RNA–Protein interactions for RNA: ENST00000265636.9

PPP6R3-201, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PPP6R3, Length 4,794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-201ENST00000265636 GOLGA6L9A6NEM1 432 aa12.32□□□□□ -0.44
PPP6R3-201ENST00000265636 GTF2F1P35269 517 aaKnown RBP eCLIP12.32□□□□□ -0.443e-12■■■■■ 48.6
PPP6R3-201ENST00000265636 RTN1Q16799 776 aa12.32□□□□□ -0.44
PPP6R3-201ENST00000265636 TCERG1LQ5VWI1 586 aa12.32□□□□□ -0.44
PPP6R3-201ENST00000265636 VPS36Q86VN1 386 aa12.32□□□□□ -0.44
PPP6R3-201ENST00000265636 ZHX1Q9UKY1 873 aaPredicted RBP12.32□□□□□ -0.44
PPP6R3-201ENST00000265636 KAT6BQ8WYB5 2073 aa12.32□□□□□ -0.44
PPP6R3-201ENST00000265636 MAP3K5Q99683 1374 aa12.32□□□□□ -0.44
PPP6R3-201ENST00000265636 HELBQ8NG08 1087 aaPredicted RBP12.32□□□□□ -0.44
PPP6R3-201ENST00000265636 KRT23Q9C075 422 aa12.32□□□□□ -0.44
PPP6R3-201ENST00000265636 CCDC178Q5BJE1 867 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 ESR2Q92731 530 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 RBSNQ9H1K0 784 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 RNF216Q9NWF9 866 aaPredicted RBP12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 TEX14Q8IWB6 1497 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 NPC1L1Q9UHC9 1359 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 CCDC171Q6TFL3 1326 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 PTPDC1A2A3K4 754 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 GCP02774 474 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 NBPF7P0C2Y1 421 aaPredicted RBP12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 PTGS1P23219 599 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 CCDC40Q4G0X9 1142 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 DHX32Q7L7V1 743 aaKnown RBP12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 ABCC1P33527 1531 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 BAG3O95817 575 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 HOXC9P31274 260 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 AMPD3Q01432 767 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 RRAGBQ5VZM2 374 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 FAM173BQ6P4H8 233 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 TRIM47Q96LD4 638 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 PLCD4Q9BRC7 762 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 CCDC113Q9H0I3 377 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 CFAP43Q8NDM7 1665 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 CCDC152Q4G0S7 254 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 KLHDC4Q8TBB5 520 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 JADE2Q9NQC1 790 aa12.31□□□□□ -0.44
PPP6R3-201ENST00000265636 CHL1O00533 1208 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 LDHCP07864 332 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 RXRAP19793 462 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 BMS1Q14692 1282 aaKnown RBP12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 IFIT1BQ5T764 474 aaKnown RBP12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 SPTY2D1Q68D10 685 aaPredicted RBP12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 AEBP2Q6ZN18 517 aaPredicted RBP12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 TMTC2Q8N394 836 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 ZFYVE9O95405 1425 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 GOLGA6L7A0A1B0GV03 622 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 RNF113AO15541 343 aaKnown RBP12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 TIMM10P62072 90 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 NGLY1Q96IV0 654 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 PNMA6EA0A0J9YXQ4 647 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 TRIM21P19474 475 aaKnown RBP12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 RTL1A6NKG5 1358 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 CTTNBP2Q8WZ74 1663 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 KIF20AO95235 890 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 MCM3P25205 808 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 CRNKL1Q9BZJ0 848 aaKnown RBP12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 CNNM2Q9H8M5 875 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 KIAA0556O60303 1618 aa12.3□□□□□ -0.44
PPP6R3-201ENST00000265636 YTHDC2Q9H6S0 1430 aaKnown RBP12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 ZMYM4Q5VZL5 1548 aa12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 UNC13AQ9UPW8 1703 aa12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 SHTN1A0MZ66 631 aa12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 MYO1BO43795 1136 aa12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 AKR1B10O60218 316 aa12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 LIG1P18858 919 aa12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 HLTFQ14527 1009 aaKnown RBP eCLIP12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 PAF1Q8N7H5 531 aa12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 TMCO5BA8MYB1 307 aa12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 HS1BP3Q53T59 392 aa12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 SLF2Q8IX21 1173 aa12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 DDX21Q9NR30 783 aaKnown RBP eCLIP12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 SHANK2Q9UPX8 1470 aa12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 SMARCC1Q92922 1105 aaPredicted RBP12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 DHX58Q96C10 678 aa12.29□□□□□ -0.44
PPP6R3-201ENST00000265636 RNMTO43148 476 aaKnown RBP12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 KCNA6P17658 529 aa12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 NOP2P46087 812 aaKnown RBP12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 TNIP1Q15025 636 aa12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 SPECC1Q5M775 1068 aa12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 CCDC129Q6ZRS4 1044 aa12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 ANKRD18AQ8IVF6 992 aa12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 PYM1Q9BRP8 204 aaKnown RBP12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 BCCIPQ9P287 314 aaKnown RBP eCLIP12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 IFFO1Q0D2I5 559 aa12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 NBPF6Q5VWK0 638 aa12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 NBPF5PQ86XG9 351 aaPredicted RBP12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 ACSBG1Q96GR2 724 aa12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 NBPF4Q96M43 638 aa12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 ALS2CR12Q96Q35 445 aa12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 RRAGDQ9NQL2 400 aaPredicted RBP12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 MIGA1Q8NAN2 632 aa12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 CUL5Q93034 780 aa12.28□□□□□ -0.44
PPP6R3-201ENST00000265636 A0A1B0GVL5 298 aa12.27□□□□□ -0.44
PPP6R3-201ENST00000265636 SF3B2Q13435 895 aaKnown RBP12.27□□□□□ -0.44
PPP6R3-201ENST00000265636 NAA16Q6N069 864 aaPredicted RBP12.27□□□□□ -0.44
PPP6R3-201ENST00000265636 DYDC1Q8WWB3 177 aa12.27□□□□□ -0.44
PPP6R3-201ENST00000265636 GOPCQ9HD26 462 aa12.27□□□□□ -0.44
PPP6R3-201ENST00000265636 WDR7Q9Y4E6 1490 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms