RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 COPS6Q7L5N1 327 aa20.1■□□□□ 0.81
SPG7-201ENST00000268704 A0A0G2JLW4 131 aa20.1■□□□□ 0.81
SPG7-201ENST00000268704 GCP02774 474 aa20.1■□□□□ 0.81
SPG7-201ENST00000268704 DMTNQ08495 405 aa20.1■□□□□ 0.81
SPG7-201ENST00000268704 USPL1Q5W0Q7 1092 aa20.1■□□□□ 0.81
SPG7-201ENST00000268704 STOX1Q6ZVD7 989 aa20.1■□□□□ 0.81
SPG7-201ENST00000268704 DBNDD2Q9BQY9 259 aa20.1■□□□□ 0.81
SPG7-201ENST00000268704 ALDH8A1Q9H2A2 487 aaPredicted RBP20.1■□□□□ 0.81
SPG7-201ENST00000268704 FGD1P98174 961 aa20.09■□□□□ 0.81
SPG7-201ENST00000268704 TSGA10IPQ3SY00 556 aa20.09■□□□□ 0.81
SPG7-201ENST00000268704 TNNI3KQ59H18 835 aa20.09■□□□□ 0.81
SPG7-201ENST00000268704 KCNH5Q8NCM2 988 aa20.09■□□□□ 0.81
SPG7-201ENST00000268704 ZNF592Q92610 1267 aa20.09■□□□□ 0.81
SPG7-201ENST00000268704 GOLPH3LQ9H4A5 285 aa20.09■□□□□ 0.81
SPG7-201ENST00000268704 FPGT-TNNI3KV9GXZ4 949 aa20.09■□□□□ 0.81
SPG7-201ENST00000268704 USP27XA6NNY8 438 aa20.08■□□□□ 0.81
SPG7-201ENST00000268704 USP16Q9Y5T5 823 aa20.08■□□□□ 0.81
SPG7-201ENST00000268704 GUCY1B3Q02153 619 aa20.08■□□□□ 0.81
SPG7-201ENST00000268704 NEXNQ0ZGT2 675 aa20.08■□□□□ 0.81
SPG7-201ENST00000268704 PDIA4P13667 645 aaKnown RBP20.08■□□□□ 0.8
SPG7-201ENST00000268704 CCT2P78371 535 aaKnown RBP20.08■□□□□ 0.8
SPG7-201ENST00000268704 UBE3BQ7Z3V4 1068 aa20.08■□□□□ 0.8
SPG7-201ENST00000268704 C5P01031 1676 aa20.08■□□□□ 0.8
SPG7-201ENST00000268704 PTPN12Q05209 780 aaKnown RBP20.07■□□□□ 0.8
SPG7-201ENST00000268704 TPD52L1Q16890 204 aaPredicted RBP20.07■□□□□ 0.8
SPG7-201ENST00000268704 NCOA5Q9HCD5 579 aaKnown RBP20.07■□□□□ 0.8
SPG7-201ENST00000268704 NAP1L2Q9ULW6 460 aaPredicted RBP20.07■□□□□ 0.8
SPG7-201ENST00000268704 NCAPD2Q15021 1401 aa20.07■□□□□ 0.8
SPG7-201ENST00000268704 APOBRQ0VD83 1088 aa20.07■□□□□ 0.8
SPG7-201ENST00000268704 IQCB1Q15051 598 aa20.07■□□□□ 0.8
SPG7-201ENST00000268704 ARHGEF25Q86VW2 580 aa20.07■□□□□ 0.8
SPG7-201ENST00000268704 ATP5J2-PTCD1G3V325 749 aa20.06■□□□□ 0.8
SPG7-201ENST00000268704 PTCD1O75127 700 aaKnown RBP20.06■□□□□ 0.8
SPG7-201ENST00000268704 ATP5JP18859 108 aa20.06■□□□□ 0.8
SPG7-201ENST00000268704 ADD1P35611 737 aaKnown RBP20.06■□□□□ 0.8
SPG7-201ENST00000268704 KRT32Q14532 448 aa20.06■□□□□ 0.8
SPG7-201ENST00000268704 ORAI2Q96SN7 254 aa20.06■□□□□ 0.8
SPG7-201ENST00000268704 MAPK8IP2Q13387 824 aaPredicted RBP20.06■□□□□ 0.8
SPG7-201ENST00000268704 ZNF790Q6PG37 636 aa20.06■□□□□ 0.8
SPG7-201ENST00000268704 CHST3Q7LGC8 479 aa20.06■□□□□ 0.8
SPG7-201ENST00000268704 CCAR1Q8IX12 1150 aaKnown RBP20.06■□□□□ 0.8
SPG7-201ENST00000268704 SIPA1L3O60292 1781 aaPredicted RBP20.06■□□□□ 0.8
SPG7-201ENST00000268704 CTDNEP1O95476 244 aa20.06■□□□□ 0.8
SPG7-201ENST00000268704 MRC1P22897 1456 aa20.05■□□□□ 0.8
SPG7-201ENST00000268704 GOLGA6L19H0YKK7 550 aa20.05■□□□□ 0.8
SPG7-201ENST00000268704 RFX5P48382 616 aaPredicted RBP20.05■□□□□ 0.8
SPG7-201ENST00000268704 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.05■□□□□ 0.8
SPG7-201ENST00000268704 NSUN7Q8NE18 718 aaKnown RBP20.05■□□□□ 0.8
SPG7-201ENST00000268704 USP28Q96RU2 1077 aa20.05■□□□□ 0.8
SPG7-201ENST00000268704 NFATC2IPQ8NCF5 419 aa20.04■□□□□ 0.8
SPG7-201ENST00000268704 METTL22Q9BUU2 404 aaPredicted RBP20.04■□□□□ 0.8
SPG7-201ENST00000268704 LAMA4Q16363 1823 aa20.04■□□□□ 0.8
SPG7-201ENST00000268704 SMTNL1A8MU46 457 aa20.04■□□□□ 0.8
SPG7-201ENST00000268704 FILIP1Q7Z7B0 1213 aa20.04■□□□□ 0.8
SPG7-201ENST00000268704 CFAP45Q9UL16 551 aa20.04■□□□□ 0.8
SPG7-201ENST00000268704 PTPDC1A2A3K4 754 aa20.04■□□□□ 0.8
SPG7-201ENST00000268704 MCMDC2Q4G0Z9 681 aa20.04■□□□□ 0.8
SPG7-201ENST00000268704 LRRC8AQ8IWT6 810 aa20.04■□□□□ 0.8
SPG7-201ENST00000268704 COPRSQ9NQ92 184 aa20.04■□□□□ 0.8
SPG7-201ENST00000268704 U3KPZ7 1027 aaPredicted RBP20.04■□□□□ 0.8
SPG7-201ENST00000268704 ZNF496Q96IT1 587 aaPredicted RBP20.03■□□□□ 0.8
SPG7-201ENST00000268704 ZSCAN16Q9H4T2 348 aaPredicted RBP20.03■□□□□ 0.8
SPG7-201ENST00000268704 SNW1Q13573 536 aaKnown RBP20.02■□□□□ 0.8
SPG7-201ENST00000268704 SMARCC2Q8TAQ2 1214 aa20.02■□□□□ 0.8
SPG7-201ENST00000268704 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.02■□□□□ 0.85e-6■■□□□ 11.9
SPG7-201ENST00000268704 V9GYY5 206 aaPredicted RBP20.02■□□□□ 0.8
SPG7-201ENST00000268704 MYH15Q9Y2K3 1946 aa20.02■□□□□ 0.8
SPG7-201ENST00000268704 ANKRD13DQ6ZTN6 518 aa20.02■□□□□ 0.8
SPG7-201ENST00000268704 CCDC112Q8NEF3 446 aa20.02■□□□□ 0.8
SPG7-201ENST00000268704 TRMT1Q9NXH9 659 aaKnown RBP20.02■□□□□ 0.8
SPG7-201ENST00000268704 RGPD5Q99666 1765 aa20.01■□□□□ 0.79
SPG7-201ENST00000268704 GOLIM4O00461 696 aa20.01■□□□□ 0.79
SPG7-201ENST00000268704 OVOS2A0A0G2JMS6 1433 aa20.01■□□□□ 0.79
SPG7-201ENST00000268704 PFKFB2O60825 505 aa20.01■□□□□ 0.79
SPG7-201ENST00000268704 ZC3H6P61129 1189 aaKnown RBP20.01■□□□□ 0.79
SPG7-201ENST00000268704 STX1AQ16623 288 aa20.01■□□□□ 0.79
SPG7-201ENST00000268704 UTP14CQ5TAP6 766 aaKnown RBP20.01■□□□□ 0.79
SPG7-201ENST00000268704 CEP135Q66GS9 1140 aa20.01■□□□□ 0.79
SPG7-201ENST00000268704 DHX40Q8IX18 779 aaKnown RBP20.01■□□□□ 0.79
SPG7-201ENST00000268704 BBXQ8WY36 941 aaPredicted RBP20.01■□□□□ 0.79
SPG7-201ENST00000268704 HAUS7Q99871 368 aa20.01■□□□□ 0.79
SPG7-201ENST00000268704 BECN2A8MW95 431 aa20■□□□□ 0.79
SPG7-201ENST00000268704 ILDR1Q86SU0 546 aaPredicted RBP20■□□□□ 0.79
SPG7-201ENST00000268704 NEUROD6Q96NK8 337 aa20■□□□□ 0.79
SPG7-201ENST00000268704 ME1P48163 572 aa20■□□□□ 0.79
SPG7-201ENST00000268704 AFDNP55196 1824 aaKnown RBP20■□□□□ 0.79
SPG7-201ENST00000268704 KDM6AO15550 1401 aaPredicted RBP20■□□□□ 0.79
SPG7-201ENST00000268704 PHRF1Q9P1Y6 1649 aaKnown RBP19.99■□□□□ 0.79
SPG7-201ENST00000268704 A0A087WZG4 1122 aa19.99■□□□□ 0.79
SPG7-201ENST00000268704 SKILP12757 684 aa19.99■□□□□ 0.79
SPG7-201ENST00000268704 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
SPG7-201ENST00000268704 RCOR1Q9UKL0 485 aa19.99■□□□□ 0.79
SPG7-201ENST00000268704 ZBTB22O15209 634 aa19.99■□□□□ 0.79
SPG7-201ENST00000268704 OTUD7BQ6GQQ9 843 aa19.99■□□□□ 0.79
SPG7-201ENST00000268704 CCDC73Q6ZRK6 1079 aa19.99■□□□□ 0.79
SPG7-201ENST00000268704 AOPEPQ8N6M6 819 aa19.99■□□□□ 0.79
SPG7-201ENST00000268704 FSIP1Q8NA03 581 aa19.99■□□□□ 0.79
SPG7-201ENST00000268704 SLC52A2Q9HAB3 445 aa19.99■□□□□ 0.79
SPG7-201ENST00000268704 GPHNQ9NQX3 736 aaPredicted RBP19.99■□□□□ 0.79
SPG7-201ENST00000268704 KINO60870 393 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms