RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 TBC1D9BQ66K14 1250 aa19.08■□□□□ 0.64
VPS26A-201ENST00000263559 KBTBD3Q8NAB2 608 aa19.08■□□□□ 0.64
VPS26A-201ENST00000263559 CHMP5Q9NZZ3 219 aa19.08■□□□□ 0.64
VPS26A-201ENST00000263559 RGL2O15211 777 aa19.07■□□□□ 0.64
VPS26A-201ENST00000263559 CHGBP05060 677 aa19.07■□□□□ 0.64
VPS26A-201ENST00000263559 HSP90B1P14625 803 aaKnown RBP19.07■□□□□ 0.64
VPS26A-201ENST00000263559 SNX14Q9Y5W7 946 aa19.07■□□□□ 0.64
VPS26A-201ENST00000263559 CCDC152Q4G0S7 254 aa19.07■□□□□ 0.64
VPS26A-201ENST00000263559 RASEFQ8IZ41 740 aa19.07■□□□□ 0.64
VPS26A-201ENST00000263559 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.07■□□□□ 0.64
VPS26A-201ENST00000263559 RFX7Q2KHR2 1363 aa19.06■□□□□ 0.64
VPS26A-201ENST00000263559 MED23Q9ULK4 1368 aa19.06■□□□□ 0.64
VPS26A-201ENST00000263559 LRP5O75197 1615 aa19.06■□□□□ 0.64
VPS26A-201ENST00000263559 ERFEQ4G0M1 354 aa19.06■□□□□ 0.64
VPS26A-201ENST00000263559 TTC39AQ5SRH9 613 aa19.06■□□□□ 0.64
VPS26A-201ENST00000263559 C4BP0C0L5 1744 aa19.06■□□□□ 0.64
VPS26A-201ENST00000263559 ZPR1O75312 459 aa19.06■□□□□ 0.64
VPS26A-201ENST00000263559 PDE8BO95263 885 aa19.06■□□□□ 0.64
VPS26A-201ENST00000263559 KRT27Q7Z3Y8 459 aa19.06■□□□□ 0.64
VPS26A-201ENST00000263559 ZNF589Q86UQ0 364 aaPredicted RBP19.06■□□□□ 0.64
VPS26A-201ENST00000263559 ARHGEF1Q92888 912 aaKnown RBP19.06■□□□□ 0.64
VPS26A-201ENST00000263559 MAP4K1Q92918 833 aa19.05■□□□□ 0.64
VPS26A-201ENST00000263559 UPF3BQ9BZI7 483 aaKnown RBP19.05■□□□□ 0.64
VPS26A-201ENST00000263559 LRRC4BQ9NT99 713 aa19.05■□□□□ 0.64
VPS26A-201ENST00000263559 FRAT2O75474 233 aaPredicted RBP19.05■□□□□ 0.64
VPS26A-201ENST00000263559 FAM196AQ6ZSG2 479 aa19.05■□□□□ 0.64
VPS26A-201ENST00000263559 SPEF2Q9C093 1822 aa19.04■□□□□ 0.64
VPS26A-201ENST00000263559 NECTIN1Q15223 517 aa19.04■□□□□ 0.64
VPS26A-201ENST00000263559 PRPF40BQ6NWY9 871 aaKnown RBP19.04■□□□□ 0.64
VPS26A-201ENST00000263559 HELBQ8NG08 1087 aaPredicted RBP19.04■□□□□ 0.64
VPS26A-201ENST00000263559 MPHOSPH8Q99549 860 aa19.04■□□□□ 0.64
VPS26A-201ENST00000263559 RBM8AQ9Y5S9 174 aaKnown RBP19.04■□□□□ 0.64
VPS26A-201ENST00000263559 RTL9Q8NET4 1388 aa19.04■□□□□ 0.64
VPS26A-201ENST00000263559 MROH5Q6ZUA9 1318 aa19.03■□□□□ 0.64
VPS26A-201ENST00000263559 CASZ1Q86V15 1759 aa19.03■□□□□ 0.64
VPS26A-201ENST00000263559 FKBP4Q02790 459 aaKnown RBP eCLIP19.03■□□□□ 0.64
VPS26A-201ENST00000263559 SEC62Q99442 399 aaKnown RBP19.03■□□□□ 0.64
VPS26A-201ENST00000263559 SCARF1Q14162 830 aa19.03■□□□□ 0.64
VPS26A-201ENST00000263559 C3orf67Q6ZVT6 689 aa19.02■□□□□ 0.64
VPS26A-201ENST00000263559 KCNB2Q92953 911 aa19.02■□□□□ 0.64
VPS26A-201ENST00000263559 SETDB2Q96T68 719 aa19.02■□□□□ 0.64
VPS26A-201ENST00000263559 EP400Q96L91 3159 aa19.02■□□□□ 0.64
VPS26A-201ENST00000263559 TAF5LO75529 589 aa19.02■□□□□ 0.63
VPS26A-201ENST00000263559 PHF14O94880 888 aa19.02■□□□□ 0.63
VPS26A-201ENST00000263559 C4AP0C0L4 1744 aa19.01■□□□□ 0.63
VPS26A-201ENST00000263559 GTF2E1P29083 439 aaPredicted RBP19.01■□□□□ 0.63
VPS26A-201ENST00000263559 KCNJ4P48050 445 aa19.01■□□□□ 0.63
VPS26A-201ENST00000263559 SLFNL1Q499Z3 407 aa19.01■□□□□ 0.63
VPS26A-201ENST00000263559 MCMDC2Q4G0Z9 681 aa19.01■□□□□ 0.63
VPS26A-201ENST00000263559 TRAPPC3LQ5T215 181 aa19.01■□□□□ 0.63
VPS26A-201ENST00000263559 TRIM37O94972 964 aa19.01■□□□□ 0.63
VPS26A-201ENST00000263559 IGHMBP2P38935 993 aaKnown RBP19.01■□□□□ 0.63
VPS26A-201ENST00000263559 MCM2P49736 904 aa19.01■□□□□ 0.63
VPS26A-201ENST00000263559 CCDC129Q6ZRS4 1044 aa19.01■□□□□ 0.63
VPS26A-201ENST00000263559 AKAP11Q9UKA4 1901 aa19.01■□□□□ 0.63
VPS26A-201ENST00000263559 ABCC12Q96J65 1359 aa19■□□□□ 0.63
VPS26A-201ENST00000263559 COL4A1P02462 1669 aa19■□□□□ 0.63
VPS26A-201ENST00000263559 FGFR2P21802 821 aa19■□□□□ 0.63
VPS26A-201ENST00000263559 PUM3Q15397 648 aaKnown RBP19■□□□□ 0.63
VPS26A-201ENST00000263559 CREB3L3Q68CJ9 461 aa19■□□□□ 0.63
VPS26A-201ENST00000263559 TICAM2Q86XR7 235 aa19■□□□□ 0.63
VPS26A-201ENST00000263559 CIZ1Q9ULV3 898 aaPredicted RBP19■□□□□ 0.63
VPS26A-201ENST00000263559 TAF1P21675 1872 aa19■□□□□ 0.63
VPS26A-201ENST00000263559 COL24A1Q17RW2 1714 aa19■□□□□ 0.63
VPS26A-201ENST00000263559 RFC4P35249 363 aa19■□□□□ 0.63
VPS26A-201ENST00000263559 ZAP70P43403 619 aa19■□□□□ 0.63
VPS26A-201ENST00000263559 SF3B3Q15393 1217 aaKnown RBP19■□□□□ 0.63
VPS26A-201ENST00000263559 SLC10A5Q5PT55 438 aa19■□□□□ 0.63
VPS26A-201ENST00000263559 LPIN2Q92539 896 aa19■□□□□ 0.63
VPS26A-201ENST00000263559 ADCK5Q3MIX3 580 aa18.99■□□□□ 0.63
VPS26A-201ENST00000263559 PI16Q6UXB8 463 aa18.99■□□□□ 0.63
VPS26A-201ENST00000263559 TMX3Q96JJ7 454 aa18.99■□□□□ 0.63
VPS26A-201ENST00000263559 NYXQ9GZU5 481 aa18.99■□□□□ 0.63
VPS26A-201ENST00000263559 MCAMP43121 646 aa18.99■□□□□ 0.63
VPS26A-201ENST00000263559 SNAP23O00161 211 aa18.98■□□□□ 0.63
VPS26A-201ENST00000263559 SLC27A2O14975 620 aa18.98■□□□□ 0.63
VPS26A-201ENST00000263559 RNF113AO15541 343 aaKnown RBP18.98■□□□□ 0.63
VPS26A-201ENST00000263559 ZMYM1Q5SVZ6 1142 aa18.98■□□□□ 0.63
VPS26A-201ENST00000263559 NOL8Q76FK4 1167 aaKnown RBP18.98■□□□□ 0.63
VPS26A-201ENST00000263559 NBPF5PQ86XG9 351 aaPredicted RBP18.98■□□□□ 0.63
VPS26A-201ENST00000263559 ZNF512BQ96KM6 892 aaPredicted RBP18.98■□□□□ 0.63
VPS26A-201ENST00000263559 HELLSQ9NRZ9 838 aa18.98■□□□□ 0.63
VPS26A-201ENST00000263559 ARAP2Q8WZ64 1704 aa18.98■□□□□ 0.63
VPS26A-201ENST00000263559 RBM6P78332 1123 aaKnown RBP18.98■□□□□ 0.63
VPS26A-201ENST00000263559 ZNF772Q68DY9 489 aaPredicted RBP18.98■□□□□ 0.63
VPS26A-201ENST00000263559 IL27Q8NEV9 243 aa18.98■□□□□ 0.63
VPS26A-201ENST00000263559 CDC5LQ99459 802 aaKnown RBP18.98■□□□□ 0.63
VPS26A-201ENST00000263559 ZKSCAN1P17029 563 aaPredicted RBP18.97■□□□□ 0.63
VPS26A-201ENST00000263559 CASTP20810 708 aaKnown RBP18.97■□□□□ 0.63
VPS26A-201ENST00000263559 SSFA2P28290 1259 aa18.97■□□□□ 0.63
VPS26A-201ENST00000263559 CCDC102BQ68D86 513 aa18.97■□□□□ 0.63
VPS26A-201ENST00000263559 TTC14Q96N46 770 aa18.97■□□□□ 0.63
VPS26A-201ENST00000263559 CPA1P15085 419 aa18.97■□□□□ 0.63
VPS26A-201ENST00000263559 PHKA1P46020 1223 aa18.97■□□□□ 0.63
VPS26A-201ENST00000263559 JAKMIP1Q96N16 626 aaKnown RBP18.97■□□□□ 0.63
VPS26A-201ENST00000263559 UBR3Q6ZT12 1888 aa18.97■□□□□ 0.63
VPS26A-201ENST00000263559 TPTE2Q6XPS3 522 aa18.97■□□□□ 0.63
VPS26A-201ENST00000263559 ZGPATQ8N5A5 531 aaKnown RBP18.97■□□□□ 0.63
VPS26A-201ENST00000263559 SLC5A1P13866 664 aa18.96■□□□□ 0.63
VPS26A-201ENST00000263559 CHRNDQ07001 517 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms