RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 CALD1Q05682 793 aaKnown RBP9.46□□□□□ -0.89
ZIM3-201ENST00000269834 TMEM92Q6UXU6 159 aa9.46□□□□□ -0.89
ZIM3-201ENST00000269834 ARMC5Q96C12 935 aa9.46□□□□□ -0.89
ZIM3-201ENST00000269834 SPC25Q9HBM1 224 aa9.46□□□□□ -0.89
ZIM3-201ENST00000269834 NRKQ7Z2Y5 1582 aa9.46□□□□□ -0.89
ZIM3-201ENST00000269834 RAPGEF3O95398 923 aa9.46□□□□□ -0.9
ZIM3-201ENST00000269834 LDHBP07195 334 aaKnown RBP9.46□□□□□ -0.9
ZIM3-201ENST00000269834 FDX1P10109 184 aa9.46□□□□□ -0.9
ZIM3-201ENST00000269834 RIPK4P57078 832 aa9.46□□□□□ -0.9
ZIM3-201ENST00000269834 GNL2Q13823 731 aaKnown RBP9.46□□□□□ -0.9
ZIM3-201ENST00000269834 RAB3GAP1Q15042 981 aa9.46□□□□□ -0.9
ZIM3-201ENST00000269834 TAS1R3Q7RTX0 852 aa9.46□□□□□ -0.9
ZIM3-201ENST00000269834 CXXC1Q9P0U4 656 aaPredicted RBP9.46□□□□□ -0.9
ZIM3-201ENST00000269834 KNDC1Q76NI1 1749 aa9.45□□□□□ -0.9
ZIM3-201ENST00000269834 FYB1O15117 783 aa9.45□□□□□ -0.9
ZIM3-201ENST00000269834 PDGFRBP09619 1106 aa9.45□□□□□ -0.9
ZIM3-201ENST00000269834 MAMSTRQ6ZN01 415 aa9.45□□□□□ -0.9
ZIM3-201ENST00000269834 WDR75Q8IWA0 830 aaKnown RBP9.45□□□□□ -0.9
ZIM3-201ENST00000269834 GRPEL1Q9HAV7 217 aa9.45□□□□□ -0.9
ZIM3-201ENST00000269834 C3orf80F5H4A9 247 aa9.45□□□□□ -0.9
ZIM3-201ENST00000269834 TNFRSF10BO14763 440 aa9.45□□□□□ -0.9
ZIM3-201ENST00000269834 LMOD3Q0VAK6 560 aa9.45□□□□□ -0.9
ZIM3-201ENST00000269834 CLEC17AQ6ZS10 378 aa9.45□□□□□ -0.9
ZIM3-201ENST00000269834 RNPC3Q96LT9 517 aaKnown RBP9.45□□□□□ -0.9
ZIM3-201ENST00000269834 MPHOSPH6Q99547 160 aaKnown RBP9.45□□□□□ -0.9
ZIM3-201ENST00000269834 ABCC4O15439 1325 aa9.45□□□□□ -0.9
ZIM3-201ENST00000269834 AKAP12Q02952 1782 aa9.44□□□□□ -0.9
ZIM3-201ENST00000269834 RIMS1Q86UR5 1692 aaKnown RBP9.44□□□□□ -0.9
ZIM3-201ENST00000269834 NAA30Q147X3 362 aaPredicted RBP9.44□□□□□ -0.9
ZIM3-201ENST00000269834 TSGA10IPQ3SY00 556 aa9.44□□□□□ -0.9
ZIM3-201ENST00000269834 HDGFL2Q7Z4V5 671 aaPredicted RBP9.44□□□□□ -0.9
ZIM3-201ENST00000269834 PLEKHM2Q8IWE5 1019 aa9.44□□□□□ -0.9
ZIM3-201ENST00000269834 STK10O94804 968 aaKnown RBP9.44□□□□□ -0.9
ZIM3-201ENST00000269834 FGRP09769 529 aa9.44□□□□□ -0.9
ZIM3-201ENST00000269834 SWI5Q1ZZU3 235 aa9.44□□□□□ -0.9
ZIM3-201ENST00000269834 GGT6Q6P531 493 aa9.44□□□□□ -0.9
ZIM3-201ENST00000269834 GGNBP2Q9H3C7 697 aa9.44□□□□□ -0.9
ZIM3-201ENST00000269834 ITSN1Q15811 1721 aa9.43□□□□□ -0.9
ZIM3-201ENST00000269834 UBAP1LF5GYI3 381 aa9.43□□□□□ -0.9
ZIM3-201ENST00000269834 PRC1O43663 620 aa9.43□□□□□ -0.9
ZIM3-201ENST00000269834 KRBA2Q6ZNG9 492 aa9.43□□□□□ -0.9
ZIM3-201ENST00000269834 BRINP2Q9C0B6 783 aa9.43□□□□□ -0.9
ZIM3-201ENST00000269834 CCDC85CA6NKD9 419 aa9.43□□□□□ -0.9
ZIM3-201ENST00000269834 HSP90AB1P08238 724 aaKnown RBP9.43□□□□□ -0.9
ZIM3-201ENST00000269834 C1orf216Q8TAB5 229 aa9.43□□□□□ -0.9
ZIM3-201ENST00000269834 TNPO1Q92973 898 aaKnown RBP9.43□□□□□ -0.9
ZIM3-201ENST00000269834 KIF2CQ99661 725 aa9.43□□□□□ -0.9
ZIM3-201ENST00000269834 MTA3Q9BTC8 594 aa9.43□□□□□ -0.9
ZIM3-201ENST00000269834 PANK2Q9BZ23 570 aa9.43□□□□□ -0.9
ZIM3-201ENST00000269834 ZBTB7BO15156 539 aaPredicted RBP9.42□□□□□ -0.9
ZIM3-201ENST00000269834 GIGYF1O75420 1035 aaPredicted RBP9.42□□□□□ -0.9
ZIM3-201ENST00000269834 SLAIN1Q8ND83 568 aa9.42□□□□□ -0.9
ZIM3-201ENST00000269834 CHST12Q9NRB3 414 aa9.42□□□□□ -0.9
ZIM3-201ENST00000269834 C3P01024 1663 aa9.42□□□□□ -0.9
ZIM3-201ENST00000269834 GJA5P36382 358 aa9.42□□□□□ -0.9
ZIM3-201ENST00000269834 FKBP4Q02790 459 aaKnown RBP eCLIP9.42□□□□□ -0.9
ZIM3-201ENST00000269834 MRPL50Q8N5N7 158 aaKnown RBP9.42□□□□□ -0.9
ZIM3-201ENST00000269834 PHF12Q96QT6 1004 aa9.42□□□□□ -0.9
ZIM3-201ENST00000269834 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.42□□□□□ -0.9
ZIM3-201ENST00000269834 CPSF1Q10570 1443 aaKnown RBP9.42□□□□□ -0.9
ZIM3-201ENST00000269834 XRCC5P13010 732 aaKnown RBP9.41□□□□□ -0.9
ZIM3-201ENST00000269834 NFE2L2Q16236 605 aa9.41□□□□□ -0.9
ZIM3-201ENST00000269834 AATKQ6ZMQ8 1374 aa9.41□□□□□ -0.9
ZIM3-201ENST00000269834 MRFAP1L1Q96HT8 127 aa9.41□□□□□ -0.9
ZIM3-201ENST00000269834 EDC4Q6P2E9 1401 aaKnown RBP9.41□□□□□ -0.9
ZIM3-201ENST00000269834 TREHO43280 583 aa9.41□□□□□ -0.9
ZIM3-201ENST00000269834 GNAI1P63096 354 aa9.41□□□□□ -0.9
ZIM3-201ENST00000269834 PSMD2Q13200 908 aa9.41□□□□□ -0.9
ZIM3-201ENST00000269834 FAM198AQ9UFP1 575 aa9.41□□□□□ -0.9
ZIM3-201ENST00000269834 CDC45O75419 566 aa9.4□□□□□ -0.9
ZIM3-201ENST00000269834 PHF14O94880 888 aa9.4□□□□□ -0.9
ZIM3-201ENST00000269834 ZNF853P0CG23 659 aa9.4□□□□□ -0.9
ZIM3-201ENST00000269834 BDNFP23560 247 aa9.4□□□□□ -0.9
ZIM3-201ENST00000269834 TMC4Q7Z404 712 aa9.4□□□□□ -0.9
ZIM3-201ENST00000269834 CCAR1Q8IX12 1150 aaKnown RBP9.4□□□□□ -0.9
ZIM3-201ENST00000269834 SLF2Q8IX21 1173 aa9.4□□□□□ -0.9
ZIM3-201ENST00000269834 TUBGCP6Q96RT7 1819 aa9.4□□□□□ -0.9
ZIM3-201ENST00000269834 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.4□□□□□ -0.9
ZIM3-201ENST00000269834 VAMP4O75379 141 aa9.4□□□□□ -0.9
ZIM3-201ENST00000269834 USP5P45974 858 aa9.4□□□□□ -0.9
ZIM3-201ENST00000269834 GYS2P54840 703 aa9.4□□□□□ -0.9
ZIM3-201ENST00000269834 FMR1Q06787 632 aaKnown RBP eCLIP9.4□□□□□ -0.9
ZIM3-201ENST00000269834 MTMR2Q13614 643 aa9.4□□□□□ -0.9
ZIM3-201ENST00000269834 IDI1Q13907 227 aa9.4□□□□□ -0.9
ZIM3-201ENST00000269834 COL19A1Q14993 1142 aa9.4□□□□□ -0.9
ZIM3-201ENST00000269834 FAM126AQ9BYI3 521 aaPredicted RBP9.4□□□□□ -0.9
ZIM3-201ENST00000269834 ESPNB1AK53 854 aa9.39□□□□□ -0.91
ZIM3-201ENST00000269834 GOLGA6L22H0YM25 854 aa9.39□□□□□ -0.91
ZIM3-201ENST00000269834 HSPA1LP34931 641 aa9.39□□□□□ -0.91
ZIM3-201ENST00000269834 IL17RAQ96F46 866 aa9.39□□□□□ -0.91
ZIM3-201ENST00000269834 PRAM1Q96QH2 718 aa9.39□□□□□ -0.91
ZIM3-201ENST00000269834 API5Q9BZZ5 524 aaKnown RBP9.39□□□□□ -0.91
ZIM3-201ENST00000269834 METTL5Q9NRN9 209 aaKnown RBP9.39□□□□□ -0.91
ZIM3-201ENST00000269834 TCEAL9Q9UHQ7 104 aa9.39□□□□□ -0.91
ZIM3-201ENST00000269834 DDX41Q9UJV9 622 aaKnown RBP9.39□□□□□ -0.91
ZIM3-201ENST00000269834 N4BP2Q86UW6 1770 aaPredicted RBP9.39□□□□□ -0.91
ZIM3-201ENST00000269834 RIMS2Q9UQ26 1411 aa9.39□□□□□ -0.91
ZIM3-201ENST00000269834 PRKAR2BP31323 418 aa9.39□□□□□ -0.91
ZIM3-201ENST00000269834 RDH13Q8NBN7 331 aa9.39□□□□□ -0.91
ZIM3-201ENST00000269834 NFATC2IPQ8NCF5 419 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms