ENST00000272395 H0YIN7 160 aa10.51□□□□□ -0.73
TRIM43-201ENST00000272395 SRGNP10124 158 aa10.51□□□□□ -0.73
TRIM43-201ENST00000272395 EPHA10Q5JZY3 1008 aa10.51□□□□□ -0.73
TRIM43-201ENST00000272395 MCTP1Q6DN14 999 aa10.51□□□□□ -0.73
TRIM43-201ENST00000272395 SLC51AQ86UW1 340 aa10.51□□□□□ -0.73
TRIM43-201ENST00000272395 GAS2L3Q86XJ1 694 aa10.51□□□□□ -0.73
TRIM43-201ENST00000272395 ANP32BQ92688 251 aaKnown RBP10.51□□□□□ -0.73
TRIM43-201ENST00000272395 KIF1BPQ96EK5 621 aa10.51□□□□□ -0.73
TRIM43-201ENST00000272395 SUCLG2Q96I99 432 aa10.51□□□□□ -0.73
TRIM43-201ENST00000272395 TMX3Q96JJ7 454 aa10.51□□□□□ -0.73
TRIM43-201ENST00000272395 NLRP3Q96P20 1036 aa10.51□□□□□ -0.73
TRIM43-201ENST00000272395 GOLGB1Q14789 3259 aaKnown RBP10.51□□□□□ -0.73
TRIM43-201ENST00000272395 ANKRD31Q8N7Z5 1873 aa10.51□□□□□ -0.73
TRIM43-201ENST00000272395 KLRG2A4D1S0 409 aaPredicted RBP10.5□□□□□ -0.73
TRIM43-201ENST00000272395 TRIM6-TRIM34B2RNG4 842 aa10.5□□□□□ -0.73
TRIM43-201ENST00000272395 CRY2Q49AN0 593 aa10.5□□□□□ -0.73
TRIM43-201ENST00000272395 TRIM44Q96DX7 344 aaPredicted RBP10.5□□□□□ -0.73
TRIM43-201ENST00000272395 PPP1R9BQ96SB3 815 aa10.5□□□□□ -0.73
TRIM43-201ENST00000272395 CDHR2Q9BYE9 1310 aa10.5□□□□□ -0.73
TRIM43-201ENST00000272395 RIC1Q4ADV7 1423 aa10.5□□□□□ -0.73
TRIM43-201ENST00000272395 KIAA1551Q9HCM1 1747 aa10.5□□□□□ -0.73
TRIM43-201ENST00000272395 PDE8AO60658 829 aa10.5□□□□□ -0.73
TRIM43-201ENST00000272395 MBD3O95983 291 aa10.5□□□□□ -0.73
TRIM43-201ENST00000272395 CTSWP56202 376 aa10.5□□□□□ -0.73
TRIM43-201ENST00000272395 MTX1Q13505 466 aa10.5□□□□□ -0.73
TRIM43-201ENST00000272395 RPGRQ92834 1020 aaKnown RBP10.5□□□□□ -0.73
TRIM43-201ENST00000272395 RILPL2Q969X0 211 aa10.5□□□□□ -0.73
TRIM43-201ENST00000272395 ANO2Q9NQ90 1003 aa10.5□□□□□ -0.73
TRIM43-201ENST00000272395 COL11A2P13942 1736 aaPredicted RBP10.49□□□□□ -0.73
TRIM43-201ENST00000272395 KIF13BQ9NQT8 1826 aa10.49□□□□□ -0.73
TRIM43-201ENST00000272395 ESPNB1AK53 854 aa10.49□□□□□ -0.73
TRIM43-201ENST00000272395 SURF6O75683 361 aaKnown RBP10.49□□□□□ -0.73
TRIM43-201ENST00000272395 NPR1P16066 1061 aa10.49□□□□□ -0.73
TRIM43-201ENST00000272395 HSPA4P34932 840 aa10.49□□□□□ -0.73
TRIM43-201ENST00000272395 NASPP49321 788 aaPredicted RBP10.49□□□□□ -0.73
TRIM43-201ENST00000272395 FOXO4P98177 505 aa10.49□□□□□ -0.73
TRIM43-201ENST00000272395 ZGPATQ8N5A5 531 aaKnown RBP10.49□□□□□ -0.73
TRIM43-201ENST00000272395 RHPN1Q8TCX5 695 aa10.49□□□□□ -0.73
TRIM43-201ENST00000272395 MASTLQ96GX5 879 aa10.49□□□□□ -0.73
TRIM43-201ENST00000272395 KAZALD1Q96I82 304 aa10.49□□□□□ -0.73
TRIM43-201ENST00000272395 ZNF219Q9P2Y4 722 aaPredicted RBP10.49□□□□□ -0.73
TRIM43-201ENST00000272395 ZDHHC9Q9Y397 364 aa10.49□□□□□ -0.73
TRIM43-201ENST00000272395 UTYO14607 1347 aa10.49□□□□□ -0.73
TRIM43-201ENST00000272395 TTC41PQ6P2S7 1318 aa10.49□□□□□ -0.73
TRIM43-201ENST00000272395 BRD1O95696 1058 aa10.48□□□□□ -0.73
TRIM43-201ENST00000272395 YBX3P16989 372 aaKnown RBP eCLIP10.48□□□□□ -0.73
TRIM43-201ENST00000272395 ZSCAN23Q3MJ62 389 aa10.48□□□□□ -0.73
TRIM43-201ENST00000272395 STYK1Q6J9G0 422 aa10.48□□□□□ -0.73
TRIM43-201ENST00000272395 TTLL11Q8NHH1 800 aa10.48□□□□□ -0.73
TRIM43-201ENST00000272395 GREM2Q9H772 168 aa10.48□□□□□ -0.73
TRIM43-201ENST00000272395 SEC31BQ9NQW1 1179 aa10.48□□□□□ -0.73
TRIM43-201ENST00000272395 PIM2Q9P1W9 311 aa10.48□□□□□ -0.73
TRIM43-201ENST00000272395 BCS1LQ9Y276 419 aa10.48□□□□□ -0.73
TRIM43-201ENST00000272395 DDX60Q8IY21 1712 aaKnown RBP10.48□□□□□ -0.73
TRIM43-201ENST00000272395 COL4A1P02462 1669 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms