RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 ACTN2P35609 894 aa18.76■□□□□ 0.59
GPC1-201ENST00000264039 CHMP4BP1P59074 171 aa18.76■□□□□ 0.59
GPC1-201ENST00000264039 BAG1Q99933 345 aaPredicted RBP18.76■□□□□ 0.59
GPC1-201ENST00000264039 HDAC5Q9UQL6 1122 aa18.76■□□□□ 0.59
GPC1-201ENST00000264039 RAPGEF3O95398 923 aa18.76■□□□□ 0.59
GPC1-201ENST00000264039 TRIM29Q14134 588 aa18.76■□□□□ 0.59
GPC1-201ENST00000264039 KRT32Q14532 448 aa18.76■□□□□ 0.59
GPC1-201ENST00000264039 CWF19L2Q2TBE0 894 aaKnown RBP18.76■□□□□ 0.59
GPC1-201ENST00000264039 CTR9Q6PD62 1173 aa18.76■□□□□ 0.59
GPC1-201ENST00000264039 RALYLQ86SE5 291 aaKnown RBP18.76■□□□□ 0.59
GPC1-201ENST00000264039 NLRP6P59044 892 aa18.75■□□□□ 0.59
GPC1-201ENST00000264039 NFXL1Q6ZNB6 911 aa18.75■□□□□ 0.59
GPC1-201ENST00000264039 PCMTD1Q96MG8 357 aaPredicted RBP18.75■□□□□ 0.59
GPC1-201ENST00000264039 SPECC1Q5M775 1068 aa18.75■□□□□ 0.59
GPC1-201ENST00000264039 CNNM3Q8NE01 707 aa18.75■□□□□ 0.59
GPC1-201ENST00000264039 CHPF2Q9P2E5 772 aa18.75■□□□□ 0.59
GPC1-201ENST00000264039 FAM135BQ49AJ0 1406 aa18.75■□□□□ 0.59
GPC1-201ENST00000264039 MYL6BP14649 208 aa18.75■□□□□ 0.59
GPC1-201ENST00000264039 TSR1Q2NL82 804 aaKnown RBP18.75■□□□□ 0.59
GPC1-201ENST00000264039 CCDC61Q9Y6R9 512 aa18.75■□□□□ 0.59
GPC1-201ENST00000264039 EFCAB8A8MWE9 144 aa18.74■□□□□ 0.59
GPC1-201ENST00000264039 KIAA0754O94854 1291 aa18.74■□□□□ 0.59
GPC1-201ENST00000264039 SYKP43405 635 aa18.74■□□□□ 0.59
GPC1-201ENST00000264039 NYAP1Q6ZVC0 841 aa18.74■□□□□ 0.59
GPC1-201ENST00000264039 RASSF8Q8NHQ8 419 aa18.74■□□□□ 0.59
GPC1-201ENST00000264039 GIMAP7Q8NHV1 300 aa18.74■□□□□ 0.59
GPC1-201ENST00000264039 MAST1Q9Y2H9 1570 aa18.74■□□□□ 0.59
GPC1-201ENST00000264039 FBXO31Q5XUX0 539 aaPredicted RBP18.74■□□□□ 0.59
GPC1-201ENST00000264039 NDUFA8P51970 172 aa18.74■□□□□ 0.59
GPC1-201ENST00000264039 MYCBPQ99417 103 aaPredicted RBP18.74■□□□□ 0.59
GPC1-201ENST00000264039 MATR3P43243 847 aaKnown RBP eCLIP18.73■□□□□ 0.59
GPC1-201ENST00000264039 STX17P56962 302 aa18.73■□□□□ 0.59
GPC1-201ENST00000264039 RNF187Q5TA31 235 aaPredicted RBP18.73■□□□□ 0.59
GPC1-201ENST00000264039 ARMCX5Q6P1M9 558 aa18.73■□□□□ 0.59
GPC1-201ENST00000264039 CC2D1AQ6P1N0 951 aaPredicted RBP18.73■□□□□ 0.59
GPC1-201ENST00000264039 CAPZA3Q96KX2 299 aa18.73■□□□□ 0.59
GPC1-201ENST00000264039 STAP2Q9UGK3 403 aa18.73■□□□□ 0.59
GPC1-201ENST00000264039 TAF6LQ9Y6J9 622 aa18.73■□□□□ 0.59
GPC1-201ENST00000264039 ELP1O95163 1332 aa18.73■□□□□ 0.59
GPC1-201ENST00000264039 IQCB1Q15051 598 aa18.73■□□□□ 0.59
GPC1-201ENST00000264039 HDXQ7Z353 690 aa18.73■□□□□ 0.59
GPC1-201ENST00000264039 EFCC1Q9HA90 598 aa18.73■□□□□ 0.59
GPC1-201ENST00000264039 GNAT3A8MTJ3 354 aa18.73■□□□□ 0.59
GPC1-201ENST00000264039 SPTLC2O15270 562 aa18.73■□□□□ 0.59
GPC1-201ENST00000264039 CT47A1Q5JQC4 288 aaPredicted RBP18.73■□□□□ 0.59
GPC1-201ENST00000264039 TTC19Q6DKK2 380 aaPredicted RBP18.73■□□□□ 0.59
GPC1-201ENST00000264039 TRMT44Q8IYL2 757 aaKnown RBP18.73■□□□□ 0.59
GPC1-201ENST00000264039 DHX58Q96C10 678 aa18.73■□□□□ 0.59
GPC1-201ENST00000264039 IRX2Q9BZI1 471 aaPredicted RBP18.73■□□□□ 0.59
GPC1-201ENST00000264039 GOLPH3LQ9H4A5 285 aa18.73■□□□□ 0.59
GPC1-201ENST00000264039 NEXNQ0ZGT2 675 aa18.72■□□□□ 0.59
GPC1-201ENST00000264039 NBPF11Q86T75 865 aa18.72■□□□□ 0.59
GPC1-201ENST00000264039 GPR161Q8N6U8 529 aaKnown RBP18.72■□□□□ 0.59
GPC1-201ENST00000264039 SECISBP2LQ93073 1101 aaKnown RBP18.72■□□□□ 0.59
GPC1-201ENST00000264039 RPGRIP1LQ68CZ1 1315 aa18.72■□□□□ 0.59
GPC1-201ENST00000264039 SLFNL1Q499Z3 407 aa18.72■□□□□ 0.59
GPC1-201ENST00000264039 FBXO18Q8NFZ0 1043 aa18.72■□□□□ 0.59
GPC1-201ENST00000264039 SUGCTQ9HAC7 445 aa18.72■□□□□ 0.59
GPC1-201ENST00000264039 PPP2R2CQ9Y2T4 447 aa18.72■□□□□ 0.59
GPC1-201ENST00000264039 DNA2P51530 1060 aa18.72■□□□□ 0.59
GPC1-201ENST00000264039 CCDC158Q5M9N0 1113 aa18.72■□□□□ 0.59
GPC1-201ENST00000264039 PI4K2BQ8TCG2 481 aa18.72■□□□□ 0.59
GPC1-201ENST00000264039 BICC1Q9H694 974 aaKnown RBP18.72■□□□□ 0.59
GPC1-201ENST00000264039 KIAA1468Q9P260 1216 aa18.72■□□□□ 0.59
GPC1-201ENST00000264039 TTC37Q6PGP7 1564 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 SRLQ86TD4 932 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 BANK1Q8NDB2 785 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 ATP10DQ9P241 1426 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 ATP2C2O75185 946 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 ZNF202O95125 648 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 RXRAP19793 462 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 FKBP4Q02790 459 aaKnown RBP eCLIP18.71■□□□□ 0.59
GPC1-201ENST00000264039 COL9A3Q14050 684 aaPredicted RBP18.71■□□□□ 0.59
GPC1-201ENST00000264039 ANKRD20A12PQ8NF67 263 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 CTAGE15A4D2H0 777 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 IPO7O95373 1038 aaKnown RBP18.71■□□□□ 0.59
GPC1-201ENST00000264039 CTAGE8P0CG41 777 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 CPLX2Q6PUV4 134 aaKnown RBP18.71■□□□□ 0.59
GPC1-201ENST00000264039 CTAGE6Q86UF2 777 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 CTAGE4Q8IX94 777 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 PPM1EQ8WY54 764 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 PCDHA7Q9UN72 937 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 MAP3K2Q9Y2U5 619 aa18.71■□□□□ 0.59
GPC1-201ENST00000264039 EIF3CLB5ME19 914 aaKnown RBP18.7■□□□□ 0.58
GPC1-201ENST00000264039 EIF3CQ99613 913 aaKnown RBP18.7■□□□□ 0.58
GPC1-201ENST00000264039 RGS22Q8NE09 1264 aa18.7■□□□□ 0.58
GPC1-201ENST00000264039 GJB4Q9NTQ9 266 aa18.7■□□□□ 0.58
GPC1-201ENST00000264039 IMPACTQ9P2X3 320 aa18.7■□□□□ 0.58
GPC1-201ENST00000264039 SSH2Q76I76 1423 aa18.7■□□□□ 0.58
GPC1-201ENST00000264039 PSDA5PKW4 1024 aaPredicted RBP18.69■□□□□ 0.58
GPC1-201ENST00000264039 GOLGA8BA8MQT2 603 aa18.69■□□□□ 0.58
GPC1-201ENST00000264039 ZMYND10O75800 440 aa18.69■□□□□ 0.58
GPC1-201ENST00000264039 H2AFXP16104 143 aaPredicted RBP18.69■□□□□ 0.58
GPC1-201ENST00000264039 CDC25BP30305 580 aa18.69■□□□□ 0.58
GPC1-201ENST00000264039 TRDNQ13061 729 aa18.69■□□□□ 0.58
GPC1-201ENST00000264039 CCDC70Q6NSX1 233 aa18.69■□□□□ 0.58
GPC1-201ENST00000264039 WDR24Q96S15 920 aa18.69■□□□□ 0.58
GPC1-201ENST00000264039 FANCLQ9NW38 375 aa18.69■□□□□ 0.58
GPC1-201ENST00000264039 SBNO2Q9Y2G9 1366 aa18.69■□□□□ 0.58
GPC1-201ENST00000264039 SAMD9LQ8IVG5 1584 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms